EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100000135 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 11383 bases
Position: chrJH172444.1:121892-133274
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100000152	MBD	PF01429.19	8.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100000176	MBD4-201	4537	-	ENSHGLP00100000152	567 (aa)	-	UPI00035008F4
ENSHGLT00100000177	MBD4-202	534	-	ENSHGLP00100000153	177 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100000135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100000135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100000135	MBD4	99	73.205	ENSG00000129071	MBD4	97	92.778	Homo_sapiens
ENSHGLG00100000135	MBD4	62	51.863	ENSAPOG00000021668	mbd4	77	51.863	Acanthochromis_polyacanthus
ENSHGLG00100000135	MBD4	100	70.855	ENSAMEG00000004562	MBD4	99	70.855	Ailuropoda_melanoleuca
ENSHGLG00100000135	MBD4	69	50.877	ENSAOCG00000001157	mbd4	85	50.877	Amphiprion_ocellaris
ENSHGLG00100000135	MBD4	87	42.000	ENSATEG00000014594	MBD4	87	42.000	Anabas_testudineus
ENSHGLG00100000135	MBD4	69	79.769	ENSACAG00000014733	MBD4	69	79.769	Anolis_carolinensis
ENSHGLG00100000135	MBD4	100	65.794	ENSBTAG00000021645	MBD4	100	65.794	Bos_taurus
ENSHGLG00100000135	MBD4	100	70.332	ENSCJAG00000017293	MBD4	99	70.332	Callithrix_jacchus
ENSHGLG00100000135	MBD4	100	70.087	ENSCAFG00000004867	MBD4	99	70.087	Canis_familiaris
ENSHGLG00100000135	MBD4	100	70.087	ENSCAFG00020007082	MBD4	99	70.087	Canis_lupus_dingo
ENSHGLG00100000135	MBD4	100	65.157	ENSCHIG00000009760	MBD4	100	65.157	Capra_hircus
ENSHGLG00100000135	MBD4	98	71.813	ENSCCAG00000029796	MBD4	96	71.813	Cebus_capucinus
ENSHGLG00100000135	MBD4	99	71.831	ENSCATG00000035211	MBD4	98	71.831	Cercocebus_atys
ENSHGLG00100000135	MBD4	100	82.746	ENSCLAG00000008974	MBD4	100	82.746	Chinchilla_lanigera
ENSHGLG00100000135	MBD4	98	72.531	ENSCSAG00000009037	MBD4	96	72.531	Chlorocebus_sabaeus
ENSHGLG00100000135	MBD4	88	49.240	ENSCPBG00000014704	MBD4	90	49.240	Chrysemys_picta_bellii
ENSHGLG00100000135	MBD4	98	73.250	ENSCANG00000007120	MBD4	96	73.250	Colobus_angolensis_palliatus
ENSHGLG00100000135	MBD4	100	65.324	ENSCGRG00001003507	Mbd4	100	65.499	Cricetulus_griseus_chok1gshd
ENSHGLG00100000135	MBD4	100	65.324	ENSCGRG00000010974	Mbd4	100	65.499	Cricetulus_griseus_crigri
ENSHGLG00100000135	MBD4	100	68.357	ENSDNOG00000049619	MBD4	100	68.357	Dasypus_novemcinctus
ENSHGLG00100000135	MBD4	79	62.222	ENSDORG00000000902	-	92	62.222	Dipodomys_ordii
ENSHGLG00100000135	MBD4	50	58.333	ENSEBUG00000010816	mbd4	64	58.333	Eptatretus_burgeri
ENSHGLG00100000135	MBD4	100	73.519	ENSEASG00005014800	MBD4	100	73.519	Equus_asinus_asinus
ENSHGLG00100000135	MBD4	100	72.997	ENSECAG00000022106	MBD4	100	72.997	Equus_caballus
ENSHGLG00100000135	MBD4	92	63.218	ENSEEUG00000011459	MBD4	96	63.218	Erinaceus_europaeus
ENSHGLG00100000135	MBD4	100	71.553	ENSFCAG00000000083	MBD4	99	71.553	Felis_catus
ENSHGLG00100000135	MBD4	83	41.803	ENSFALG00000013663	MBD4	99	41.107	Ficedula_albicollis
ENSHGLG00100000135	MBD4	54	58.039	ENSGMOG00000013830	mbd4	64	58.039	Gadus_morhua
ENSHGLG00100000135	MBD4	89	49.618	ENSGAGG00000018644	MBD4	91	49.618	Gopherus_agassizii
ENSHGLG00100000135	MBD4	98	73.118	ENSGGOG00000010698	MBD4	98	72.232	Gorilla_gorilla
ENSHGLG00100000135	MBD4	100	99.824	ENSHGLG00000009034	MBD4	100	99.824	Heterocephalus_glaber_female
ENSHGLG00100000135	MBD4	100	69.686	ENSSTOG00000020663	MBD4	100	69.686	Ictidomys_tridecemlineatus
ENSHGLG00100000135	MBD4	95	70.902	ENSLAFG00000010609	MBD4	94	70.902	Loxodonta_africana
ENSHGLG00100000135	MBD4	99	71.831	ENSMFAG00000002266	MBD4	98	71.831	Macaca_fascicularis
ENSHGLG00100000135	MBD4	99	71.579	ENSMMUG00000012723	MBD4	98	71.579	Macaca_mulatta
ENSHGLG00100000135	MBD4	95	70.221	ENSMNEG00000029752	MBD4	98	70.221	Macaca_nemestrina
ENSHGLG00100000135	MBD4	98	72.352	ENSMLEG00000024859	MBD4	98	71.479	Mandrillus_leucophaeus
ENSHGLG00100000135	MBD4	100	72.775	ENSMICG00000008022	MBD4	99	72.775	Microcebus_murinus
ENSHGLG00100000135	MBD4	68	47.449	ENSMOCG00000002466	-	97	47.449	Microtus_ochrogaster
ENSHGLG00100000135	MBD4	88	56.914	ENSMODG00000006399	-	99	56.914	Monodelphis_domestica
ENSHGLG00100000135	MBD4	87	43.452	ENSMALG00000021517	mbd4	87	43.452	Monopterus_albus
ENSHGLG00100000135	MBD4	100	64.974	MGP_CAROLIEiJ_G0028760	Mbd4	100	64.974	Mus_caroli
ENSHGLG00100000135	MBD4	100	65.079	ENSMUSG00000030322	Mbd4	100	65.079	Mus_musculus
ENSHGLG00100000135	MBD4	100	65.035	MGP_PahariEiJ_G0022511	-	100	65.035	Mus_pahari
ENSHGLG00100000135	MBD4	100	64.198	MGP_SPRETEiJ_G0029788	Mbd4	100	64.198	Mus_spretus
ENSHGLG00100000135	MBD4	100	68.935	ENSMPUG00000017195	MBD4	99	68.935	Mustela_putorius_furo
ENSHGLG00100000135	MBD4	95	73.801	ENSMLUG00000014766	MBD4	99	73.801	Myotis_lucifugus
ENSHGLG00100000135	MBD4	99	73.111	ENSNLEG00000005337	MBD4	98	73.111	Nomascus_leucogenys
ENSHGLG00100000135	MBD4	100	60.000	ENSOPRG00000000473	MBD4	99	60.000	Ochotona_princeps
ENSHGLG00100000135	MBD4	86	42.406	ENSONIG00000017212	mbd4	99	42.406	Oreochromis_niloticus
ENSHGLG00100000135	MBD4	68	45.802	ENSOANG00000004589	-	89	45.802	Ornithorhynchus_anatinus
ENSHGLG00100000135	MBD4	100	63.258	ENSOCUG00000013006	MBD4	99	63.258	Oryctolagus_cuniculus
ENSHGLG00100000135	MBD4	100	67.365	ENSOGAG00000010236	MBD4	100	67.365	Otolemur_garnettii
ENSHGLG00100000135	MBD4	100	65.505	ENSOARG00000014699	MBD4	100	65.505	Ovis_aries
ENSHGLG00100000135	MBD4	99	72.329	ENSPPAG00000036528	MBD4	98	72.329	Pan_paniscus
ENSHGLG00100000135	MBD4	100	70.157	ENSPPRG00000016480	MBD4	99	70.157	Panthera_pardus
ENSHGLG00100000135	MBD4	99	72.855	ENSPTRG00000015377	MBD4	98	72.855	Pan_troglodytes
ENSHGLG00100000135	MBD4	98	73.250	ENSPANG00000015047	MBD4	96	73.250	Papio_anubis
ENSHGLG00100000135	MBD4	88	48.577	ENSPSIG00000007892	MBD4	88	48.577	Pelodiscus_sinensis
ENSHGLG00100000135	MBD4	94	57.542	ENSPEMG00000006226	Mbd4	99	57.542	Peromyscus_maniculatus_bairdii
ENSHGLG00100000135	MBD4	93	55.849	ENSPCIG00000002276	-	100	55.849	Phascolarctos_cinereus
ENSHGLG00100000135	MBD4	99	72.105	ENSPPYG00000013417	MBD4	98	72.105	Pongo_abelii
ENSHGLG00100000135	MBD4	90	68.288	ENSPCAG00000012915	MBD4	93	68.288	Procavia_capensis
ENSHGLG00100000135	MBD4	100	73.693	ENSPVAG00000005238	MBD4	99	73.693	Pteropus_vampyrus
ENSHGLG00100000135	MBD4	97	65.343	ENSRNOG00000010919	Mbd4	96	65.343	Rattus_norvegicus
ENSHGLG00100000135	MBD4	98	73.070	ENSRBIG00000027722	MBD4	96	73.070	Rhinopithecus_bieti
ENSHGLG00100000135	MBD4	98	72.890	ENSRROG00000029136	MBD4	96	72.890	Rhinopithecus_roxellana
ENSHGLG00100000135	MBD4	99	71.076	ENSSBOG00000016810	MBD4	98	71.076	Saimiri_boliviensis_boliviensis
ENSHGLG00100000135	MBD4	96	54.098	ENSSHAG00000012953	MBD4	96	54.098	Sarcophilus_harrisii
ENSHGLG00100000135	MBD4	54	63.900	ENSSDUG00000001365	mbd4	62	63.900	Seriola_dumerili
ENSHGLG00100000135	MBD4	82	55.579	ENSSARG00000004496	-	80	55.579	Sorex_araneus
ENSHGLG00100000135	MBD4	87	51.176	ENSSPUG00000017344	MBD4	91	51.176	Sphenodon_punctatus
ENSHGLG00100000135	MBD4	100	68.467	ENSSSCG00000033303	MBD4	100	68.467	Sus_scrofa
ENSHGLG00100000135	MBD4	86	39.921	ENSTNIG00000017927	mbd4	99	39.921	Tetraodon_nigroviridis
ENSHGLG00100000135	MBD4	87	60.550	ENSTBEG00000003041	-	86	60.550	Tupaia_belangeri
ENSHGLG00100000135	MBD4	96	72.263	ENSTTRG00000011265	MBD4	98	72.263	Tursiops_truncatus
ENSHGLG00100000135	MBD4	88	74.600	ENSUAMG00000000814	MBD4	100	74.600	Ursus_americanus
ENSHGLG00100000135	MBD4	100	71.204	ENSUMAG00000017542	MBD4	100	71.204	Ursus_maritimus
ENSHGLG00100000135	MBD4	62	66.332	ENSVPAG00000004040	-	64	66.332	Vicugna_pacos
ENSHGLG00100000135	MBD4	100	70.087	ENSVVUG00000014222	MBD4	99	70.087	Vulpes_vulpes
ENSHGLG00100000135	MBD4	50	61.667	ENSXMAG00000021129	mbd4	65	61.667	Xiphophorus_maculatus