EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100000160 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 1640 bases
Position: chrJH171875.1:494651-496290
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100000187	SM-ATX	PF14438.6	8.6e-09	1	1
ENSHGLP00100000187	LSM14	PF12701.7	2.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100000212	-	384	-	ENSHGLP00100000187	127 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100000160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100000160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100000160	-	76	96.907	ENSHGLG00100017085	-	97	96.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100000160	-	77	100.000	ENSG00000257103	LSM14A	94	100.000	Homo_sapiens
ENSHGLG00100000160	-	80	88.119	ENSAPEG00000012119	lsm14aa	96	87.255	Amphiprion_percula
ENSHGLG00100000160	-	77	100.000	ENSANAG00000019299	-	94	100.000	Aotus_nancymaae
ENSHGLG00100000160	-	77	81.633	ENSANAG00000031175	-	94	81.053	Aotus_nancymaae
ENSHGLG00100000160	-	65	92.771	ENSACLG00000018221	-	82	92.771	Astatotilapia_calliptera
ENSHGLG00100000160	-	77	100.000	ENSCJAG00000010360	LSM14A	94	100.000	Callithrix_jacchus
ENSHGLG00100000160	-	78	96.970	ENSCCAG00000028536	-	99	96.970	Cebus_capucinus
ENSHGLG00100000160	-	77	89.796	ENSCCAG00000038098	-	100	85.149	Cebus_capucinus
ENSHGLG00100000160	-	77	85.714	ENSCCAG00000037290	-	90	85.714	Cebus_capucinus
ENSHGLG00100000160	-	75	89.474	ENSCSEG00000021457	lsm14aa	93	89.474	Cynoglossus_semilaevis
ENSHGLG00100000160	-	77	96.939	ENSDARG00000006600	lsm14aa	98	97.590	Danio_rerio
ENSHGLG00100000160	-	87	74.545	ENSEBUG00000012576	LSM14A	56	74.545	Eptatretus_burgeri
ENSHGLG00100000160	-	75	100.000	ENSGAGG00000016098	-	87	100.000	Gopherus_agassizii
ENSHGLG00100000160	-	68	88.372	ENSHCOG00000009227	-	85	88.372	Hippocampus_comes
ENSHGLG00100000160	-	63	98.750	ENSHCOG00000001089	-	81	98.750	Hippocampus_comes
ENSHGLG00100000160	-	89	81.897	ENSLBEG00000010487	lsm14aa	100	81.897	Labrus_bergylta
ENSHGLG00100000160	-	75	93.684	ENSMZEG00005005945	-	68	93.684	Maylandia_zebra
ENSHGLG00100000160	-	58	95.946	ENSMMOG00000016341	-	84	95.946	Mola_mola
ENSHGLG00100000160	-	78	91.919	ENSNLEG00000034705	-	81	91.919	Nomascus_leucogenys
ENSHGLG00100000160	-	75	94.737	ENSORLG00000028980	-	82	93.814	Oryzias_latipes
ENSHGLG00100000160	-	76	93.814	ENSORLG00020019931	-	82	93.814	Oryzias_latipes_hni
ENSHGLG00100000160	-	78	60.000	ENSORLG00015018292	-	96	60.000	Oryzias_latipes_hsok
ENSHGLG00100000160	-	77	92.857	ENSOMEG00000016637	-	60	92.857	Oryzias_melastigma
ENSHGLG00100000160	-	75	98.947	ENSPTRG00000040949	-	98	96.875	Pan_troglodytes
ENSHGLG00100000160	-	75	91.579	ENSPMGG00000000220	lsm14aa	91	91.579	Periophthalmus_magnuspinnatus
ENSHGLG00100000160	-	61	96.104	ENSPMGG00000007198	-	72	96.104	Periophthalmus_magnuspinnatus
ENSHGLG00100000160	-	80	87.255	ENSPCOG00000016240	-	100	90.426	Propithecus_coquereli
ENSHGLG00100000160	-	76	100.000	ENSSBOG00000020141	-	94	98.958	Saimiri_boliviensis_boliviensis
ENSHGLG00100000160	-	89	78.761	ENSSBOG00000021178	-	76	78.761	Saimiri_boliviensis_boliviensis
ENSHGLG00100000160	-	80	77.451	ENSSBOG00000023312	-	100	77.451	Saimiri_boliviensis_boliviensis
ENSHGLG00100000160	-	61	94.805	ENSTRUG00000024267	-	53	94.805	Takifugu_rubripes
ENSHGLG00100000160	-	77	100.000	ENSUAMG00000017314	LSM14A	88	96.078	Ursus_americanus
ENSHGLG00100000160	-	69	75.000	ENSUMAG00000004345	-	91	75.000	Ursus_maritimus