EuRBPDB

Description
Ensembl ID
ENSHGLG00100000241 (Gene tree)
Gene ID
-
Gene Symbol
LSM12
Alias
FLJ30656
Full Name
LSM12 homolog
Gene Type
protein_coding
Species
Heterocephalus_glaber_male
Status
putative
Strand
Plus strand
Length
17699 bases
Position
chrJH171123.1:57425-75123
Accession
26407
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSHGLP00100000280ADPF09793.91.9e-2411
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSHGLT00100000307LSM12-2012891-ENSHGLP00100000280188 (aa)-UPI00034FEBE5
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSHGLG00100000241LSM129687.293ENSG00000161654LSM129187.293Homo_sapiens
ENSHGLG00100000241LSM128285.714ENSAPOG00000007907lsm12b7985.714Acanthochromis_polyacanthus
ENSHGLG00100000241LSM129688.398ENSAMEG00000018321LSM129188.398Ailuropoda_melanoleuca
ENSHGLG00100000241LSM128283.766ENSACIG00000008538lsm12b7983.766Amphilophus_citrinellus
ENSHGLG00100000241LSM128285.065ENSAOCG00000021847lsm12b6985.065Amphiprion_ocellaris
ENSHGLG00100000241LSM128285.065ENSAPEG00000002252lsm12b7985.065Amphiprion_percula
ENSHGLG00100000241LSM128284.416ENSATEG00000005705lsm12b7984.416Anabas_testudineus
ENSHGLG00100000241LSM129682.873ENSACAG00000004618LSM129182.873Anolis_carolinensis
ENSHGLG00100000241LSM129687.293ENSANAG00000029011LSM128099.091Aotus_nancymaae
ENSHGLG00100000241LSM128284.416ENSACLG00000026332lsm12b7984.416Astatotilapia_calliptera
ENSHGLG00100000241LSM128284.416ENSAMXG00000032952lsm12b7984.416Astyanax_mexicanus
ENSHGLG00100000241LSM128279.870ENSAMXG00000036117lsm12a7279.870Astyanax_mexicanus
ENSHGLG00100000241LSM129687.293ENSBTAG00000016252LSM129187.293Bos_taurus
ENSHGLG00100000241LSM129687.293ENSCJAG00000048480LSM128099.091Callithrix_jacchus
ENSHGLG00100000241LSM129687.293ENSCAFG00000014379LSM128387.293Canis_familiaris
ENSHGLG00100000241LSM129687.293ENSCAFG00020012173LSM129187.293Canis_lupus_dingo
ENSHGLG00100000241LSM129687.293ENSCHIG00000018175LSM129187.293Capra_hircus
ENSHGLG00100000241LSM129687.293ENSTSYG00000036361LSM129187.293Carlito_syrichta
ENSHGLG00100000241LSM129092.899ENSCAPG00000009647LSM129092.899Cavia_aperea
ENSHGLG00100000241LSM129686.188ENSCPOG00000012860LSM128098.165Cavia_porcellus
ENSHGLG00100000241LSM129687.293ENSCCAG00000032905LSM128099.091Cebus_capucinus
ENSHGLG00100000241LSM129687.293ENSCATG00000030577-8099.091Cercocebus_atys
ENSHGLG00100000241LSM129686.188ENSCLAG00000015759LSM128097.273Chinchilla_lanigera
ENSHGLG00100000241LSM129686.740ENSCSAG00000003486LSM129186.740Chlorocebus_sabaeus
ENSHGLG00100000241LSM125899.083ENSCHOG00000001198LSM1210099.083Choloepus_hoffmanni
ENSHGLG00100000241LSM129681.768ENSCPBG00000027105LSM129181.768Chrysemys_picta_bellii
ENSHGLG00100000241LSM129687.293ENSCANG00000043328LSM128099.091Colobus_angolensis_palliatus
ENSHGLG00100000241LSM129687.293ENSCGRG00001002094Lsm128099.091Cricetulus_griseus_chok1gshd
ENSHGLG00100000241LSM128398.077ENSCGRG00000004316Lsm128898.077Cricetulus_griseus_crigri
ENSHGLG00100000241LSM128283.766ENSCSEG00000008434lsm12b7983.766Cynoglossus_semilaevis
ENSHGLG00100000241LSM128284.416ENSCVAG00000008755lsm12b7984.416Cyprinodon_variegatus
ENSHGLG00100000241LSM128285.065ENSDARG00000109510lsm12b7985.065Danio_rerio
ENSHGLG00100000241LSM128274.675ENSDARG00000028848lsm12a7974.675Danio_rerio
ENSHGLG00100000241LSM129686.740ENSDNOG00000002418LSM128386.740Dasypus_novemcinctus
ENSHGLG00100000241LSM129687.293ENSDORG00000016381Lsm128099.091Dipodomys_ordii
ENSHGLG00100000241LSM128287.662ENSETEG00000011012-8887.662Echinops_telfairi
ENSHGLG00100000241LSM129686.740ENSETEG00000008374LSM129186.740Echinops_telfairi
ENSHGLG00100000241LSM126661.600ENSEBUG00000016299lsm12a7061.600Eptatretus_burgeri
ENSHGLG00100000241LSM129687.293ENSEASG00005010155LSM129187.293Equus_asinus_asinus
ENSHGLG00100000241LSM129687.293ENSECAG00000009071LSM128099.091Equus_caballus
ENSHGLG00100000241LSM128198.693ENSEEUG00000002419-10098.693Erinaceus_europaeus
ENSHGLG00100000241LSM128283.117ENSELUG00000015538lsm12b7877.273Esox_lucius
ENSHGLG00100000241LSM128281.169ENSELUG00000000256-7981.169Esox_lucius
ENSHGLG00100000241LSM129687.293ENSFCAG00000037021LSM129187.293Felis_catus
ENSHGLG00100000241LSM127999.324ENSFDAG00000008954LSM128799.324Fukomys_damarensis
ENSHGLG00100000241LSM128283.117ENSFHEG00000019913lsm12b7983.117Fundulus_heteroclitus
ENSHGLG00100000241LSM128283.766ENSGMOG00000015449lsm12b9783.766Gadus_morhua
ENSHGLG00100000241LSM128194.118ENSGALG00000039803LSM1210094.118Gallus_gallus
ENSHGLG00100000241LSM128283.766ENSGAFG00000011829lsm12b7983.766Gambusia_affinis
ENSHGLG00100000241LSM128284.416ENSGACG00000003428lsm12b9784.416Gasterosteus_aculeatus
ENSHGLG00100000241LSM129682.873ENSGAGG00000021965LSM129182.873Gopherus_agassizii
ENSHGLG00100000241LSM129687.293ENSGGOG00000010589-8099.091Gorilla_gorilla
ENSHGLG00100000241LSM128781.595ENSHBUG00000007667lsm12b7281.595Haplochromis_burtoni
ENSHGLG00100000241LSM129687.293ENSHGLG00000011411LSM128099.091Heterocephalus_glaber_female
ENSHGLG00100000241LSM129672.928ENSHCOG00000002094lsm12b9072.928Hippocampus_comes
ENSHGLG00100000241LSM128174.342ENSIPUG00000008936lsm12a7774.342Ictalurus_punctatus
ENSHGLG00100000241LSM128285.065ENSIPUG00000014800lsm127985.065Ictalurus_punctatus
ENSHGLG00100000241LSM129687.293ENSSTOG00000007403LSM128099.091Ictidomys_tridecemlineatus
ENSHGLG00100000241LSM128074.026ENSJJAG00000014652-8774.026Jaculus_jaculus
ENSHGLG00100000241LSM129776.882ENSJJAG00000011793-9476.882Jaculus_jaculus
ENSHGLG00100000241LSM129686.188ENSJJAG00000004364-8098.182Jaculus_jaculus
ENSHGLG00100000241LSM128285.065ENSLBEG00000027999lsm12b7985.065Labrus_bergylta
ENSHGLG00100000241LSM128191.447ENSLACG00000015981LSM127891.447Latimeria_chalumnae
ENSHGLG00100000241LSM128283.117ENSLOCG00000013079lsm12b7883.117Lepisosteus_oculatus
ENSHGLG00100000241LSM129687.293ENSLAFG00000005202LSM129187.293Loxodonta_africana
ENSHGLG00100000241LSM129687.293ENSMFAG00000031376LSM128099.091Macaca_fascicularis
ENSHGLG00100000241LSM129687.293ENSMMUG00000006804LSM128099.091Macaca_mulatta
ENSHGLG00100000241LSM129687.293ENSMNEG00000030594-8099.091Macaca_nemestrina
ENSHGLG00100000241LSM129687.293ENSMLEG00000039934LSM128099.091Mandrillus_leucophaeus
ENSHGLG00100000241LSM128284.416ENSMAMG00000004279lsm12b7984.416Mastacembelus_armatus
ENSHGLG00100000241LSM128284.416ENSMZEG00005005754lsm12b7984.416Maylandia_zebra
ENSHGLG00100000241LSM129686.740ENSMICG00000037219LSM128098.182Microcebus_murinus
ENSHGLG00100000241LSM129687.293ENSMOCG00000019878-8099.091Microtus_ochrogaster
ENSHGLG00100000241LSM128281.169ENSMOCG00000017015-6781.169Microtus_ochrogaster
ENSHGLG00100000241LSM128284.416ENSMMOG00000020848lsm12b7984.416Mola_mola
ENSHGLG00100000241LSM128285.065ENSMALG00000007578lsm12b7985.065Monopterus_albus
ENSHGLG00100000241LSM129686.740MGP_CAROLIEiJ_G0017241Lsm128098.182Mus_caroli
ENSHGLG00100000241LSM129687.293ENSMUSG00000020922Lsm128099.091Mus_musculus
ENSHGLG00100000241LSM129679.798MGP_PahariEiJ_G0018371Lsm128099.091Mus_pahari
ENSHGLG00100000241LSM129686.740MGP_SPRETEiJ_G0018084Lsm1279100.000Mus_spretus
ENSHGLG00100000241LSM129686.740ENSMLUG00000006391LSM129186.740Myotis_lucifugus
ENSHGLG00100000241LSM129687.293ENSNGAG00000001870Lsm128099.091Nannospalax_galili
ENSHGLG00100000241LSM128074.172ENSNGAG00000015429-7774.172Nannospalax_galili
ENSHGLG00100000241LSM128284.416ENSNBRG00000006266lsm12b7984.416Neolamprologus_brichardi
ENSHGLG00100000241LSM129687.293ENSNLEG00000005580-8099.091Nomascus_leucogenys
ENSHGLG00100000241LSM128082.781ENSMEUG00000007501-8982.781Notamacropus_eugenii
ENSHGLG00100000241LSM129687.293ENSOPRG00000008552LSM129187.293Ochotona_princeps
ENSHGLG00100000241LSM129686.188ENSODEG00000017998-8097.273Octodon_degus
ENSHGLG00100000241LSM129677.901ENSODEG00000007886-6877.901Octodon_degus
ENSHGLG00100000241LSM128284.416ENSONIG00000007933lsm12b7984.416Oreochromis_niloticus
ENSHGLG00100000241LSM128194.118ENSOCUG00000027889-7994.118Oryctolagus_cuniculus
ENSHGLG00100000241LSM129681.667ENSOCUG00000021254-9181.667Oryctolagus_cuniculus
ENSHGLG00100000241LSM129688.398ENSOCUG00000008566-9188.398Oryctolagus_cuniculus
ENSHGLG00100000241LSM129680.556ENSOCUG00000024823-9180.556Oryctolagus_cuniculus
ENSHGLG00100000241LSM128284.416ENSORLG00000011310lsm12b7984.416Oryzias_latipes
ENSHGLG00100000241LSM128284.416ENSORLG00020002060lsm12b7284.416Oryzias_latipes_hni
ENSHGLG00100000241LSM128284.416ENSORLG00015001647lsm12b7284.416Oryzias_latipes_hsok
ENSHGLG00100000241LSM128284.416ENSOMEG00000006184lsm12b7284.416Oryzias_melastigma
ENSHGLG00100000241LSM129686.740ENSOGAG00000010489LSM129186.740Otolemur_garnettii
ENSHGLG00100000241LSM129688.525ENSOARG00000006589LSM129188.525Ovis_aries
ENSHGLG00100000241LSM1281100.000ENSPPAG00000034974-83100.000Pan_paniscus
ENSHGLG00100000241LSM129687.293ENSPPRG00000023420LSM129187.293Panthera_pardus
ENSHGLG00100000241LSM125997.273ENSPTIG00000014850-8097.273Panthera_tigris_altaica
ENSHGLG00100000241LSM1281100.000ENSPTIG00000012704-82100.000Panthera_tigris_altaica
ENSHGLG00100000241LSM129687.293ENSPTRG00000009261LSM128099.091Pan_troglodytes
ENSHGLG00100000241LSM129687.293ENSPANG00000021315-8099.091Papio_anubis
ENSHGLG00100000241LSM128473.418ENSPKIG00000017932-8173.418Paramormyrops_kingsleyae
ENSHGLG00100000241LSM128285.065ENSPKIG00000021058lsm12b7985.065Paramormyrops_kingsleyae
ENSHGLG00100000241LSM128284.416ENSPMGG00000021344lsm12b7984.416Periophthalmus_magnuspinnatus
ENSHGLG00100000241LSM129687.293ENSPEMG00000012199Lsm128099.091Peromyscus_maniculatus_bairdii
ENSHGLG00100000241LSM127165.414ENSPMAG00000005461lsm12a7665.414Petromyzon_marinus
ENSHGLG00100000241LSM129683.978ENSPCIG00000020244LSM129183.978Phascolarctos_cinereus
ENSHGLG00100000241LSM128282.468ENSPFOG00000015930lsm12b7982.468Poecilia_formosa
ENSHGLG00100000241LSM128282.468ENSPLAG00000021089lsm12b7982.468Poecilia_latipinna
ENSHGLG00100000241LSM128282.468ENSPMEG00000012961lsm12b7982.468Poecilia_mexicana
ENSHGLG00100000241LSM128977.326ENSPREG00000010236lsm12b9677.326Poecilia_reticulata
ENSHGLG00100000241LSM129687.293ENSPPYG00000008344LSM129187.293Pongo_abelii
ENSHGLG00100000241LSM128084.768ENSPCAG00000008790LSM129284.768Procavia_capensis
ENSHGLG00100000241LSM129687.293ENSPCOG00000027951LSM128099.091Propithecus_coquereli
ENSHGLG00100000241LSM129686.740ENSPVAG00000013706LSM129186.740Pteropus_vampyrus
ENSHGLG00100000241LSM128284.416ENSPNYG00000003386lsm12b7984.416Pundamilia_nyererei
ENSHGLG00100000241LSM128277.922ENSPNAG00000018435lsm12a7977.922Pygocentrus_nattereri
ENSHGLG00100000241LSM128282.468ENSPNAG00000004186lsm12b7982.468Pygocentrus_nattereri
ENSHGLG00100000241LSM129687.293ENSRNOG00000020894Lsm129187.293Rattus_norvegicus
ENSHGLG00100000241LSM129687.293ENSRBIG00000027910LSM128099.091Rhinopithecus_bieti
ENSHGLG00100000241LSM129687.293ENSRROG00000045530-8099.091Rhinopithecus_roxellana
ENSHGLG00100000241LSM126282.759ENSRROG00000000537-8082.759Rhinopithecus_roxellana
ENSHGLG00100000241LSM126332.061YHR121W-6832.061Saccharomyces_cerevisiae
ENSHGLG00100000241LSM129687.293ENSSBOG00000025310LSM128099.091Saimiri_boliviensis_boliviensis
ENSHGLG00100000241LSM128494.304ENSSHAG00000014914LSM1210094.304Sarcophilus_harrisii
ENSHGLG00100000241LSM128282.468ENSSFOG00015020392lsm12a7982.468Scleropages_formosus
ENSHGLG00100000241LSM128286.364ENSSFOG00015009612lsm127986.364Scleropages_formosus
ENSHGLG00100000241LSM128285.065ENSSMAG00000008089lsm12b7985.065Scophthalmus_maximus
ENSHGLG00100000241LSM128285.714ENSSDUG00000012711lsm12b7985.714Seriola_dumerili
ENSHGLG00100000241LSM128285.714ENSSLDG00000007404lsm12b7985.714Seriola_lalandi_dorsalis
ENSHGLG00100000241LSM128199.346ENSSARG00000005537LSM1210099.346Sorex_araneus
ENSHGLG00100000241LSM129683.425ENSSPUG00000011984LSM129183.425Sphenodon_punctatus
ENSHGLG00100000241LSM128285.065ENSSPAG00000017058lsm12b7985.065Stegastes_partitus
ENSHGLG00100000241LSM129687.293ENSSSCG00000032394LSM129187.293Sus_scrofa
ENSHGLG00100000241LSM128283.117ENSTRUG00000007121lsm12b7983.117Takifugu_rubripes
ENSHGLG00100000241LSM128283.766ENSTNIG00000014436lsm12b7983.766Tetraodon_nigroviridis
ENSHGLG00100000241LSM129686.740ENSTBEG00000012523-9186.740Tupaia_belangeri
ENSHGLG00100000241LSM129683.425ENSTBEG00000012392-9183.425Tupaia_belangeri
ENSHGLG00100000241LSM129687.293ENSTTRG00000010433LSM129187.293Tursiops_truncatus
ENSHGLG00100000241LSM128698.758ENSUAMG00000006313LSM1210098.758Ursus_americanus
ENSHGLG00100000241LSM129394.286ENSUMAG00000012987LSM129994.286Ursus_maritimus
ENSHGLG00100000241LSM129681.215ENSVPAG00000011145LSM129181.215Vicugna_pacos
ENSHGLG00100000241LSM129687.293ENSVVUG00000017581LSM129187.293Vulpes_vulpes
ENSHGLG00100000241LSM127865.753ENSXETG00000003371lsm127265.753Xenopus_tropicalis
ENSHGLG00100000241LSM128283.766ENSXCOG00000003994lsm12b7983.766Xiphophorus_couchianus
ENSHGLG00100000241LSM128283.766ENSXMAG00000020950lsm12b7983.766Xiphophorus_maculatus