EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100000518 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 69537 bases
Position: chrJH174167.1:1979279-2048815
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100000619	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSHGLP00100000619	RRM_1	PF00076.22	4e-37	1	3
ENSHGLP00100000619	RRM_1	PF00076.22	4e-37	2	3
ENSHGLP00100000619	RRM_1	PF00076.22	4e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100000651	A1CF-201	1788	-	ENSHGLP00100000619	595 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100000518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100000518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100000518	A1CF	75	57.301	ENSHGLG00100014028	-	89	68.085
ENSHGLG00100000518	A1CF	52	59.486	ENSHGLG00100018987	-	61	59.486
ENSHGLG00100000518	A1CF	65	59.416	ENSHGLG00100004977	-	86	59.740
ENSHGLG00100000518	A1CF	52	49.515	ENSHGLG00100009598	-	59	49.363
ENSHGLG00100000518	A1CF	53	50.633	ENSHGLG00100008473	-	50	50.633
ENSHGLG00100000518	A1CF	75	53.915	ENSHGLG00100003071	-	75	53.915
ENSHGLG00100000518	A1CF	93	67.524	ENSHGLG00100012752	-	99	67.197
ENSHGLG00100000518	A1CF	51	51.133	ENSHGLG00100013302	SYNCRIP	57	50.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100000518	A1CF	100	95.462	ENSG00000148584	A1CF	100	98.507	Homo_sapiens
ENSHGLG00100000518	A1CF	100	72.139	ENSAPOG00000008259	a1cf	100	71.973	Acanthochromis_polyacanthus
ENSHGLG00100000518	A1CF	100	93.445	ENSAMEG00000000523	A1CF	100	93.950	Ailuropoda_melanoleuca
ENSHGLG00100000518	A1CF	100	74.225	ENSACIG00000008632	a1cf	100	75.367	Amphilophus_citrinellus
ENSHGLG00100000518	A1CF	100	72.831	ENSAOCG00000023744	a1cf	96	82.319	Amphiprion_ocellaris
ENSHGLG00100000518	A1CF	100	73.813	ENSAPEG00000009537	a1cf	100	74.304	Amphiprion_percula
ENSHGLG00100000518	A1CF	100	74.430	ENSATEG00000013720	a1cf	100	75.896	Anabas_testudineus
ENSHGLG00100000518	A1CF	100	87.919	ENSAPLG00000002964	A1CF	100	87.919	Anas_platyrhynchos
ENSHGLG00100000518	A1CF	100	82.047	ENSACAG00000015269	A1CF	100	82.047	Anolis_carolinensis
ENSHGLG00100000518	A1CF	100	93.950	ENSANAG00000019974	A1CF	100	93.950	Aotus_nancymaae
ENSHGLG00100000518	A1CF	100	71.732	ENSACLG00000017428	a1cf	100	73.039	Astatotilapia_calliptera
ENSHGLG00100000518	A1CF	100	73.058	ENSAMXG00000018180	a1cf	100	73.058	Astyanax_mexicanus
ENSHGLG00100000518	A1CF	100	93.613	ENSBTAG00000021195	A1CF	100	93.956	Bos_taurus
ENSHGLG00100000518	A1CF	100	95.462	ENSCJAG00000005045	A1CF	100	95.462	Callithrix_jacchus
ENSHGLG00100000518	A1CF	100	92.941	ENSCAFG00000015581	A1CF	100	93.445	Canis_familiaris
ENSHGLG00100000518	A1CF	100	92.941	ENSCAFG00020026421	A1CF	100	93.445	Canis_lupus_dingo
ENSHGLG00100000518	A1CF	100	94.118	ENSCHIG00000020411	A1CF	100	94.118	Capra_hircus
ENSHGLG00100000518	A1CF	95	93.794	ENSTSYG00000001755	A1CF	100	93.060	Carlito_syrichta
ENSHGLG00100000518	A1CF	100	81.288	ENSCAPG00000017386	A1CF	100	81.288	Cavia_aperea
ENSHGLG00100000518	A1CF	100	96.471	ENSCPOG00000009807	A1CF	100	96.471	Cavia_porcellus
ENSHGLG00100000518	A1CF	100	95.462	ENSCCAG00000018168	A1CF	100	95.462	Cebus_capucinus
ENSHGLG00100000518	A1CF	100	93.782	ENSCATG00000043715	A1CF	100	94.118	Cercocebus_atys
ENSHGLG00100000518	A1CF	100	96.477	ENSCLAG00000010424	A1CF	100	96.477	Chinchilla_lanigera
ENSHGLG00100000518	A1CF	100	95.294	ENSCSAG00000007032	A1CF	100	95.630	Chlorocebus_sabaeus
ENSHGLG00100000518	A1CF	98	88.305	ENSCHOG00000009089	A1CF	98	88.305	Choloepus_hoffmanni
ENSHGLG00100000518	A1CF	100	87.584	ENSCPBG00000026464	A1CF	100	87.248	Chrysemys_picta_bellii
ENSHGLG00100000518	A1CF	100	95.294	ENSCANG00000038032	A1CF	100	95.630	Colobus_angolensis_palliatus
ENSHGLG00100000518	A1CF	100	92.941	ENSCGRG00001017413	A1cf	100	92.941	Cricetulus_griseus_chok1gshd
ENSHGLG00100000518	A1CF	100	92.269	ENSCGRG00000017332	A1cf	100	92.269	Cricetulus_griseus_crigri
ENSHGLG00100000518	A1CF	100	73.798	ENSCSEG00000002361	a1cf	100	75.456	Cynoglossus_semilaevis
ENSHGLG00100000518	A1CF	100	72.801	ENSCVAG00000010520	a1cf	100	74.919	Cyprinodon_variegatus
ENSHGLG00100000518	A1CF	100	77.038	ENSDARG00000002968	a1cf	100	78.203	Danio_rerio
ENSHGLG00100000518	A1CF	100	94.118	ENSDNOG00000002829	A1CF	100	94.118	Dasypus_novemcinctus
ENSHGLG00100000518	A1CF	81	89.855	ENSETEG00000012527	A1CF	81	89.855	Echinops_telfairi
ENSHGLG00100000518	A1CF	100	94.640	ENSEASG00005012924	A1CF	100	94.305	Equus_asinus_asinus
ENSHGLG00100000518	A1CF	100	94.137	ENSECAG00000010424	A1CF	100	93.802	Equus_caballus
ENSHGLG00100000518	A1CF	78	80.514	ENSEEUG00000000013	A1CF	99	77.755	Erinaceus_europaeus
ENSHGLG00100000518	A1CF	100	77.537	ENSELUG00000003159	a1cf	100	78.203	Esox_lucius
ENSHGLG00100000518	A1CF	100	90.588	ENSFCAG00000011179	A1CF	100	91.261	Felis_catus
ENSHGLG00100000518	A1CF	100	85.235	ENSFALG00000013183	A1CF	100	85.235	Ficedula_albicollis
ENSHGLG00100000518	A1CF	100	95.798	ENSFDAG00000019371	A1CF	100	95.798	Fukomys_damarensis
ENSHGLG00100000518	A1CF	100	68.078	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSHGLG00100000518	A1CF	100	70.627	ENSGMOG00000018943	a1cf	100	70.462	Gadus_morhua
ENSHGLG00100000518	A1CF	95	87.080	ENSGALG00000003765	A1CF	97	87.080	Gallus_gallus
ENSHGLG00100000518	A1CF	100	69.408	ENSGAFG00000014868	a1cf	100	70.559	Gambusia_affinis
ENSHGLG00100000518	A1CF	100	73.355	ENSGACG00000010241	a1cf	100	73.684	Gasterosteus_aculeatus
ENSHGLG00100000518	A1CF	94	87.389	ENSGAGG00000016508	A1CF	97	87.034	Gopherus_agassizii
ENSHGLG00100000518	A1CF	100	95.462	ENSGGOG00000009670	A1CF	100	94.622	Gorilla_gorilla
ENSHGLG00100000518	A1CF	100	73.083	ENSHBUG00000021959	a1cf	100	74.715	Haplochromis_burtoni
ENSHGLG00100000518	A1CF	100	99.328	ENSHGLG00000008955	A1CF	100	99.328	Heterocephalus_glaber_female
ENSHGLG00100000518	A1CF	95	70.447	ENSHCOG00000017669	a1cf	100	71.220	Hippocampus_comes
ENSHGLG00100000518	A1CF	89	81.716	ENSIPUG00000010367	a1cf	95	82.453	Ictalurus_punctatus
ENSHGLG00100000518	A1CF	100	76.585	ENSKMAG00000006568	a1cf	100	76.098	Kryptolebias_marmoratus
ENSHGLG00100000518	A1CF	99	74.062	ENSLBEG00000020994	a1cf	98	75.534	Labrus_bergylta
ENSHGLG00100000518	A1CF	100	80.301	ENSLACG00000008061	A1CF	100	79.800	Latimeria_chalumnae
ENSHGLG00100000518	A1CF	100	80.333	ENSLOCG00000006302	a1cf	100	80.333	Lepisosteus_oculatus
ENSHGLG00100000518	A1CF	100	93.277	ENSLAFG00000015462	A1CF	100	93.277	Loxodonta_africana
ENSHGLG00100000518	A1CF	100	94.118	ENSMFAG00000035948	A1CF	100	94.454	Macaca_fascicularis
ENSHGLG00100000518	A1CF	100	94.118	ENSMMUG00000007077	A1CF	100	94.454	Macaca_mulatta
ENSHGLG00100000518	A1CF	100	93.782	ENSMNEG00000031454	A1CF	100	94.118	Macaca_nemestrina
ENSHGLG00100000518	A1CF	100	95.126	ENSMLEG00000037223	A1CF	100	95.462	Mandrillus_leucophaeus
ENSHGLG00100000518	A1CF	100	72.504	ENSMAMG00000010402	a1cf	100	73.529	Mastacembelus_armatus
ENSHGLG00100000518	A1CF	100	74.542	ENSMZEG00005013245	a1cf	100	75.167	Maylandia_zebra
ENSHGLG00100000518	A1CF	100	87.270	ENSMGAG00000001507	A1CF	100	87.270	Meleagris_gallopavo
ENSHGLG00100000518	A1CF	100	92.773	ENSMAUG00000007422	A1cf	100	92.773	Mesocricetus_auratus
ENSHGLG00100000518	A1CF	100	92.308	ENSMICG00000003377	A1CF	100	92.308	Microcebus_murinus
ENSHGLG00100000518	A1CF	100	92.605	ENSMOCG00000021536	A1cf	100	92.605	Microtus_ochrogaster
ENSHGLG00100000518	A1CF	100	66.776	ENSMMOG00000009422	a1cf	100	68.085	Mola_mola
ENSHGLG00100000518	A1CF	92	88.483	ENSMODG00000016478	A1CF	96	90.304	Monodelphis_domestica
ENSHGLG00100000518	A1CF	100	71.167	ENSMALG00000012992	a1cf	100	70.500	Monopterus_albus
ENSHGLG00100000518	A1CF	100	92.605	MGP_CAROLIEiJ_G0022873	A1cf	100	92.605	Mus_caroli
ENSHGLG00100000518	A1CF	100	92.605	ENSMUSG00000052595	A1cf	99	93.947	Mus_musculus
ENSHGLG00100000518	A1CF	100	91.765	MGP_PahariEiJ_G0014366	A1cf	100	91.765	Mus_pahari
ENSHGLG00100000518	A1CF	100	92.101	MGP_SPRETEiJ_G0023792	A1cf	100	92.101	Mus_spretus
ENSHGLG00100000518	A1CF	100	88.235	ENSMPUG00000016971	A1CF	100	88.403	Mustela_putorius_furo
ENSHGLG00100000518	A1CF	100	93.277	ENSMLUG00000016071	A1CF	100	93.277	Myotis_lucifugus
ENSHGLG00100000518	A1CF	100	94.118	ENSNGAG00000015136	A1cf	100	94.118	Nannospalax_galili
ENSHGLG00100000518	A1CF	100	73.409	ENSNBRG00000001712	a1cf	100	75.041	Neolamprologus_brichardi
ENSHGLG00100000518	A1CF	100	96.303	ENSNLEG00000012028	A1CF	100	96.303	Nomascus_leucogenys
ENSHGLG00100000518	A1CF	94	87.922	ENSMEUG00000015909	A1CF	100	88.455	Notamacropus_eugenii
ENSHGLG00100000518	A1CF	88	84.000	ENSOPRG00000010667	A1CF	96	84.000	Ochotona_princeps
ENSHGLG00100000518	A1CF	100	74.062	ENSONIG00000019105	a1cf	100	74.878	Oreochromis_niloticus
ENSHGLG00100000518	A1CF	78	87.794	ENSOANG00000007360	A1CF	99	87.794	Ornithorhynchus_anatinus
ENSHGLG00100000518	A1CF	100	91.779	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSHGLG00100000518	A1CF	100	73.529	ENSORLG00000013342	a1cf	100	73.139	Oryzias_latipes
ENSHGLG00100000518	A1CF	100	74.878	ENSORLG00020000586	a1cf	100	74.551	Oryzias_latipes_hni
ENSHGLG00100000518	A1CF	100	74.593	ENSORLG00015018569	a1cf	100	74.267	Oryzias_latipes_hsok
ENSHGLG00100000518	A1CF	100	73.813	ENSOMEG00000013531	a1cf	100	73.813	Oryzias_melastigma
ENSHGLG00100000518	A1CF	100	92.941	ENSOGAG00000012884	A1CF	100	93.613	Otolemur_garnettii
ENSHGLG00100000518	A1CF	100	94.118	ENSOARG00000013695	A1CF	100	94.118	Ovis_aries
ENSHGLG00100000518	A1CF	97	93.414	ENSPPAG00000028115	A1CF	100	96.761	Pan_paniscus
ENSHGLG00100000518	A1CF	100	92.269	ENSPPRG00000012180	A1CF	100	92.941	Panthera_pardus
ENSHGLG00100000518	A1CF	100	92.269	ENSPTIG00000021223	A1CF	100	92.941	Panthera_tigris_altaica
ENSHGLG00100000518	A1CF	100	95.630	ENSPTRG00000002508	A1CF	100	94.790	Pan_troglodytes
ENSHGLG00100000518	A1CF	100	94.118	ENSPANG00000021988	A1CF	100	94.454	Papio_anubis
ENSHGLG00100000518	A1CF	100	79.368	ENSPKIG00000025176	a1cf	100	79.035	Paramormyrops_kingsleyae
ENSHGLG00100000518	A1CF	100	85.738	ENSPSIG00000010318	A1CF	100	85.738	Pelodiscus_sinensis
ENSHGLG00100000518	A1CF	88	70.286	ENSPMGG00000013359	a1cf	99	66.894	Periophthalmus_magnuspinnatus
ENSHGLG00100000518	A1CF	100	93.445	ENSPEMG00000015021	A1cf	100	93.445	Peromyscus_maniculatus_bairdii
ENSHGLG00100000518	A1CF	100	87.919	ENSPCIG00000002175	A1CF	100	88.423	Phascolarctos_cinereus
ENSHGLG00100000518	A1CF	100	74.919	ENSPFOG00000006683	a1cf	100	76.873	Poecilia_formosa
ENSHGLG00100000518	A1CF	100	74.756	ENSPFOG00000007437	-	100	76.710	Poecilia_formosa
ENSHGLG00100000518	A1CF	100	73.616	ENSPLAG00000001210	-	100	75.570	Poecilia_latipinna
ENSHGLG00100000518	A1CF	100	73.616	ENSPLAG00000000026	a1cf	100	75.570	Poecilia_latipinna
ENSHGLG00100000518	A1CF	100	68.137	ENSPMEG00000015529	-	100	70.098	Poecilia_mexicana
ENSHGLG00100000518	A1CF	100	66.993	ENSPMEG00000000921	a1cf	100	68.954	Poecilia_mexicana
ENSHGLG00100000518	A1CF	100	74.593	ENSPREG00000016298	a1cf	100	76.710	Poecilia_reticulata
ENSHGLG00100000518	A1CF	100	94.790	ENSPPYG00000002819	A1CF	100	94.790	Pongo_abelii
ENSHGLG00100000518	A1CF	79	72.516	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSHGLG00100000518	A1CF	100	93.960	ENSPCOG00000024172	A1CF	100	93.960	Propithecus_coquereli
ENSHGLG00100000518	A1CF	100	74.388	ENSPNYG00000017944	a1cf	100	76.020	Pundamilia_nyererei
ENSHGLG00100000518	A1CF	100	78.311	ENSPNAG00000007704	a1cf	100	77.980	Pygocentrus_nattereri
ENSHGLG00100000518	A1CF	100	91.429	ENSRNOG00000033195	A1cf	100	91.429	Rattus_norvegicus
ENSHGLG00100000518	A1CF	100	88.777	ENSRBIG00000042892	A1CF	100	92.368	Rhinopithecus_bieti
ENSHGLG00100000518	A1CF	100	95.798	ENSRROG00000041398	A1CF	100	95.798	Rhinopithecus_roxellana
ENSHGLG00100000518	A1CF	100	95.630	ENSSBOG00000021930	A1CF	100	95.630	Saimiri_boliviensis_boliviensis
ENSHGLG00100000518	A1CF	100	88.255	ENSSHAG00000005096	A1CF	100	88.423	Sarcophilus_harrisii
ENSHGLG00100000518	A1CF	100	77.944	ENSSFOG00015011774	a1cf	100	78.109	Scleropages_formosus
ENSHGLG00100000518	A1CF	100	74.267	ENSSMAG00000013271	a1cf	100	74.593	Scophthalmus_maximus
ENSHGLG00100000518	A1CF	100	74.793	ENSSDUG00000013930	a1cf	100	75.788	Seriola_dumerili
ENSHGLG00100000518	A1CF	100	68.812	ENSSLDG00000004290	a1cf	100	68.482	Seriola_lalandi_dorsalis
ENSHGLG00100000518	A1CF	95	82.686	ENSSARG00000005940	A1CF	96	82.686	Sorex_araneus
ENSHGLG00100000518	A1CF	95	86.995	ENSSPUG00000006797	A1CF	95	86.116	Sphenodon_punctatus
ENSHGLG00100000518	A1CF	100	94.286	ENSSSCG00000010431	A1CF	100	94.286	Sus_scrofa
ENSHGLG00100000518	A1CF	100	87.124	ENSTGUG00000005090	A1CF	100	86.789	Taeniopygia_guttata
ENSHGLG00100000518	A1CF	100	73.573	ENSTRUG00000001982	a1cf	100	73.083	Takifugu_rubripes
ENSHGLG00100000518	A1CF	100	73.984	ENSTNIG00000003580	a1cf	100	73.659	Tetraodon_nigroviridis
ENSHGLG00100000518	A1CF	97	86.482	ENSTTRG00000013190	A1CF	95	86.482	Tursiops_truncatus
ENSHGLG00100000518	A1CF	100	92.269	ENSUAMG00000020065	A1CF	100	92.605	Ursus_americanus
ENSHGLG00100000518	A1CF	100	93.109	ENSUMAG00000011162	A1CF	100	93.445	Ursus_maritimus
ENSHGLG00100000518	A1CF	87	87.716	ENSVPAG00000006130	A1CF	86	87.716	Vicugna_pacos
ENSHGLG00100000518	A1CF	100	91.597	ENSVVUG00000002504	A1CF	100	91.933	Vulpes_vulpes
ENSHGLG00100000518	A1CF	100	77.333	ENSXETG00000006611	a1cf	100	77.333	Xenopus_tropicalis
ENSHGLG00100000518	A1CF	100	75.738	ENSXCOG00000003302	a1cf	100	76.557	Xiphophorus_couchianus
ENSHGLG00100000518	A1CF	100	76.885	ENSXMAG00000016703	a1cf	100	77.705	Xiphophorus_maculatus