EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100000622 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 1842 bases
Position: chrJH170085.1:4287-6128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100000759	La	PF05383.17	7.8e-17	1	1
ENSHGLP00100000758	La	PF05383.17	1.2e-16	1	1
ENSHGLP00100000760	La	PF05383.17	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100000792	-	987	-	ENSHGLP00100000760	328 (aa)	-	-
ENSHGLT00100000790	-	783	-	ENSHGLP00100000758	260 (aa)	-	-
ENSHGLT00100000791	-	642	-	ENSHGLP00100000759	213 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100000622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100000622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100000622	-	98	69.501	ENSHGLG00100002832	-	69	69.501

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100000622	-	100	82.857	ENSG00000161813	LARP4	100	84.000	Homo_sapiens
ENSHGLG00100000622	-	74	60.976	ENSACIG00000000370	-	84	60.241	Amphilophus_citrinellus
ENSHGLG00100000622	-	97	56.268	ENSACIG00000001198	larp4aa	77	75.362	Amphilophus_citrinellus
ENSHGLG00100000622	-	97	55.556	ENSAPEG00000015441	larp4ab	89	55.556	Amphiprion_percula
ENSHGLG00100000622	-	100	81.905	ENSANAG00000029342	LARP4	53	80.175	Aotus_nancymaae
ENSHGLG00100000622	-	98	51.989	ENSACLG00000000777	larp4ab	90	51.989	Astatotilapia_calliptera
ENSHGLG00100000622	-	100	82.857	ENSCJAG00000021131	LARP4	53	80.758	Callithrix_jacchus
ENSHGLG00100000622	-	100	84.286	ENSTSYG00000004342	LARP4	53	81.924	Carlito_syrichta
ENSHGLG00100000622	-	76	71.429	ENSCCAG00000030343	-	99	67.742	Cebus_capucinus
ENSHGLG00100000622	-	100	81.905	ENSCCAG00000024439	LARP4	53	80.175	Cebus_capucinus
ENSHGLG00100000622	-	85	70.000	ENSCATG00000039611	-	99	70.430	Cercocebus_atys
ENSHGLG00100000622	-	100	83.333	ENSCANG00000029159	-	53	81.633	Colobus_angolensis_palliatus
ENSHGLG00100000622	-	99	74.344	ENSCANG00000033097	-	74	73.936	Colobus_angolensis_palliatus
ENSHGLG00100000622	-	95	68.473	ENSCGRG00001011032	-	89	70.854	Cricetulus_griseus_chok1gshd
ENSHGLG00100000622	-	85	76.667	ENSCGRG00001011674	-	90	77.487	Cricetulus_griseus_chok1gshd
ENSHGLG00100000622	-	95	68.966	ENSCGRG00001000311	-	100	74.346	Cricetulus_griseus_chok1gshd
ENSHGLG00100000622	-	89	74.074	ENSCGRG00000000087	-	97	76.111	Cricetulus_griseus_crigri
ENSHGLG00100000622	-	71	62.745	ENSCVAG00000001411	-	87	61.290	Cyprinodon_variegatus
ENSHGLG00100000622	-	99	57.637	ENSDARG00000074979	larp4ab	85	70.861	Danio_rerio
ENSHGLG00100000622	-	95	46.439	ENSEBUG00000004426	LARP4	59	46.439	Eptatretus_burgeri
ENSHGLG00100000622	-	98	84.314	ENSEASG00005004356	LARP4	71	74.729	Equus_asinus_asinus
ENSHGLG00100000622	-	100	84.286	ENSFCAG00000031897	LARP4	52	82.799	Felis_catus
ENSHGLG00100000622	-	98	70.175	ENSFALG00000002114	LARP4	52	70.175	Ficedula_albicollis
ENSHGLG00100000622	-	86	84.153	ENSFDAG00000003796	-	100	84.153	Fukomys_damarensis
ENSHGLG00100000622	-	95	47.262	ENSGMOG00000009536	-	50	47.262	Gadus_morhua
ENSHGLG00100000622	-	64	74.453	ENSGAFG00000004280	larp4aa	63	69.565	Gambusia_affinis
ENSHGLG00100000622	-	98	58.213	ENSGACG00000008381	larp4aa	91	58.213	Gasterosteus_aculeatus
ENSHGLG00100000622	-	98	53.977	ENSGACG00000000680	larp4ab	50	53.693	Gasterosteus_aculeatus
ENSHGLG00100000622	-	98	79.765	ENSGGOG00000015230	LARP4	73	80.586	Gorilla_gorilla
ENSHGLG00100000622	-	82	59.459	ENSHBUG00000021929	-	89	59.459	Haplochromis_burtoni
ENSHGLG00100000622	-	98	69.501	ENSHGLG00000010979	-	69	69.501	Heterocephalus_glaber_female
ENSHGLG00100000622	-	100	91.429	ENSHGLG00000005513	-	53	87.464	Heterocephalus_glaber_female
ENSHGLG00100000622	-	99	56.305	ENSIPUG00000021659	larp4ab	50	56.305	Ictalurus_punctatus
ENSHGLG00100000622	-	88	72.487	ENSJJAG00000014649	-	95	78.571	Jaculus_jaculus
ENSHGLG00100000622	-	85	71.667	ENSMFAG00000001037	-	99	72.043	Macaca_fascicularis
ENSHGLG00100000622	-	100	83.810	ENSMFAG00000043681	LARP4	53	81.924	Macaca_fascicularis
ENSHGLG00100000622	-	100	83.810	ENSMMUG00000008172	LARP4	53	81.924	Macaca_mulatta
ENSHGLG00100000622	-	85	71.667	ENSMMUG00000045683	-	99	72.043	Macaca_mulatta
ENSHGLG00100000622	-	100	64.286	ENSMNEG00000037799	-	99	68.280	Macaca_nemestrina
ENSHGLG00100000622	-	100	83.333	ENSMLEG00000039661	LARP4	53	81.633	Mandrillus_leucophaeus
ENSHGLG00100000622	-	85	67.222	ENSMLEG00000038232	-	99	67.742	Mandrillus_leucophaeus
ENSHGLG00100000622	-	98	51.989	ENSMZEG00005007771	larp4ab	90	51.989	Maylandia_zebra
ENSHGLG00100000622	-	99	73.761	ENSMICG00000030156	-	90	75.258	Microcebus_murinus
ENSHGLG00100000622	-	84	84.358	ENSMICG00000046883	-	99	84.358	Microcebus_murinus
ENSHGLG00100000622	-	98	53.521	ENSMMOG00000021861	larp4ab	87	47.989	Mola_mola
ENSHGLG00100000622	-	81	71.564	ENSMODG00000004844	-	100	71.495	Monodelphis_domestica
ENSHGLG00100000622	-	87	61.622	ENSMALG00000018631	larp4aa	94	61.622	Monopterus_albus
ENSHGLG00100000622	-	76	62.791	ENSMALG00000015637	-	74	62.791	Monopterus_albus
ENSHGLG00100000622	-	99	80.769	MGP_CAROLIEiJ_G0020281	Larp4	84	80.428	Mus_caroli
ENSHGLG00100000622	-	100	82.857	ENSMUSG00000023025	Larp4	56	80.758	Mus_musculus
ENSHGLG00100000622	-	98	51.884	ENSNBRG00000015675	larp4ab	85	61.392	Neolamprologus_brichardi
ENSHGLG00100000622	-	100	82.857	ENSNLEG00000017798	LARP4	53	81.050	Nomascus_leucogenys
ENSHGLG00100000622	-	97	70.294	ENSOANG00000004373	LARP4	61	70.294	Ornithorhynchus_anatinus
ENSHGLG00100000622	-	73	63.226	ENSORLG00000018835	-	74	63.226	Oryzias_latipes
ENSHGLG00100000622	-	73	63.226	ENSORLG00020009602	-	74	63.226	Oryzias_latipes_hni
ENSHGLG00100000622	-	69	65.986	ENSORLG00015005865	-	71	65.986	Oryzias_latipes_hsok
ENSHGLG00100000622	-	68	68.750	ENSOMEG00000008561	-	75	68.750	Oryzias_melastigma
ENSHGLG00100000622	-	98	59.357	ENSOMEG00000019749	larp4aa	90	59.942	Oryzias_melastigma
ENSHGLG00100000622	-	97	75.731	ENSOGAG00000001415	LARP4	66	75.731	Otolemur_garnettii
ENSHGLG00100000622	-	99	74.924	ENSPPAG00000039122	-	82	74.924	Pan_paniscus
ENSHGLG00100000622	-	100	81.905	ENSPPAG00000035100	LARP4	57	80.758	Pan_paniscus
ENSHGLG00100000622	-	100	84.286	ENSPPRG00000004522	LARP4	52	82.799	Panthera_pardus
ENSHGLG00100000622	-	100	84.286	ENSPTIG00000015617	LARP4	52	82.799	Panthera_tigris_altaica
ENSHGLG00100000622	-	99	75.227	ENSPTRG00000045907	-	91	75.227	Pan_troglodytes
ENSHGLG00100000622	-	100	82.381	ENSPTRG00000004935	LARP4	53	81.050	Pan_troglodytes
ENSHGLG00100000622	-	100	83.333	ENSPANG00000022964	LARP4	53	81.633	Papio_anubis
ENSHGLG00100000622	-	98	50.720	ENSPMGG00000002719	larp4ab	90	51.585	Periophthalmus_magnuspinnatus
ENSHGLG00100000622	-	67	74.648	ENSPMGG00000023289	-	93	74.648	Periophthalmus_magnuspinnatus
ENSHGLG00100000622	-	82	51.955	ENSPMAG00000001038	-	89	55.066	Petromyzon_marinus
ENSHGLG00100000622	-	97	54.783	ENSPREG00000016263	larp4ab	99	52.000	Poecilia_reticulata
ENSHGLG00100000622	-	99	80.466	ENSPPYG00000004512	-	66	80.466	Pongo_abelii
ENSHGLG00100000622	-	81	79.524	ENSPPYG00000006330	-	98	79.439	Pongo_abelii
ENSHGLG00100000622	-	100	82.857	ENSPCOG00000026291	LARP4	52	80.466	Propithecus_coquereli
ENSHGLG00100000622	-	82	59.677	ENSPNYG00000000915	-	74	59.677	Pundamilia_nyererei
ENSHGLG00100000622	-	83	73.148	ENSRNOG00000057943	AABR07058884.2	99	73.148	Rattus_norvegicus
ENSHGLG00100000622	-	99	81.633	ENSRBIG00000038857	-	77	81.633	Rhinopithecus_bieti
ENSHGLG00100000622	-	100	81.905	ENSRROG00000042764	-	77	81.633	Rhinopithecus_roxellana
ENSHGLG00100000622	-	99	67.638	ENSRROG00000025487	-	81	67.638	Rhinopithecus_roxellana
ENSHGLG00100000622	-	100	80.952	ENSSBOG00000026650	LARP4	53	79.592	Saimiri_boliviensis_boliviensis
ENSHGLG00100000622	-	82	70.115	ENSSBOG00000035851	-	95	70.115	Saimiri_boliviensis_boliviensis
ENSHGLG00100000622	-	68	82.639	ENSSHAG00000013246	-	69	77.966	Sarcophilus_harrisii
ENSHGLG00100000622	-	98	56.932	ENSSPAG00000007222	larp4aa	74	74.306	Stegastes_partitus
ENSHGLG00100000622	-	94	51.964	ENSTRUG00000015939	larp4aa	91	53.172	Takifugu_rubripes
ENSHGLG00100000622	-	99	82.507	ENSUAMG00000013764	LARP4	77	82.507	Ursus_americanus
ENSHGLG00100000622	-	98	54.467	ENSXCOG00000019635	larp4ab	98	51.190	Xiphophorus_couchianus