EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100001011 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 151508 bases
Position: chrJH169647.1:982-152489
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100001273	ResIII	PF04851.15	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100001311	-	2981	-	ENSHGLP00100001274	642 (aa)	-	-
ENSHGLT00100001310	-	4218	-	ENSHGLP00100001273	874 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100001011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100001011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100001011	-	54	38.574	ENSHGLG00100017230	-	64	38.574
ENSHGLG00100001011	-	57	43.426	ENSHGLG00100001102	SMARCA1	63	39.252
ENSHGLG00100001011	-	56	42.073	ENSHGLG00100007155	CHD1L	53	42.073
ENSHGLG00100001011	-	54	31.412	ENSHGLG00100016987	RAD54L	66	31.610
ENSHGLG00100001011	-	55	35.448	ENSHGLG00100006812	SMARCAD1	50	35.448
ENSHGLG00100001011	-	54	37.692	ENSHGLG00100001957	-	68	37.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100001011	-	100	98.055	ENSG00000177200	CHD9	100	93.600	Homo_sapiens
ENSHGLG00100001011	-	100	98.169	ENSCLAG00000007137	CHD9	100	98.169	Chinchilla_lanigera
ENSHGLG00100001011	-	100	96.224	ENSCGRG00000012850	Chd9	100	96.224	Cricetulus_griseus_crigri
ENSHGLG00100001011	-	100	100.000	ENSHGLG00000014938	CHD9	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100001011	-	100	97.597	ENSSTOG00000022273	CHD9	100	97.597	Ictidomys_tridecemlineatus
ENSHGLG00100001011	-	100	95.767	ENSMAUG00000011087	-	100	95.767	Mesocricetus_auratus
ENSHGLG00100001011	-	100	96.110	ENSMOCG00000018583	-	100	96.110	Microtus_ochrogaster
ENSHGLG00100001011	-	100	95.080	ENSMUSG00000056608	Chd9	100	95.080	Mus_musculus
ENSHGLG00100001011	-	100	95.995	ENSNGAG00000019957	-	100	95.995	Nannospalax_galili
ENSHGLG00100001011	-	99	93.642	ENSRNOG00000049302	Chd9	55	93.642	Rattus_norvegicus