EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100002005 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 1849 bases
Position: chrJH168053.1:69858-71706
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100002570	tRNA_anti-codon	PF01336.25	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100002624	-	1692	-	ENSHGLP00100002570	563 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100002005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100002005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100002005	-	100	82.000	ENSHGLG00100000799	-	100	82.000
ENSHGLG00100002005	-	99	84.039	ENSHGLG00100017755	-	100	84.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100002005	-	99	52.864	ENSAPOG00000011658	rpa1	99	53.287	Acanthochromis_polyacanthus
ENSHGLG00100002005	-	90	56.627	ENSAPOG00000019409	RPA1	83	56.627	Acanthochromis_polyacanthus
ENSHGLG00100002005	-	99	75.698	ENSAMEG00000007706	RPA1	98	75.698	Ailuropoda_melanoleuca
ENSHGLG00100002005	-	95	50.515	ENSACIG00000007277	rpa1	99	50.515	Amphilophus_citrinellus
ENSHGLG00100002005	-	94	49.576	ENSACIG00000012881	RPA1	99	49.233	Amphilophus_citrinellus
ENSHGLG00100002005	-	99	53.834	ENSAOCG00000023376	rpa1	99	53.670	Amphiprion_ocellaris
ENSHGLG00100002005	-	96	47.947	ENSAOCG00000009003	RPA1	93	48.026	Amphiprion_ocellaris
ENSHGLG00100002005	-	99	54.072	ENSAPEG00000008634	rpa1	99	53.909	Amphiprion_percula
ENSHGLG00100002005	-	96	47.512	ENSAPEG00000019132	RPA1	84	58.897	Amphiprion_percula
ENSHGLG00100002005	-	99	46.260	ENSATEG00000006443	RPA1	99	45.859	Anabas_testudineus
ENSHGLG00100002005	-	93	55.017	ENSATEG00000022024	rpa1	99	55.095	Anabas_testudineus
ENSHGLG00100002005	-	97	62.376	ENSAPLG00000012442	RPA1	90	62.129	Anas_platyrhynchos
ENSHGLG00100002005	-	99	52.666	ENSACAG00000014490	RPA1	99	53.548	Anolis_carolinensis
ENSHGLG00100002005	-	98	75.788	ENSANAG00000023456	RPA1	100	75.788	Aotus_nancymaae
ENSHGLG00100002005	-	93	54.355	ENSACLG00000006640	rpa1	99	54.181	Astatotilapia_calliptera
ENSHGLG00100002005	-	99	49.137	ENSACLG00000005223	RPA1	99	48.980	Astatotilapia_calliptera
ENSHGLG00100002005	-	99	52.053	ENSAMXG00000008418	rpa1	99	53.028	Astyanax_mexicanus
ENSHGLG00100002005	-	100	75.000	ENSBTAG00000009711	RPA1	100	75.000	Bos_taurus
ENSHGLG00100002005	-	100	75.487	ENSCJAG00000001848	RPA1	100	75.487	Callithrix_jacchus
ENSHGLG00100002005	-	100	75.649	ENSCAFG00000019249	RPA1	100	75.974	Canis_familiaris
ENSHGLG00100002005	-	100	75.649	ENSCAFG00020009847	RPA1	100	75.974	Canis_lupus_dingo
ENSHGLG00100002005	-	100	75.325	ENSCHIG00000026308	RPA1	100	75.325	Capra_hircus
ENSHGLG00100002005	-	100	75.851	ENSTSYG00000003482	-	100	75.851	Carlito_syrichta
ENSHGLG00100002005	-	100	79.545	ENSCPOG00000000035	RPA1	100	79.545	Cavia_porcellus
ENSHGLG00100002005	-	100	66.721	ENSCCAG00000010981	RPA1	100	66.721	Cebus_capucinus
ENSHGLG00100002005	-	100	77.124	ENSCLAG00000015045	-	100	77.124	Chinchilla_lanigera
ENSHGLG00100002005	-	99	80.782	ENSCLAG00000005185	-	99	80.782	Chinchilla_lanigera
ENSHGLG00100002005	-	100	65.590	ENSCSAG00000013833	RPA1	100	65.590	Chlorocebus_sabaeus
ENSHGLG00100002005	-	95	74.617	ENSCHOG00000013540	-	99	74.617	Choloepus_hoffmanni
ENSHGLG00100002005	-	71	80.137	ENSCHOG00000009454	-	99	80.137	Choloepus_hoffmanni
ENSHGLG00100002005	-	99	66.016	ENSCPBG00000020377	RPA1	99	66.316	Chrysemys_picta_bellii
ENSHGLG00100002005	-	95	39.267	ENSCING00000023482	-	92	38.860	Ciona_intestinalis
ENSHGLG00100002005	-	98	73.058	ENSCANG00000030911	RPA1	100	73.058	Colobus_angolensis_palliatus
ENSHGLG00100002005	-	99	76.052	ENSCGRG00001008197	Rpa1	99	76.375	Cricetulus_griseus_chok1gshd
ENSHGLG00100002005	-	79	79.877	ENSCGRG00000000582	Rpa1	96	79.513	Cricetulus_griseus_crigri
ENSHGLG00100002005	-	99	44.391	ENSCSEG00000012726	RPA1	98	44.710	Cynoglossus_semilaevis
ENSHGLG00100002005	-	99	50.980	ENSCSEG00000013066	rpa1	99	50.654	Cynoglossus_semilaevis
ENSHGLG00100002005	-	96	48.490	ENSCVAG00000013446	-	93	48.013	Cyprinodon_variegatus
ENSHGLG00100002005	-	99	53.366	ENSCVAG00000019431	rpa1	99	54.930	Cyprinodon_variegatus
ENSHGLG00100002005	-	99	53.443	ENSDARG00000003938	rpa1	99	53.181	Danio_rerio
ENSHGLG00100002005	-	98	75.413	ENSDNOG00000017218	RPA1	98	75.413	Dasypus_novemcinctus
ENSHGLG00100002005	-	100	76.786	ENSDORG00000006199	Rpa1	100	76.786	Dipodomys_ordii
ENSHGLG00100002005	-	96	38.342	FBgn0010173	RpA-70	92	38.103	Drosophila_melanogaster
ENSHGLG00100002005	-	83	73.913	ENSETEG00000017608	RPA1	83	73.913	Echinops_telfairi
ENSHGLG00100002005	-	98	76.451	ENSEASG00005009372	RPA1	100	74.798	Equus_asinus_asinus
ENSHGLG00100002005	-	99	76.961	ENSECAG00000023886	RPA1	99	76.961	Equus_caballus
ENSHGLG00100002005	-	68	79.126	ENSEEUG00000002186	-	67	79.126	Erinaceus_europaeus
ENSHGLG00100002005	-	99	51.133	ENSELUG00000021071	rpa1	99	51.050	Esox_lucius
ENSHGLG00100002005	-	67	56.341	ENSELUG00000006136	RPA1	96	48.462	Esox_lucius
ENSHGLG00100002005	-	100	75.365	ENSFCAG00000006306	RPA1	99	75.365	Felis_catus
ENSHGLG00100002005	-	100	63.005	ENSFALG00000006575	RPA1	99	62.843	Ficedula_albicollis
ENSHGLG00100002005	-	99	82.410	ENSFDAG00000007720	RPA1	99	82.410	Fukomys_damarensis
ENSHGLG00100002005	-	99	52.796	ENSFHEG00000003580	rpa1	99	52.467	Fundulus_heteroclitus
ENSHGLG00100002005	-	99	50.245	ENSGMOG00000010382	rpa1	99	50.245	Gadus_morhua
ENSHGLG00100002005	-	100	62.723	ENSGALG00000003072	RPA1	99	62.764	Gallus_gallus
ENSHGLG00100002005	-	98	52.614	ENSGAFG00000012916	rpa1	99	52.280	Gambusia_affinis
ENSHGLG00100002005	-	99	45.865	ENSGAFG00000020953	RPA1	99	46.423	Gambusia_affinis
ENSHGLG00100002005	-	99	52.614	ENSGACG00000010856	rpa1	99	52.614	Gasterosteus_aculeatus
ENSHGLG00100002005	-	99	66.016	ENSGAGG00000013611	RPA1	99	65.366	Gopherus_agassizii
ENSHGLG00100002005	-	100	73.864	ENSGGOG00000014186	RPA1	100	73.864	Gorilla_gorilla
ENSHGLG00100002005	-	96	43.907	ENSHBUG00000009348	RPA1	99	43.907	Haplochromis_burtoni
ENSHGLG00100002005	-	99	53.758	ENSHBUG00000017773	rpa1	99	53.758	Haplochromis_burtoni
ENSHGLG00100002005	-	99	84.039	ENSHGLG00000008846	RPA1	100	84.039	Heterocephalus_glaber_female
ENSHGLG00100002005	-	93	38.840	ENSHCOG00000000351	RPA1	92	39.085	Hippocampus_comes
ENSHGLG00100002005	-	99	52.520	ENSHCOG00000001401	rpa1	99	52.932	Hippocampus_comes
ENSHGLG00100002005	-	99	53.094	ENSIPUG00000004400	rpa1	99	53.094	Ictalurus_punctatus
ENSHGLG00100002005	-	98	72.066	ENSSTOG00000022475	RPA1	98	72.066	Ictidomys_tridecemlineatus
ENSHGLG00100002005	-	95	78.876	ENSJJAG00000000876	Rpa1	98	78.876	Jaculus_jaculus
ENSHGLG00100002005	-	99	52.855	ENSKMAG00000005605	rpa1	99	52.855	Kryptolebias_marmoratus
ENSHGLG00100002005	-	99	46.613	ENSKMAG00000000234	RPA1	99	45.907	Kryptolebias_marmoratus
ENSHGLG00100002005	-	96	53.776	ENSLBEG00000002281	RPA1	84	53.776	Labrus_bergylta
ENSHGLG00100002005	-	99	52.846	ENSLBEG00000021604	rpa1	99	52.846	Labrus_bergylta
ENSHGLG00100002005	-	78	59.544	ENSLACG00000007210	RPA1	96	59.833	Latimeria_chalumnae
ENSHGLG00100002005	-	99	56.129	ENSLOCG00000006397	rpa1	99	55.949	Lepisosteus_oculatus
ENSHGLG00100002005	-	99	74.157	ENSLAFG00000015354	RPA1	99	74.157	Loxodonta_africana
ENSHGLG00100002005	-	84	79.010	ENSMFAG00000036138	-	99	79.010	Macaca_fascicularis
ENSHGLG00100002005	-	100	74.215	ENSMMUG00000002442	-	100	73.675	Macaca_mulatta
ENSHGLG00100002005	-	98	76.529	ENSMMUG00000011604	-	100	76.529	Macaca_mulatta
ENSHGLG00100002005	-	100	73.052	ENSMNEG00000031632	-	100	73.052	Macaca_nemestrina
ENSHGLG00100002005	-	100	67.162	ENSMNEG00000029837	-	100	66.172	Macaca_nemestrina
ENSHGLG00100002005	-	98	71.287	ENSMLEG00000038768	-	100	71.287	Mandrillus_leucophaeus
ENSHGLG00100002005	-	99	54.323	ENSMAMG00000017993	rpa1	99	54.235	Mastacembelus_armatus
ENSHGLG00100002005	-	99	45.441	ENSMAMG00000020097	RPA1	83	54.005	Mastacembelus_armatus
ENSHGLG00100002005	-	99	53.922	ENSMZEG00005007551	rpa1	99	53.922	Maylandia_zebra
ENSHGLG00100002005	-	99	49.137	ENSMZEG00005024731	RPA1	99	48.980	Maylandia_zebra
ENSHGLG00100002005	-	99	62.787	ENSMGAG00000005315	RPA1	98	62.829	Meleagris_gallopavo
ENSHGLG00100002005	-	97	76.667	ENSMAUG00000010474	Rpa1	99	76.667	Mesocricetus_auratus
ENSHGLG00100002005	-	100	76.623	ENSMICG00000012867	RPA1	100	76.623	Microcebus_murinus
ENSHGLG00100002005	-	99	75.041	ENSMOCG00000013019	Rpa1	99	75.041	Microtus_ochrogaster
ENSHGLG00100002005	-	96	53.378	ENSMMOG00000014292	rpa1	99	53.130	Mola_mola
ENSHGLG00100002005	-	97	47.659	ENSMMOG00000010868	RPA1	97	47.157	Mola_mola
ENSHGLG00100002005	-	99	71.010	ENSMODG00000010549	RPA1	99	71.010	Monodelphis_domestica
ENSHGLG00100002005	-	99	54.337	ENSMALG00000011453	rpa1	99	54.173	Monopterus_albus
ENSHGLG00100002005	-	95	54.005	ENSMALG00000001208	RPA1	77	54.005	Monopterus_albus
ENSHGLG00100002005	-	99	75.162	MGP_CAROLIEiJ_G0016734	Rpa1	99	75.162	Mus_caroli
ENSHGLG00100002005	-	99	73.151	ENSMUSG00000000751	Rpa1	99	73.473	Mus_musculus
ENSHGLG00100002005	-	99	75.767	MGP_PahariEiJ_G0017871	Rpa1	99	76.090	Mus_pahari
ENSHGLG00100002005	-	99	73.194	MGP_SPRETEiJ_G0017577	Rpa1	99	73.515	Mus_spretus
ENSHGLG00100002005	-	100	75.162	ENSMPUG00000013119	RPA1	100	75.162	Mustela_putorius_furo
ENSHGLG00100002005	-	100	73.108	ENSMLUG00000006113	RPA1	100	73.108	Myotis_lucifugus
ENSHGLG00100002005	-	95	75.340	ENSNGAG00000004522	Rpa1	94	75.340	Nannospalax_galili
ENSHGLG00100002005	-	93	54.404	ENSNBRG00000020595	rpa1	99	54.231	Neolamprologus_brichardi
ENSHGLG00100002005	-	88	52.830	ENSNBRG00000009672	RPA1	86	51.509	Neolamprologus_brichardi
ENSHGLG00100002005	-	100	76.299	ENSNLEG00000017149	RPA1	100	76.299	Nomascus_leucogenys
ENSHGLG00100002005	-	98	62.252	ENSMEUG00000006714	RPA1	99	61.921	Notamacropus_eugenii
ENSHGLG00100002005	-	95	78.020	ENSODEG00000009038	RPA1	96	78.020	Octodon_degus
ENSHGLG00100002005	-	99	54.323	ENSONIG00000013135	rpa1	99	54.323	Oreochromis_niloticus
ENSHGLG00100002005	-	97	71.429	ENSOANG00000010880	RPA1	99	71.476	Ornithorhynchus_anatinus
ENSHGLG00100002005	-	100	72.291	ENSOCUG00000001504	RPA1	100	72.291	Oryctolagus_cuniculus
ENSHGLG00100002005	-	99	45.706	ENSORLG00000003368	RPA1	99	46.166	Oryzias_latipes
ENSHGLG00100002005	-	99	52.683	ENSORLG00000004856	rpa1	99	52.606	Oryzias_latipes
ENSHGLG00100002005	-	99	52.846	ENSORLG00020008980	rpa1	99	52.769	Oryzias_latipes_hni
ENSHGLG00100002005	-	99	44.880	ENSORLG00020015284	RPA1	85	54.607	Oryzias_latipes_hni
ENSHGLG00100002005	-	72	55.269	ENSORLG00015005867	-	96	55.269	Oryzias_latipes_hsok
ENSHGLG00100002005	-	99	46.562	ENSORLG00015020383	RPA1	99	46.562	Oryzias_latipes_hsok
ENSHGLG00100002005	-	99	52.846	ENSORLG00015013982	rpa1	99	52.769	Oryzias_latipes_hsok
ENSHGLG00100002005	-	99	52.855	ENSOMEG00000004704	rpa1	99	52.692	Oryzias_melastigma
ENSHGLG00100002005	-	99	48.760	ENSOMEG00000011040	RPA1	99	48.527	Oryzias_melastigma
ENSHGLG00100002005	-	94	70.526	ENSOGAG00000029379	-	100	70.526	Otolemur_garnettii
ENSHGLG00100002005	-	100	75.487	ENSOGAG00000005581	-	100	75.487	Otolemur_garnettii
ENSHGLG00100002005	-	100	75.325	ENSOARG00000014479	RPA1	100	75.325	Ovis_aries
ENSHGLG00100002005	-	100	76.136	ENSPPAG00000039680	RPA1	100	76.136	Pan_paniscus
ENSHGLG00100002005	-	100	74.878	ENSPPRG00000011807	RPA1	99	74.878	Panthera_pardus
ENSHGLG00100002005	-	100	74.554	ENSPTIG00000007898	RPA1	99	74.554	Panthera_tigris_altaica
ENSHGLG00100002005	-	100	76.461	ENSPTRG00000008539	RPA1	100	76.461	Pan_troglodytes
ENSHGLG00100002005	-	100	76.136	ENSPANG00000024592	RPA1	100	76.136	Papio_anubis
ENSHGLG00100002005	-	96	54.435	ENSPKIG00000008053	rpa1	92	54.087	Paramormyrops_kingsleyae
ENSHGLG00100002005	-	97	64.725	ENSPSIG00000015617	RPA1	99	64.667	Pelodiscus_sinensis
ENSHGLG00100002005	-	99	45.455	ENSPMGG00000000543	RPA1	99	47.443	Periophthalmus_magnuspinnatus
ENSHGLG00100002005	-	98	52.736	ENSPMGG00000011589	rpa1	99	52.736	Periophthalmus_magnuspinnatus
ENSHGLG00100002005	-	99	75.856	ENSPEMG00000021061	Rpa1	99	75.856	Peromyscus_maniculatus_bairdii
ENSHGLG00100002005	-	100	70.340	ENSPCIG00000019049	RPA1	99	70.016	Phascolarctos_cinereus
ENSHGLG00100002005	-	99	52.769	ENSPFOG00000003987	rpa1	99	53.038	Poecilia_formosa
ENSHGLG00100002005	-	96	47.635	ENSPLAG00000008844	-	96	47.967	Poecilia_latipinna
ENSHGLG00100002005	-	99	53.366	ENSPLAG00000004984	rpa1	99	53.202	Poecilia_latipinna
ENSHGLG00100002005	-	99	52.932	ENSPMEG00000020602	rpa1	99	53.927	Poecilia_mexicana
ENSHGLG00100002005	-	96	48.124	ENSPMEG00000003627	-	96	48.124	Poecilia_mexicana
ENSHGLG00100002005	-	99	44.822	ENSPREG00000010119	RPA1	92	59.296	Poecilia_reticulata
ENSHGLG00100002005	-	96	50.000	ENSPREG00000010174	rpa1	95	50.000	Poecilia_reticulata
ENSHGLG00100002005	-	100	77.273	ENSPCOG00000001799	RPA1	100	77.273	Propithecus_coquereli
ENSHGLG00100002005	-	99	76.835	ENSPVAG00000002149	RPA1	99	76.835	Pteropus_vampyrus
ENSHGLG00100002005	-	99	48.980	ENSPNYG00000024165	RPA1	99	48.823	Pundamilia_nyererei
ENSHGLG00100002005	-	99	53.922	ENSPNYG00000016316	rpa1	99	54.167	Pundamilia_nyererei
ENSHGLG00100002005	-	97	46.423	ENSPNAG00000008599	rpa1	96	47.938	Pygocentrus_nattereri
ENSHGLG00100002005	-	97	78.055	ENSRNOG00000003123	Rpa1	99	75.530	Rattus_norvegicus
ENSHGLG00100002005	-	99	76.221	ENSRBIG00000036587	RPA1	99	75.693	Rhinopithecus_bieti
ENSHGLG00100002005	-	99	71.010	ENSRROG00000043278	RPA1	99	70.473	Rhinopithecus_roxellana
ENSHGLG00100002005	-	66	36.090	YAR007C	RFA1	66	35.539	Saccharomyces_cerevisiae
ENSHGLG00100002005	-	98	73.719	ENSSBOG00000030233	RPA1	99	73.841	Saimiri_boliviensis_boliviensis
ENSHGLG00100002005	-	99	71.148	ENSSHAG00000007969	RPA1	98	71.803	Sarcophilus_harrisii
ENSHGLG00100002005	-	99	53.971	ENSSFOG00015005362	rpa1	92	53.971	Scleropages_formosus
ENSHGLG00100002005	-	99	45.289	ENSSMAG00000019746	RPA1	84	55.606	Scophthalmus_maximus
ENSHGLG00100002005	-	99	54.486	ENSSDUG00000011949	rpa1	99	54.235	Seriola_dumerili
ENSHGLG00100002005	-	89	56.481	ENSSDUG00000016358	RPA1	82	56.293	Seriola_dumerili
ENSHGLG00100002005	-	89	56.279	ENSSLDG00000020784	RPA1	81	56.092	Seriola_lalandi_dorsalis
ENSHGLG00100002005	-	99	54.812	ENSSLDG00000011806	rpa1	99	54.560	Seriola_lalandi_dorsalis
ENSHGLG00100002005	-	84	68.317	ENSSARG00000007506	RPA1	83	67.921	Sorex_araneus
ENSHGLG00100002005	-	96	61.953	ENSSPUG00000007223	RPA1	99	61.849	Sphenodon_punctatus
ENSHGLG00100002005	-	99	53.834	ENSSPAG00000009903	rpa1	99	53.834	Stegastes_partitus
ENSHGLG00100002005	-	98	48.435	ENSSPAG00000011165	RPA1	98	48.259	Stegastes_partitus
ENSHGLG00100002005	-	98	74.959	ENSSSCG00000017822	RPA1	100	74.959	Sus_scrofa
ENSHGLG00100002005	-	100	63.047	ENSTGUG00000005775	RPA1	99	62.723	Taeniopygia_guttata
ENSHGLG00100002005	-	99	54.486	ENSTRUG00000003616	rpa1	99	54.486	Takifugu_rubripes
ENSHGLG00100002005	-	95	56.522	ENSTRUG00000000405	RPA1	84	56.281	Takifugu_rubripes
ENSHGLG00100002005	-	99	55.735	ENSTNIG00000016199	rpa1	99	55.484	Tetraodon_nigroviridis
ENSHGLG00100002005	-	79	81.395	ENSTBEG00000002709	RPA1	81	81.395	Tupaia_belangeri
ENSHGLG00100002005	-	99	74.919	ENSTTRG00000001169	RPA1	99	74.919	Tursiops_truncatus
ENSHGLG00100002005	-	90	95.745	ENSUAMG00000015676	RPA1	93	95.745	Ursus_americanus
ENSHGLG00100002005	-	100	76.136	ENSUMAG00000009328	RPA1	100	76.136	Ursus_maritimus
ENSHGLG00100002005	-	99	75.534	ENSVPAG00000009443	RPA1	99	75.534	Vicugna_pacos
ENSHGLG00100002005	-	100	75.649	ENSVVUG00000021715	RPA1	100	75.974	Vulpes_vulpes
ENSHGLG00100002005	-	99	62.890	ENSXETG00000013538	rpa1	99	63.054	Xenopus_tropicalis
ENSHGLG00100002005	-	93	49.291	ENSXCOG00000009899	-	98	49.291	Xiphophorus_couchianus
ENSHGLG00100002005	-	95	53.521	ENSXCOG00000010068	rpa1	93	53.616	Xiphophorus_couchianus
ENSHGLG00100002005	-	89	55.606	ENSXMAG00000010333	RPA1	88	55.606	Xiphophorus_maculatus
ENSHGLG00100002005	-	99	52.280	ENSXMAG00000004102	rpa1	99	54.021	Xiphophorus_maculatus