EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100002232 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 14606 bases
Position: chrJH168150.1:404124-418729
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100002899	Nop52	PF05997.12	4e-43	1	1
ENSHGLP00100002898	Nop52	PF05997.12	4.6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100002954	RRP1B-202	2041	-	ENSHGLP00100002899	670 (aa)	-	-
ENSHGLT00100002953	RRP1B-201	2178	-	ENSHGLP00100002898	725 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100002232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100002232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100002232	RRP1B	99	57.958	ENSG00000160208	RRP1B	91	68.406	Homo_sapiens
ENSHGLG00100002232	RRP1B	50	43.402	ENSAMEG00000011448	RRP1	72	43.402	Ailuropoda_melanoleuca
ENSHGLG00100002232	RRP1B	64	73.282	ENSAMEG00000011401	RRP1B	65	73.282	Ailuropoda_melanoleuca
ENSHGLG00100002232	RRP1B	51	50.000	ENSAOCG00000017894	-	84	49.315	Amphiprion_ocellaris
ENSHGLG00100002232	RRP1B	82	50.932	ENSAPLG00000004310	RRP1B	77	50.932	Anas_platyrhynchos
ENSHGLG00100002232	RRP1B	68	49.689	ENSACAG00000017851	RRP1B	63	49.689	Anolis_carolinensis
ENSHGLG00100002232	RRP1B	99	56.785	ENSANAG00000034889	RRP1B	92	68.258	Aotus_nancymaae
ENSHGLG00100002232	RRP1B	91	60.465	ENSBTAG00000017418	RRP1B	81	57.492	Bos_taurus
ENSHGLG00100002232	RRP1B	97	56.469	ENSCJAG00000017077	RRP1B	89	69.817	Callithrix_jacchus
ENSHGLG00100002232	RRP1B	99	55.210	ENSCAFG00000010621	RRP1B	82	66.761	Canis_familiaris
ENSHGLG00100002232	RRP1B	99	55.061	ENSCAFG00020018901	RRP1B	79	66.387	Canis_lupus_dingo
ENSHGLG00100002232	RRP1B	78	62.611	ENSCHIG00000021519	RRP1B	75	64.890	Capra_hircus
ENSHGLG00100002232	RRP1B	90	78.426	ENSCPOG00000002396	RRP1B	98	78.592	Cavia_porcellus
ENSHGLG00100002232	RRP1B	99	56.917	ENSCCAG00000029384	RRP1B	91	68.208	Cebus_capucinus
ENSHGLG00100002232	RRP1B	99	57.775	ENSCATG00000017423	RRP1B	91	68.406	Cercocebus_atys
ENSHGLG00100002232	RRP1B	99	68.889	ENSCLAG00000005622	RRP1B	91	75.798	Chinchilla_lanigera
ENSHGLG00100002232	RRP1B	99	57.632	ENSCSAG00000007961	RRP1B	90	70.968	Chlorocebus_sabaeus
ENSHGLG00100002232	RRP1B	81	55.663	ENSCPBG00000010310	RRP1B	74	54.187	Chrysemys_picta_bellii
ENSHGLG00100002232	RRP1B	99	57.763	ENSCANG00000040952	RRP1B	92	68.258	Colobus_angolensis_palliatus
ENSHGLG00100002232	RRP1B	54	39.402	ENSCGRG00001011920	Rrp1	70	42.006	Cricetulus_griseus_chok1gshd
ENSHGLG00100002232	RRP1B	99	55.061	ENSCGRG00001010889	-	86	65.588	Cricetulus_griseus_chok1gshd
ENSHGLG00100002232	RRP1B	99	54.804	ENSCGRG00001023882	-	84	65.839	Cricetulus_griseus_chok1gshd
ENSHGLG00100002232	RRP1B	54	39.402	ENSCGRG00000008915	Rrp1	70	42.006	Cricetulus_griseus_crigri
ENSHGLG00100002232	RRP1B	99	55.061	ENSCGRG00000001553	Rrp1b	87	66.358	Cricetulus_griseus_crigri
ENSHGLG00100002232	RRP1B	58	49.451	ENSCSEG00000020711	-	67	52.273	Cynoglossus_semilaevis
ENSHGLG00100002232	RRP1B	51	41.509	ENSDARG00000103337	rrp1	53	41.509	Danio_rerio
ENSHGLG00100002232	RRP1B	90	66.469	ENSDNOG00000032774	RRP1B	76	66.469	Dasypus_novemcinctus
ENSHGLG00100002232	RRP1B	53	45.856	ENSDNOG00000019880	RRP1	69	47.468	Dasypus_novemcinctus
ENSHGLG00100002232	RRP1B	74	62.752	ENSDORG00000005496	Rrp1b	80	60.997	Dipodomys_ordii
ENSHGLG00100002232	RRP1B	91	58.772	ENSETEG00000019489	RRP1B	68	78.824	Echinops_telfairi
ENSHGLG00100002232	RRP1B	99	56.101	ENSEASG00005001687	RRP1B	78	66.525	Equus_asinus_asinus
ENSHGLG00100002232	RRP1B	52	42.061	ENSEASG00005001673	RRP1	74	43.440	Equus_asinus_asinus
ENSHGLG00100002232	RRP1B	52	40.997	ENSECAG00000015703	RRP1	75	42.857	Equus_caballus
ENSHGLG00100002232	RRP1B	99	55.836	ENSECAG00000018018	RRP1B	78	66.525	Equus_caballus
ENSHGLG00100002232	RRP1B	56	50.833	ENSELUG00000015885	-	74	38.790	Esox_lucius
ENSHGLG00100002232	RRP1B	51	44.160	ENSFCAG00000008434	RRP1	68	46.319	Felis_catus
ENSHGLG00100002232	RRP1B	99	55.088	ENSFCAG00000010272	RRP1B	87	64.244	Felis_catus
ENSHGLG00100002232	RRP1B	76	53.903	ENSFALG00000002024	RRP1B	76	51.815	Ficedula_albicollis
ENSHGLG00100002232	RRP1B	99	73.140	ENSFDAG00000010899	RRP1B	93	82.102	Fukomys_damarensis
ENSHGLG00100002232	RRP1B	53	48.421	ENSFHEG00000016314	-	50	42.029	Fundulus_heteroclitus
ENSHGLG00100002232	RRP1B	55	50.943	ENSGMOG00000001953	-	57	50.943	Gadus_morhua
ENSHGLG00100002232	RRP1B	82	49.367	ENSGALG00000035696	RRP1B	72	50.157	Gallus_gallus
ENSHGLG00100002232	RRP1B	56	49.138	ENSGACG00000001438	rrp1	61	47.899	Gasterosteus_aculeatus
ENSHGLG00100002232	RRP1B	66	55.375	ENSGAGG00000000375	RRP1B	75	52.616	Gopherus_agassizii
ENSHGLG00100002232	RRP1B	99	58.311	ENSGGOG00000012069	RRP1B	91	68.406	Gorilla_gorilla
ENSHGLG00100002232	RRP1B	99	92.105	ENSHGLG00000004968	RRP1B	93	92.105	Heterocephalus_glaber_female
ENSHGLG00100002232	RRP1B	60	42.763	ENSHCOG00000018388	-	55	42.763	Hippocampus_comes
ENSHGLG00100002232	RRP1B	54	42.735	ENSIPUG00000000673	-	63	36.826	Ictalurus_punctatus
ENSHGLG00100002232	RRP1B	53	40.599	ENSSTOG00000011116	RRP1	76	41.642	Ictidomys_tridecemlineatus
ENSHGLG00100002232	RRP1B	99	60.162	ENSSTOG00000011790	RRP1B	88	70.141	Ictidomys_tridecemlineatus
ENSHGLG00100002232	RRP1B	98	50.068	ENSJJAG00000021279	Rrp1b	89	56.923	Jaculus_jaculus
ENSHGLG00100002232	RRP1B	53	45.902	ENSKMAG00000005539	rrp1	68	47.200	Kryptolebias_marmoratus
ENSHGLG00100002232	RRP1B	74	40.960	ENSLACG00000017332	-	70	43.333	Latimeria_chalumnae
ENSHGLG00100002232	RRP1B	58	52.459	ENSLOCG00000004064	-	69	44.633	Lepisosteus_oculatus
ENSHGLG00100002232	RRP1B	94	52.697	ENSLAFG00000000766	RRP1B	99	62.701	Loxodonta_africana
ENSHGLG00100002232	RRP1B	99	57.181	ENSMFAG00000039152	RRP1B	92	68.258	Macaca_fascicularis
ENSHGLG00100002232	RRP1B	99	55.277	ENSMMUG00000000104	RRP1B	79	68.539	Macaca_mulatta
ENSHGLG00100002232	RRP1B	99	57.049	ENSMNEG00000034269	RRP1B	92	68.539	Macaca_nemestrina
ENSHGLG00100002232	RRP1B	99	57.500	ENSMLEG00000040044	RRP1B	95	68.696	Mandrillus_leucophaeus
ENSHGLG00100002232	RRP1B	64	56.000	ENSMGAG00000014591	RRP1B	69	50.470	Meleagris_gallopavo
ENSHGLG00100002232	RRP1B	98	54.508	ENSMAUG00000021508	Rrp1b	85	62.422	Mesocricetus_auratus
ENSHGLG00100002232	RRP1B	53	40.860	ENSMICG00000004700	RRP1	77	41.429	Microcebus_murinus
ENSHGLG00100002232	RRP1B	99	59.572	ENSMICG00000004686	RRP1B	92	69.101	Microcebus_murinus
ENSHGLG00100002232	RRP1B	87	62.099	ENSMOCG00000001117	Rrp1b	81	62.170	Microtus_ochrogaster
ENSHGLG00100002232	RRP1B	97	51.984	ENSMODG00000021033	RRP1B	75	65.758	Monodelphis_domestica
ENSHGLG00100002232	RRP1B	78	64.308	MGP_CAROLIEiJ_G0021376	Rrp1b	79	64.596	Mus_caroli
ENSHGLG00100002232	RRP1B	50	46.703	MGP_CAROLIEiJ_G0015508	Rrp1	63	46.703	Mus_caroli
ENSHGLG00100002232	RRP1B	98	53.857	ENSMUSG00000058392	Rrp1b	81	62.170	Mus_musculus
ENSHGLG00100002232	RRP1B	50	46.703	ENSMUSG00000061032	Rrp1	83	33.333	Mus_musculus
ENSHGLG00100002232	RRP1B	50	47.253	MGP_PahariEiJ_G0030921	Rrp1	74	40.476	Mus_pahari
ENSHGLG00100002232	RRP1B	98	54.571	MGP_PahariEiJ_G0023695	Rrp1b	86	65.089	Mus_pahari
ENSHGLG00100002232	RRP1B	98	53.581	MGP_SPRETEiJ_G0022290	Rrp1b	81	63.905	Mus_spretus
ENSHGLG00100002232	RRP1B	97	52.042	ENSMPUG00000009810	RRP1B	79	67.781	Mustela_putorius_furo
ENSHGLG00100002232	RRP1B	81	67.151	ENSMLUG00000007738	RRP1B	76	67.151	Myotis_lucifugus
ENSHGLG00100002232	RRP1B	81	64.265	ENSNGAG00000021073	Rrp1b	82	64.706	Nannospalax_galili
ENSHGLG00100002232	RRP1B	99	56.059	ENSNLEG00000001490	RRP1B	91	67.826	Nomascus_leucogenys
ENSHGLG00100002232	RRP1B	55	82.000	ENSMEUG00000003226	-	69	82.000	Notamacropus_eugenii
ENSHGLG00100002232	RRP1B	98	64.656	ENSODEG00000013177	RRP1B	90	70.796	Octodon_degus
ENSHGLG00100002232	RRP1B	63	44.755	ENSONIG00000004264	rrp1	67	40.237	Oreochromis_niloticus
ENSHGLG00100002232	RRP1B	78	53.488	ENSOANG00000006470	RRP1B	76	53.488	Ornithorhynchus_anatinus
ENSHGLG00100002232	RRP1B	83	62.324	ENSOCUG00000025931	RRP1B	76	62.411	Oryctolagus_cuniculus
ENSHGLG00100002232	RRP1B	53	53.488	ENSOMEG00000016910	-	50	53.488	Oryzias_melastigma
ENSHGLG00100002232	RRP1B	64	68.852	ENSOGAG00000009872	RRP1B	68	67.937	Otolemur_garnettii
ENSHGLG00100002232	RRP1B	76	64.688	ENSOARG00000011314	RRP1B	80	65.000	Ovis_aries
ENSHGLG00100002232	RRP1B	99	57.825	ENSPPAG00000035319	RRP1B	95	68.406	Pan_paniscus
ENSHGLG00100002232	RRP1B	99	53.794	ENSPPRG00000010356	RRP1B	88	63.099	Panthera_pardus
ENSHGLG00100002232	RRP1B	51	44.058	ENSPPRG00000010656	RRP1	67	46.815	Panthera_pardus
ENSHGLG00100002232	RRP1B	51	41.408	ENSPTIG00000019473	RRP1	72	43.161	Panthera_tigris_altaica
ENSHGLG00100002232	RRP1B	66	73.228	ENSPTIG00000016894	RRP1B	95	61.972	Panthera_tigris_altaica
ENSHGLG00100002232	RRP1B	99	58.021	ENSPTRG00000013958	RRP1B	91	68.116	Pan_troglodytes
ENSHGLG00100002232	RRP1B	99	57.500	ENSPANG00000011090	RRP1B	92	68.539	Papio_anubis
ENSHGLG00100002232	RRP1B	61	51.538	ENSPKIG00000003422	-	57	51.538	Paramormyrops_kingsleyae
ENSHGLG00100002232	RRP1B	81	53.628	ENSPSIG00000008152	RRP1B	69	53.750	Pelodiscus_sinensis
ENSHGLG00100002232	RRP1B	99	55.130	ENSPEMG00000022490	Rrp1b	86	65.976	Peromyscus_maniculatus_bairdii
ENSHGLG00100002232	RRP1B	86	63.977	ENSPCIG00000015513	RRP1B	75	67.785	Phascolarctos_cinereus
ENSHGLG00100002232	RRP1B	58	39.474	ENSPFOG00000007424	-	57	39.474	Poecilia_formosa
ENSHGLG00100002232	RRP1B	56	43.284	ENSPMEG00000007042	-	51	43.284	Poecilia_mexicana
ENSHGLG00100002232	RRP1B	56	43.939	ENSPREG00000015673	-	51	43.939	Poecilia_reticulata
ENSHGLG00100002232	RRP1B	99	58.445	ENSPPYG00000011470	RRP1B	91	68.116	Pongo_abelii
ENSHGLG00100002232	RRP1B	88	81.944	ENSPCAG00000013723	RRP1B	70	81.944	Procavia_capensis
ENSHGLG00100002232	RRP1B	99	59.434	ENSPCOG00000017927	RRP1B	92	67.697	Propithecus_coquereli
ENSHGLG00100002232	RRP1B	78	59.244	ENSPVAG00000001436	RRP1B	77	59.244	Pteropus_vampyrus
ENSHGLG00100002232	RRP1B	54	38.043	ENSRNOG00000001203	Rrp1	76	40.173	Rattus_norvegicus
ENSHGLG00100002232	RRP1B	99	54.509	ENSRNOG00000001194	Rrp1b	88	66.272	Rattus_norvegicus
ENSHGLG00100002232	RRP1B	99	53.816	ENSRBIG00000041689	RRP1B	89	62.424	Rhinopithecus_bieti
ENSHGLG00100002232	RRP1B	99	57.763	ENSRROG00000031499	RRP1B	92	68.539	Rhinopithecus_roxellana
ENSHGLG00100002232	RRP1B	99	55.102	ENSSBOG00000034727	RRP1B	97	63.613	Saimiri_boliviensis_boliviensis
ENSHGLG00100002232	RRP1B	50	40.805	ENSSBOG00000034689	RRP1	75	40.805	Saimiri_boliviensis_boliviensis
ENSHGLG00100002232	RRP1B	97	52.115	ENSSHAG00000017789	RRP1B	75	66.364	Sarcophilus_harrisii
ENSHGLG00100002232	RRP1B	55	48.696	ENSSFOG00015003932	-	56	48.696	Scleropages_formosus
ENSHGLG00100002232	RRP1B	57	44.928	ENSSMAG00000016847	-	71	39.203	Scophthalmus_maximus
ENSHGLG00100002232	RRP1B	76	54.839	ENSSARG00000003108	-	73	54.839	Sorex_araneus
ENSHGLG00100002232	RRP1B	66	47.015	ENSSPUG00000002834	RRP1B	73	43.697	Sphenodon_punctatus
ENSHGLG00100002232	RRP1B	89	58.912	ENSSSCG00000021698	RRP1B	85	57.746	Sus_scrofa
ENSHGLG00100002232	RRP1B	78	45.957	ENSTGUG00000005926	RRP1B	81	48.011	Taeniopygia_guttata
ENSHGLG00100002232	RRP1B	62	45.283	ENSTNIG00000005053	rrp1	71	37.667	Tetraodon_nigroviridis
ENSHGLG00100002232	RRP1B	77	71.429	ENSTBEG00000000422	RRP1B	96	74.522	Tupaia_belangeri
ENSHGLG00100002232	RRP1B	99	50.951	ENSTTRG00000000723	RRP1B	79	64.723	Tursiops_truncatus
ENSHGLG00100002232	RRP1B	83	65.922	ENSUAMG00000026765	RRP1B	83	65.915	Ursus_americanus
ENSHGLG00100002232	RRP1B	63	74.603	ENSUMAG00000025510	RRP1B	89	73.810	Ursus_maritimus
ENSHGLG00100002232	RRP1B	99	55.270	ENSVVUG00000024509	RRP1B	82	66.573	Vulpes_vulpes
ENSHGLG00100002232	RRP1B	52	45.631	ENSXETG00000013683	rrp1b	56	45.631	Xenopus_tropicalis
ENSHGLG00100002232	RRP1B	51	48.958	ENSXMAG00000023123	-	50	48.958	Xiphophorus_maculatus