EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100002350 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 60761 bases
Position: chrJH165899.1:92013-152773
Accession: 101696465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100003067	zf-C2H2	PF00096.26	7.2e-33	1	5
ENSHGLP00100003067	zf-C2H2	PF00096.26	7.2e-33	2	5
ENSHGLP00100003067	zf-C2H2	PF00096.26	7.2e-33	3	5
ENSHGLP00100003067	zf-C2H2	PF00096.26	7.2e-33	4	5
ENSHGLP00100003067	zf-C2H2	PF00096.26	7.2e-33	5	5
ENSHGLP00100003068	zf-C2H2	PF00096.26	4.2e-28	1	4
ENSHGLP00100003068	zf-C2H2	PF00096.26	4.2e-28	2	4
ENSHGLP00100003068	zf-C2H2	PF00096.26	4.2e-28	3	4
ENSHGLP00100003068	zf-C2H2	PF00096.26	4.2e-28	4	4
ENSHGLP00100003068	zf-met	PF12874.7	5.9e-09	1	2
ENSHGLP00100003068	zf-met	PF12874.7	5.9e-09	2	2
ENSHGLP00100003067	zf-met	PF12874.7	9.1e-06	1	2
ENSHGLP00100003067	zf-met	PF12874.7	9.1e-06	2	2
ENSHGLP00100003067	zf-C2H2_jaz	PF12171.8	7.2e-17	1	1
ENSHGLP00100003068	zf-C2H2_jaz	PF12171.8	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100003124	PRDM10-201	3606	XM_013078830	ENSHGLP00100003067	1162 (aa)	XP_012934284	-
ENSHGLT00100003125	PRDM10-202	3345	-	ENSHGLP00100003068	1114 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100002350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100002350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100002350	PRDM10	50	35.052	ENSHGLG00100003696	PRDM5	98	36.264
ENSHGLG00100002350	PRDM10	53	34.409	ENSHGLG00100007268	-	74	34.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100002350	PRDM10	100	92.577	ENSG00000170325	PRDM10	100	94.211	Homo_sapiens
ENSHGLG00100002350	PRDM10	97	94.737	ENSAMEG00000002425	PRDM10	100	87.809	Ailuropoda_melanoleuca
ENSHGLG00100002350	PRDM10	100	82.908	ENSAPLG00000004858	PRDM10	100	82.823	Anas_platyrhynchos
ENSHGLG00100002350	PRDM10	100	74.087	ENSANAG00000022064	PRDM10	100	77.872	Aotus_nancymaae
ENSHGLG00100002350	PRDM10	100	90.273	ENSBTAG00000019001	PRDM10	100	90.023	Bos_taurus
ENSHGLG00100002350	PRDM10	100	92.406	ENSCJAG00000009235	PRDM10	100	92.235	Callithrix_jacchus
ENSHGLG00100002350	PRDM10	97	95.000	ENSCAFG00000010164	PRDM10	100	91.065	Canis_familiaris
ENSHGLG00100002350	PRDM10	97	95.000	ENSCAFG00020010152	PRDM10	100	89.958	Canis_lupus_dingo
ENSHGLG00100002350	PRDM10	100	90.358	ENSCHIG00000026530	PRDM10	100	89.846	Capra_hircus
ENSHGLG00100002350	PRDM10	100	93.345	ENSTSYG00000000544	PRDM10	100	93.259	Carlito_syrichta
ENSHGLG00100002350	PRDM10	100	87.330	ENSCAPG00000017296	PRDM10	100	87.415	Cavia_aperea
ENSHGLG00100002350	PRDM10	99	87.982	ENSCPOG00000000389	PRDM10	98	87.982	Cavia_porcellus
ENSHGLG00100002350	PRDM10	100	92.406	ENSCCAG00000024567	PRDM10	100	92.321	Cebus_capucinus
ENSHGLG00100002350	PRDM10	100	92.491	ENSCATG00000040031	PRDM10	100	92.577	Cercocebus_atys
ENSHGLG00100002350	PRDM10	100	96.902	ENSCLAG00000014605	PRDM10	100	96.902	Chinchilla_lanigera
ENSHGLG00100002350	PRDM10	100	92.406	ENSCSAG00000002202	PRDM10	100	92.491	Chlorocebus_sabaeus
ENSHGLG00100002350	PRDM10	99	85.119	ENSCPBG00000026880	PRDM10	99	80.510	Chrysemys_picta_bellii
ENSHGLG00100002350	PRDM10	100	92.406	ENSCANG00000032669	PRDM10	100	92.321	Colobus_angolensis_palliatus
ENSHGLG00100002350	PRDM10	100	91.688	ENSCGRG00001021647	Prdm10	99	92.683	Cricetulus_griseus_chok1gshd
ENSHGLG00100002350	PRDM10	100	91.688	ENSCGRG00000006562	Prdm10	99	92.683	Cricetulus_griseus_crigri
ENSHGLG00100002350	PRDM10	81	92.511	ENSDNOG00000001366	PRDM10	95	92.511	Dasypus_novemcinctus
ENSHGLG00100002350	PRDM10	100	92.182	ENSDORG00000014292	Prdm10	100	92.268	Dipodomys_ordii
ENSHGLG00100002350	PRDM10	96	98.529	ENSEASG00005022914	PRDM10	100	91.638	Equus_asinus_asinus
ENSHGLG00100002350	PRDM10	96	98.529	ENSECAG00000011499	PRDM10	100	91.553	Equus_caballus
ENSHGLG00100002350	PRDM10	98	91.130	ENSFCAG00000004111	PRDM10	96	91.130	Felis_catus
ENSHGLG00100002350	PRDM10	97	85.373	ENSFALG00000004873	PRDM10	100	79.901	Ficedula_albicollis
ENSHGLG00100002350	PRDM10	100	97.274	ENSFDAG00000017311	PRDM10	100	97.274	Fukomys_damarensis
ENSHGLG00100002350	PRDM10	97	85.615	ENSGALG00000033660	PRDM10	99	83.112	Gallus_gallus
ENSHGLG00100002350	PRDM10	99	65.096	ENSGACG00000012293	prdm10	100	63.874	Gasterosteus_aculeatus
ENSHGLG00100002350	PRDM10	99	83.746	ENSGAGG00000012523	PRDM10	99	81.710	Gopherus_agassizii
ENSHGLG00100002350	PRDM10	100	92.747	ENSGGOG00000015359	PRDM10	100	92.747	Gorilla_gorilla
ENSHGLG00100002350	PRDM10	100	100.000	ENSHGLG00000001106	PRDM10	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100002350	PRDM10	100	93.430	ENSSTOG00000002015	PRDM10	100	93.345	Ictidomys_tridecemlineatus
ENSHGLG00100002350	PRDM10	80	92.804	ENSJJAG00000021493	Prdm10	90	92.324	Jaculus_jaculus
ENSHGLG00100002350	PRDM10	100	89.626	ENSLAFG00000031867	PRDM10	100	89.541	Loxodonta_africana
ENSHGLG00100002350	PRDM10	100	92.406	ENSMFAG00000031008	PRDM10	100	92.491	Macaca_fascicularis
ENSHGLG00100002350	PRDM10	100	92.406	ENSMMUG00000017555	PRDM10	100	92.491	Macaca_mulatta
ENSHGLG00100002350	PRDM10	100	92.321	ENSMNEG00000036493	PRDM10	100	92.406	Macaca_nemestrina
ENSHGLG00100002350	PRDM10	84	98.795	ENSMLEG00000042028	PRDM10	98	92.667	Mandrillus_leucophaeus
ENSHGLG00100002350	PRDM10	97	85.473	ENSMGAG00000001112	PRDM10	100	79.802	Meleagris_gallopavo
ENSHGLG00100002350	PRDM10	100	92.235	ENSMICG00000013888	PRDM10	100	92.321	Microcebus_murinus
ENSHGLG00100002350	PRDM10	98	92.707	ENSMOCG00000021853	Prdm10	100	92.252	Microtus_ochrogaster
ENSHGLG00100002350	PRDM10	80	85.066	ENSMODG00000004979	PRDM10	99	85.556	Monodelphis_domestica
ENSHGLG00100002350	PRDM10	97	94.737	ENSMUSG00000042496	Prdm10	99	91.630	Mus_musculus
ENSHGLG00100002350	PRDM10	100	91.795	MGP_SPRETEiJ_G0033061	-	100	91.709	Mus_spretus
ENSHGLG00100002350	PRDM10	100	90.956	ENSMPUG00000008711	PRDM10	99	90.956	Mustela_putorius_furo
ENSHGLG00100002350	PRDM10	100	89.711	ENSMLUG00000013051	PRDM10	100	89.796	Myotis_lucifugus
ENSHGLG00100002350	PRDM10	100	92.955	ENSNGAG00000000580	Prdm10	100	92.955	Nannospalax_galili
ENSHGLG00100002350	PRDM10	100	92.235	ENSNLEG00000007488	PRDM10	100	92.321	Nomascus_leucogenys
ENSHGLG00100002350	PRDM10	99	93.057	ENSODEG00000005309	PRDM10	100	93.057	Octodon_degus
ENSHGLG00100002350	PRDM10	100	78.301	ENSOANG00000000577	-	100	77.292	Ornithorhynchus_anatinus
ENSHGLG00100002350	PRDM10	100	89.932	ENSOCUG00000003736	PRDM10	100	89.932	Oryctolagus_cuniculus
ENSHGLG00100002350	PRDM10	100	90.901	ENSOGAG00000010723	PRDM10	100	90.646	Otolemur_garnettii
ENSHGLG00100002350	PRDM10	100	90.444	ENSOARG00000014507	PRDM10	100	89.932	Ovis_aries
ENSHGLG00100002350	PRDM10	100	92.577	ENSPPAG00000042881	PRDM10	100	92.577	Pan_paniscus
ENSHGLG00100002350	PRDM10	100	90.700	ENSPPRG00000007002	PRDM10	100	90.785	Panthera_pardus
ENSHGLG00100002350	PRDM10	100	90.785	ENSPTIG00000013331	PRDM10	100	90.870	Panthera_tigris_altaica
ENSHGLG00100002350	PRDM10	100	92.577	ENSPTRG00000004477	PRDM10	100	92.577	Pan_troglodytes
ENSHGLG00100002350	PRDM10	100	92.491	ENSPANG00000017470	PRDM10	100	92.577	Papio_anubis
ENSHGLG00100002350	PRDM10	99	92.709	ENSPEMG00000014985	Prdm10	99	92.709	Peromyscus_maniculatus_bairdii
ENSHGLG00100002350	PRDM10	100	92.662	ENSPPYG00000004061	PRDM10	100	92.577	Pongo_abelii
ENSHGLG00100002350	PRDM10	89	96.364	ENSPCAG00000014514	PRDM10	92	96.364	Procavia_capensis
ENSHGLG00100002350	PRDM10	100	78.468	ENSPCOG00000023406	PRDM10	100	78.383	Propithecus_coquereli
ENSHGLG00100002350	PRDM10	100	91.327	ENSPVAG00000012764	PRDM10	100	91.156	Pteropus_vampyrus
ENSHGLG00100002350	PRDM10	100	92.367	ENSRNOG00000007853	Prdm10	100	92.281	Rattus_norvegicus
ENSHGLG00100002350	PRDM10	100	92.577	ENSRBIG00000030924	PRDM10	100	92.491	Rhinopithecus_bieti
ENSHGLG00100002350	PRDM10	100	92.577	ENSRROG00000034334	PRDM10	100	92.491	Rhinopithecus_roxellana
ENSHGLG00100002350	PRDM10	100	92.406	ENSSBOG00000008773	PRDM10	100	92.321	Saimiri_boliviensis_boliviensis
ENSHGLG00100002350	PRDM10	97	89.610	ENSSHAG00000004503	PRDM10	99	85.302	Sarcophilus_harrisii
ENSHGLG00100002350	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSHGLG00100002350	PRDM10	100	80.222	ENSSPUG00000001178	PRDM10	97	83.086	Sphenodon_punctatus
ENSHGLG00100002350	PRDM10	97	94.805	ENSSSCG00000015243	PRDM10	100	92.695	Sus_scrofa
ENSHGLG00100002350	PRDM10	97	85.317	ENSTGUG00000000530	PRDM10	100	82.019	Taeniopygia_guttata
ENSHGLG00100002350	PRDM10	91	98.561	ENSTBEG00000007221	PRDM10	86	98.561	Tupaia_belangeri
ENSHGLG00100002350	PRDM10	100	89.523	ENSTTRG00000009189	PRDM10	100	88.927	Tursiops_truncatus
ENSHGLG00100002350	PRDM10	91	91.086	ENSUAMG00000018832	PRDM10	96	91.179	Ursus_americanus
ENSHGLG00100002350	PRDM10	97	92.822	ENSUMAG00000003167	PRDM10	98	92.034	Ursus_maritimus
ENSHGLG00100002350	PRDM10	100	90.700	ENSVVUG00000019878	PRDM10	100	90.785	Vulpes_vulpes
ENSHGLG00100002350	PRDM10	98	72.266	ENSXETG00000032173	PRDM10	100	67.023	Xenopus_tropicalis