EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100002829 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 9791 bases
Position: chrJH172329.1:221485-231275
Accession: 12874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100003714	zf-C2H2	PF00096.26	4.1e-12	1	2
ENSHGLP00100003714	zf-C2H2	PF00096.26	4.1e-12	2	2
ENSHGLP00100003713	zf-C2H2	PF00096.26	2.6e-11	1	2
ENSHGLP00100003713	zf-C2H2	PF00096.26	2.6e-11	2	2
ENSHGLP00100003713	zf-met	PF12874.7	2.7e-05	1	1
ENSHGLP00100003714	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100003773	ZIC3-201	717	-	ENSHGLP00100003713	238 (aa)	-	-
ENSHGLT00100003774	ZIC3-202	747	-	ENSHGLP00100003714	248 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100002829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100002829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100002829	ZIC3	54	37.975	ENSHGLG00100016493	-	63	37.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100002829	ZIC3	100	77.070	ENSG00000156925	ZIC3	67	69.737	Homo_sapiens
ENSHGLG00100002829	ZIC3	100	77.389	ENSANAG00000019614	ZIC3	67	69.408	Aotus_nancymaae
ENSHGLG00100002829	ZIC3	100	77.070	ENSCJAG00000013792	ZIC3	67	69.408	Callithrix_jacchus
ENSHGLG00100002829	ZIC3	100	77.707	ENSCAFG00000018979	ZIC3	67	69.737	Canis_familiaris
ENSHGLG00100002829	ZIC3	100	77.389	ENSTSYG00000003356	ZIC3	67	70.066	Carlito_syrichta
ENSHGLG00100002829	ZIC3	73	67.073	ENSCPOG00000002374	ZIC3	100	60.163	Cavia_porcellus
ENSHGLG00100002829	ZIC3	100	77.389	ENSCCAG00000025983	ZIC3	67	69.737	Cebus_capucinus
ENSHGLG00100002829	ZIC3	100	77.389	ENSCATG00000036569	ZIC3	67	70.066	Cercocebus_atys
ENSHGLG00100002829	ZIC3	100	77.389	ENSCLAG00000001934	ZIC3	67	69.737	Chinchilla_lanigera
ENSHGLG00100002829	ZIC3	99	68.354	ENSCPBG00000026115	ZIC3	74	59.494	Chrysemys_picta_bellii
ENSHGLG00100002829	ZIC3	100	77.707	ENSCANG00000017505	ZIC3	67	70.395	Colobus_angolensis_palliatus
ENSHGLG00100002829	ZIC3	100	77.389	ENSCGRG00001024527	Zic3	67	68.471	Cricetulus_griseus_chok1gshd
ENSHGLG00100002829	ZIC3	100	77.389	ENSDORG00000025481	Zic3	67	68.627	Dipodomys_ordii
ENSHGLG00100002829	ZIC3	100	77.707	ENSFCAG00000025684	ZIC3	67	69.737	Felis_catus
ENSHGLG00100002829	ZIC3	100	78.344	ENSFDAG00000014929	ZIC3	100	61.382	Fukomys_damarensis
ENSHGLG00100002829	ZIC3	91	58.703	ENSGAGG00000004149	ZIC3	61	59.483	Gopherus_agassizii
ENSHGLG00100002829	ZIC3	100	77.070	ENSGGOG00000011914	ZIC3	67	69.737	Gorilla_gorilla
ENSHGLG00100002829	ZIC3	100	78.662	ENSHGLG00000006298	ZIC3	67	71.711	Heterocephalus_glaber_female
ENSHGLG00100002829	ZIC3	100	77.707	ENSJJAG00000022714	Zic3	67	70.066	Jaculus_jaculus
ENSHGLG00100002829	ZIC3	99	64.968	ENSLACG00000014597	ZIC3	70	56.051	Latimeria_chalumnae
ENSHGLG00100002829	ZIC3	100	76.115	ENSLAFG00000007048	ZIC3	81	67.197	Loxodonta_africana
ENSHGLG00100002829	ZIC3	100	77.389	ENSMFAG00000027018	ZIC3	67	70.066	Macaca_fascicularis
ENSHGLG00100002829	ZIC3	100	76.316	ENSMMUG00000002023	ZIC3	67	70.066	Macaca_mulatta
ENSHGLG00100002829	ZIC3	100	77.389	ENSMNEG00000040682	ZIC3	67	70.066	Macaca_nemestrina
ENSHGLG00100002829	ZIC3	100	77.389	ENSMLEG00000004378	ZIC3	67	70.066	Mandrillus_leucophaeus
ENSHGLG00100002829	ZIC3	100	77.389	ENSMAUG00000009402	Zic3	67	68.471	Mesocricetus_auratus
ENSHGLG00100002829	ZIC3	100	77.389	ENSMICG00000042529	ZIC3	67	69.737	Microcebus_murinus
ENSHGLG00100002829	ZIC3	100	77.070	ENSMOCG00000020544	Zic3	68	68.153	Microtus_ochrogaster
ENSHGLG00100002829	ZIC3	100	77.070	MGP_CAROLIEiJ_G0033101	Zic3	100	60.569	Mus_caroli
ENSHGLG00100002829	ZIC3	100	77.070	ENSMUSG00000067860	Zic3	100	60.569	Mus_musculus
ENSHGLG00100002829	ZIC3	100	77.070	MGP_PahariEiJ_G0031644	Zic3	100	60.569	Mus_pahari
ENSHGLG00100002829	ZIC3	100	77.070	MGP_SPRETEiJ_G0034256	Zic3	100	60.569	Mus_spretus
ENSHGLG00100002829	ZIC3	100	77.070	ENSNGAG00000023346	Zic3	67	69.737	Nannospalax_galili
ENSHGLG00100002829	ZIC3	87	70.107	ENSNLEG00000003005	-	77	65.683	Nomascus_leucogenys
ENSHGLG00100002829	ZIC3	100	77.070	ENSODEG00000005556	ZIC3	67	69.408	Octodon_degus
ENSHGLG00100002829	ZIC3	100	77.070	ENSPPAG00000030013	ZIC3	67	69.737	Pan_paniscus
ENSHGLG00100002829	ZIC3	100	77.389	ENSPPRG00000010839	ZIC3	67	69.408	Panthera_pardus
ENSHGLG00100002829	ZIC3	100	77.070	ENSPTRG00000043849	ZIC3	67	69.737	Pan_troglodytes
ENSHGLG00100002829	ZIC3	100	77.389	ENSPANG00000011357	ZIC3	67	70.066	Papio_anubis
ENSHGLG00100002829	ZIC3	98	62.179	ENSPKIG00000017705	zic3	58	77.500	Paramormyrops_kingsleyae
ENSHGLG00100002829	ZIC3	90	64.384	ENSPSIG00000011896	ZIC3	99	58.219	Pelodiscus_sinensis
ENSHGLG00100002829	ZIC3	100	77.389	ENSPEMG00000022168	Zic3	67	68.471	Peromyscus_maniculatus_bairdii
ENSHGLG00100002829	ZIC3	100	76.752	ENSPCOG00000021557	ZIC3	67	69.079	Propithecus_coquereli
ENSHGLG00100002829	ZIC3	100	77.070	ENSRNOG00000000861	Zic3	59	76.250	Rattus_norvegicus
ENSHGLG00100002829	ZIC3	100	77.707	ENSRBIG00000030660	ZIC3	67	70.395	Rhinopithecus_bieti
ENSHGLG00100002829	ZIC3	100	77.707	ENSRROG00000028410	ZIC3	67	70.395	Rhinopithecus_roxellana
ENSHGLG00100002829	ZIC3	100	77.707	ENSSBOG00000024684	ZIC3	67	70.066	Saimiri_boliviensis_boliviensis
ENSHGLG00100002829	ZIC3	99	61.905	ENSSFOG00015011731	zic3	70	53.016	Scleropages_formosus
ENSHGLG00100002829	ZIC3	99	62.620	ENSSFOG00015008079	zic3	78	53.994	Scleropages_formosus
ENSHGLG00100002829	ZIC3	100	65.204	ENSTGUG00000002155	ZIC3	82	56.426	Taeniopygia_guttata
ENSHGLG00100002829	ZIC3	100	77.707	ENSVVUG00000021378	ZIC3	61	76.250	Vulpes_vulpes
ENSHGLG00100002829	ZIC3	98	61.218	ENSXETG00000024458	zic3	71	52.848	Xenopus_tropicalis