EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100002832 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 2081 bases
Position: chrJH168785.1:93639-95719
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100003717	La	PF05383.17	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100003778	-	942	-	ENSHGLP00100003718	313 (aa)	-	-
ENSHGLT00100003777	-	1248	-	ENSHGLP00100003717	415 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100002832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100002832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100002832	-	69	69.501	ENSHGLG00100000622	-	98	69.501
ENSHGLG00100002832	-	93	80.449	ENSHGLG00100016984	-	64	74.617
ENSHGLG00100002832	-	95	38.274	ENSHGLG00100017261	-	74	38.444
ENSHGLG00100002832	-	95	77.728	ENSHGLG00100011678	-	65	77.728
ENSHGLG00100002832	-	76	43.767	ENSHGLG00100016220	-	50	43.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100002832	-	93	74.376	ENSG00000161813	LARP4	99	74.376	Homo_sapiens
ENSHGLG00100002832	-	77	51.979	ENSAPOG00000021331	larp4ab	51	51.451	Acanthochromis_polyacanthus
ENSHGLG00100002832	-	93	74.943	ENSAMEG00000001275	LARP4	62	73.171	Ailuropoda_melanoleuca
ENSHGLG00100002832	-	79	56.011	ENSACIG00000001198	larp4aa	77	67.347	Amphilophus_citrinellus
ENSHGLG00100002832	-	81	51.134	ENSAOCG00000006387	larp4ab	53	51.134	Amphiprion_ocellaris
ENSHGLG00100002832	-	75	53.825	ENSAPEG00000015441	larp4ab	98	53.825	Amphiprion_percula
ENSHGLG00100002832	-	75	49.734	ENSATEG00000001018	larp4ab	50	49.734	Anabas_testudineus
ENSHGLG00100002832	-	92	63.431	ENSAPLG00000013661	LARP4	61	59.735	Anas_platyrhynchos
ENSHGLG00100002832	-	93	59.641	ENSACAG00000017133	LARP4	59	59.955	Anolis_carolinensis
ENSHGLG00100002832	-	93	73.182	ENSANAG00000029342	LARP4	63	71.024	Aotus_nancymaae
ENSHGLG00100002832	-	76	50.413	ENSACLG00000000777	larp4ab	99	50.413	Astatotilapia_calliptera
ENSHGLG00100002832	-	77	52.139	ENSAMXG00000001515	larp4ab	50	52.051	Astyanax_mexicanus
ENSHGLG00100002832	-	93	74.501	ENSBTAG00000017164	LARP4	63	72.786	Bos_taurus
ENSHGLG00100002832	-	93	73.696	ENSCJAG00000021131	LARP4	68	66.667	Callithrix_jacchus
ENSHGLG00100002832	-	93	75.854	ENSCAFG00000008174	LARP4	63	67.028	Canis_familiaris
ENSHGLG00100002832	-	92	76.552	ENSCAFG00020014554	LARP4	64	72.286	Canis_lupus_dingo
ENSHGLG00100002832	-	93	74.279	ENSCHIG00000025965	LARP4	63	72.570	Capra_hircus
ENSHGLG00100002832	-	93	75.057	ENSTSYG00000004342	LARP4	63	73.289	Carlito_syrichta
ENSHGLG00100002832	-	90	61.631	ENSCAPG00000012942	LARP4	56	62.110	Cavia_aperea
ENSHGLG00100002832	-	93	72.936	ENSCPOG00000020519	LARP4	61	64.732	Cavia_porcellus
ENSHGLG00100002832	-	93	73.469	ENSCCAG00000024439	LARP4	63	71.744	Cebus_capucinus
ENSHGLG00100002832	-	92	75.982	ENSCATG00000044528	LARP4	62	74.157	Cercocebus_atys
ENSHGLG00100002832	-	93	78.132	ENSCLAG00000001829	LARP4	62	76.275	Chinchilla_lanigera
ENSHGLG00100002832	-	93	64.509	ENSCPBG00000019407	LARP4	56	60.175	Chrysemys_picta_bellii
ENSHGLG00100002832	-	93	71.059	ENSCANG00000033097	-	84	60.606	Colobus_angolensis_palliatus
ENSHGLG00100002832	-	93	75.283	ENSCANG00000029159	-	63	73.510	Colobus_angolensis_palliatus
ENSHGLG00100002832	-	98	70.825	ENSCGRG00001010818	Larp4	62	72.627	Cricetulus_griseus_chok1gshd
ENSHGLG00100002832	-	98	70.488	ENSCGRG00000009382	Larp4	62	72.422	Cricetulus_griseus_crigri
ENSHGLG00100002832	-	89	50.585	ENSDARG00000074979	larp4ab	75	67.606	Danio_rerio
ENSHGLG00100002832	-	93	75.737	ENSDNOG00000038525	LARP4	62	73.951	Dasypus_novemcinctus
ENSHGLG00100002832	-	93	72.500	ENSDORG00000004013	Larp4	62	69.248	Dipodomys_ordii
ENSHGLG00100002832	-	82	42.105	ENSEBUG00000010394	LARP4	59	42.105	Eptatretus_burgeri
ENSHGLG00100002832	-	92	72.414	ENSEASG00005004356	LARP4	98	70.400	Equus_asinus_asinus
ENSHGLG00100002832	-	93	76.644	ENSECAG00000012479	LARP4	62	74.834	Equus_caballus
ENSHGLG00100002832	-	77	60.245	ENSELUG00000000395	larp4aa	50	60.245	Esox_lucius
ENSHGLG00100002832	-	73	59.164	ENSELUG00000018650	larp4ab	53	57.812	Esox_lucius
ENSHGLG00100002832	-	93	75.964	ENSFCAG00000031897	LARP4	67	72.345	Felis_catus
ENSHGLG00100002832	-	93	63.575	ENSFALG00000002114	LARP4	67	60.633	Ficedula_albicollis
ENSHGLG00100002832	-	93	78.685	ENSFDAG00000006406	-	63	71.082	Fukomys_damarensis
ENSHGLG00100002832	-	94	44.921	ENSFHEG00000013854	larp4ab	60	44.921	Fundulus_heteroclitus
ENSHGLG00100002832	-	80	55.409	ENSGMOG00000008246	larp4aa	50	55.409	Gadus_morhua
ENSHGLG00100002832	-	67	42.690	ENSGMOG00000009536	-	50	42.690	Gadus_morhua
ENSHGLG00100002832	-	93	64.877	ENSGALG00000042122	LARP4	59	64.877	Gallus_gallus
ENSHGLG00100002832	-	77	49.211	ENSGAFG00000021777	larp4ab	51	49.211	Gambusia_affinis
ENSHGLG00100002832	-	67	66.197	ENSGAFG00000004280	larp4aa	75	66.197	Gambusia_affinis
ENSHGLG00100002832	-	88	45.755	ENSGACG00000000680	larp4ab	59	46.875	Gasterosteus_aculeatus
ENSHGLG00100002832	-	79	53.846	ENSGACG00000008381	larp4aa	99	55.435	Gasterosteus_aculeatus
ENSHGLG00100002832	-	93	64.206	ENSGAGG00000006969	LARP4	61	59.649	Gopherus_agassizii
ENSHGLG00100002832	-	93	73.576	ENSGGOG00000015230	LARP4	88	78.994	Gorilla_gorilla
ENSHGLG00100002832	-	79	54.497	ENSHBUG00000023074	larp4aa	51	54.005	Haplochromis_burtoni
ENSHGLG00100002832	-	93	81.179	ENSHGLG00000005513	-	69	75.276	Heterocephalus_glaber_female
ENSHGLG00100002832	-	100	100.000	ENSHGLG00000010979	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100002832	-	83	79.379	ENSHGLG00000013875	-	59	79.379	Heterocephalus_glaber_female
ENSHGLG00100002832	-	77	47.644	ENSHCOG00000020857	larp4ab	50	47.644	Hippocampus_comes
ENSHGLG00100002832	-	79	53.083	ENSIPUG00000021659	larp4ab	61	52.099	Ictalurus_punctatus
ENSHGLG00100002832	-	75	57.103	ENSIPUG00000007514	larp4aa	50	54.020	Ictalurus_punctatus
ENSHGLG00100002832	-	93	76.871	ENSSTOG00000003553	LARP4	62	75.055	Ictidomys_tridecemlineatus
ENSHGLG00100002832	-	74	62.571	ENSJJAG00000014649	-	94	72.840	Jaculus_jaculus
ENSHGLG00100002832	-	77	50.396	ENSKMAG00000018556	larp4ab	51	50.396	Kryptolebias_marmoratus
ENSHGLG00100002832	-	91	53.407	ENSLACG00000019090	LARP4	61	54.066	Latimeria_chalumnae
ENSHGLG00100002832	-	92	51.717	ENSLOCG00000007113	larp4ab	56	51.717	Lepisosteus_oculatus
ENSHGLG00100002832	-	93	74.150	ENSLAFG00000005160	LARP4	54	85.437	Loxodonta_africana
ENSHGLG00100002832	-	93	75.964	ENSMFAG00000043681	LARP4	64	74.172	Macaca_fascicularis
ENSHGLG00100002832	-	93	75.455	ENSMMUG00000008172	LARP4	63	73.203	Macaca_mulatta
ENSHGLG00100002832	-	71	58.333	ENSMNEG00000037799	-	63	67.227	Macaca_nemestrina
ENSHGLG00100002832	-	80	80.178	ENSMNEG00000034602	LARP4	54	77.714	Macaca_nemestrina
ENSHGLG00100002832	-	93	75.964	ENSMLEG00000039661	LARP4	63	74.172	Mandrillus_leucophaeus
ENSHGLG00100002832	-	77	49.737	ENSMAMG00000002616	larp4ab	51	49.737	Mastacembelus_armatus
ENSHGLG00100002832	-	76	50.413	ENSMZEG00005007771	larp4ab	99	50.413	Maylandia_zebra
ENSHGLG00100002832	-	93	63.453	ENSMGAG00000010598	LARP4	59	63.453	Meleagris_gallopavo
ENSHGLG00100002832	-	92	74.873	ENSMICG00000030156	-	88	73.697	Microcebus_murinus
ENSHGLG00100002832	-	79	81.381	ENSMICG00000012388	-	54	78.841	Microcebus_murinus
ENSHGLG00100002832	-	93	73.469	ENSMOCG00000020635	Larp4	61	73.469	Microtus_ochrogaster
ENSHGLG00100002832	-	73	52.450	ENSMMOG00000021861	larp4ab	91	48.936	Mola_mola
ENSHGLG00100002832	-	69	60.870	ENSMALG00000018631	larp4aa	74	67.347	Monopterus_albus
ENSHGLG00100002832	-	93	64.692	MGP_CAROLIEiJ_G0020281	Larp4	85	64.286	Mus_caroli
ENSHGLG00100002832	-	93	75.510	ENSMUSG00000023025	Larp4	74	68.212	Mus_musculus
ENSHGLG00100002832	-	93	75.737	MGP_PahariEiJ_G0020284	Larp4	62	73.951	Mus_pahari
ENSHGLG00100002832	-	92	75.799	ENSMPUG00000008706	LARP4	60	74.000	Mustela_putorius_furo
ENSHGLG00100002832	-	93	73.923	ENSMLUG00000012513	-	62	72.185	Myotis_lucifugus
ENSHGLG00100002832	-	93	74.150	ENSNGAG00000001577	-	62	72.406	Nannospalax_galili
ENSHGLG00100002832	-	76	52.754	ENSNBRG00000015675	larp4ab	99	52.754	Neolamprologus_brichardi
ENSHGLG00100002832	-	93	75.113	ENSNLEG00000017798	LARP4	63	73.510	Nomascus_leucogenys
ENSHGLG00100002832	-	62	79.104	ENSOPRG00000004592	-	52	79.104	Ochotona_princeps
ENSHGLG00100002832	-	91	77.880	ENSODEG00000009770	LARP4	63	71.525	Octodon_degus
ENSHGLG00100002832	-	85	47.445	ENSONIG00000019124	larp4ab	56	46.715	Oreochromis_niloticus
ENSHGLG00100002832	-	92	62.980	ENSOANG00000004373	LARP4	80	56.954	Ornithorhynchus_anatinus
ENSHGLG00100002832	-	93	74.830	ENSOCUG00000026872	-	62	72.926	Oryctolagus_cuniculus
ENSHGLG00100002832	-	93	74.603	ENSOCUG00000021417	-	61	74.603	Oryctolagus_cuniculus
ENSHGLG00100002832	-	77	58.708	ENSOMEG00000019749	larp4aa	97	58.046	Oryzias_melastigma
ENSHGLG00100002832	-	92	71.136	ENSOGAG00000001415	LARP4	87	69.469	Otolemur_garnettii
ENSHGLG00100002832	-	93	73.171	ENSOARG00000017702	LARP4	63	71.490	Ovis_aries
ENSHGLG00100002832	-	86	61.576	ENSPPAG00000039122	-	96	61.576	Pan_paniscus
ENSHGLG00100002832	-	93	74.376	ENSPPAG00000035100	LARP4	68	72.627	Pan_paniscus
ENSHGLG00100002832	-	93	76.190	ENSPPRG00000004522	LARP4	62	72.566	Panthera_pardus
ENSHGLG00100002832	-	93	76.190	ENSPTIG00000015617	LARP4	62	72.566	Panthera_tigris_altaica
ENSHGLG00100002832	-	93	74.603	ENSPTRG00000004935	LARP4	63	72.848	Pan_troglodytes
ENSHGLG00100002832	-	86	61.576	ENSPTRG00000045907	-	98	62.363	Pan_troglodytes
ENSHGLG00100002832	-	93	74.944	ENSPANG00000022964	LARP4	63	73.203	Papio_anubis
ENSHGLG00100002832	-	81	55.696	ENSPKIG00000005950	larp4ab	53	53.606	Paramormyrops_kingsleyae
ENSHGLG00100002832	-	93	62.640	ENSPSIG00000015867	LARP4	61	61.937	Pelodiscus_sinensis
ENSHGLG00100002832	-	75	51.437	ENSPMGG00000002719	larp4ab	98	52.011	Periophthalmus_magnuspinnatus
ENSHGLG00100002832	-	92	74.224	ENSPEMG00000018433	Larp4	61	72.390	Peromyscus_maniculatus_bairdii
ENSHGLG00100002832	-	62	49.627	ENSPMAG00000002788	LARP4	54	47.403	Petromyzon_marinus
ENSHGLG00100002832	-	59	48.425	ENSPMAG00000001038	-	96	49.606	Petromyzon_marinus
ENSHGLG00100002832	-	93	66.219	ENSPCIG00000000384	LARP4	61	65.996	Phascolarctos_cinereus
ENSHGLG00100002832	-	77	50.267	ENSPFOG00000009764	larp4ab	51	50.267	Poecilia_formosa
ENSHGLG00100002832	-	79	56.568	ENSPFOG00000013148	larp4aa	56	56.267	Poecilia_formosa
ENSHGLG00100002832	-	77	50.267	ENSPLAG00000008502	larp4ab	51	50.267	Poecilia_latipinna
ENSHGLG00100002832	-	77	49.733	ENSPMEG00000002720	larp4ab	51	49.733	Poecilia_mexicana
ENSHGLG00100002832	-	75	50.273	ENSPREG00000016263	larp4ab	99	54.327	Poecilia_reticulata
ENSHGLG00100002832	-	93	73.982	ENSPPYG00000004512	-	88	72.247	Pongo_abelii
ENSHGLG00100002832	-	80	64.249	ENSPCAG00000003671	LARP4	59	62.563	Procavia_capensis
ENSHGLG00100002832	-	77	73.190	ENSPCOG00000026291	LARP4	59	71.762	Propithecus_coquereli
ENSHGLG00100002832	-	80	66.321	ENSPVAG00000016840	LARP4	56	64.573	Pteropus_vampyrus
ENSHGLG00100002832	-	75	59.459	ENSPNAG00000014478	larp4ab	50	53.368	Pygocentrus_nattereri
ENSHGLG00100002832	-	81	57.033	ENSPNAG00000024770	larp4aa	51	56.633	Pygocentrus_nattereri
ENSHGLG00100002832	-	80	75.519	ENSRBIG00000036890	-	53	75.519	Rhinopithecus_bieti
ENSHGLG00100002832	-	93	75.510	ENSRBIG00000038857	-	99	75.510	Rhinopithecus_bieti
ENSHGLG00100002832	-	93	75.737	ENSRROG00000042764	-	99	75.737	Rhinopithecus_roxellana
ENSHGLG00100002832	-	93	79.795	ENSRROG00000025487	-	90	82.462	Rhinopithecus_roxellana
ENSHGLG00100002832	-	93	77.387	ENSSBOG00000026650	LARP4	60	75.366	Saimiri_boliviensis_boliviensis
ENSHGLG00100002832	-	81	71.676	ENSSHAG00000013246	-	98	71.676	Sarcophilus_harrisii
ENSHGLG00100002832	-	82	54.315	ENSSFOG00015014096	larp4ab	52	54.082	Scleropages_formosus
ENSHGLG00100002832	-	78	56.684	ENSSFOG00015003868	larp4aa	52	56.684	Scleropages_formosus
ENSHGLG00100002832	-	80	50.882	ENSSMAG00000002838	larp4ab	52	50.882	Scophthalmus_maximus
ENSHGLG00100002832	-	80	50.378	ENSSDUG00000006655	larp4ab	52	50.378	Seriola_dumerili
ENSHGLG00100002832	-	77	49.869	ENSSLDG00000001791	larp4ab	50	49.869	Seriola_lalandi_dorsalis
ENSHGLG00100002832	-	92	72.336	ENSSARG00000012469	LARP4	62	70.640	Sorex_araneus
ENSHGLG00100002832	-	93	62.838	ENSSPUG00000016552	LARP4	61	61.538	Sphenodon_punctatus
ENSHGLG00100002832	-	77	50.660	ENSSPAG00000002172	larp4ab	51	51.187	Stegastes_partitus
ENSHGLG00100002832	-	79	57.181	ENSSPAG00000007222	larp4aa	99	57.865	Stegastes_partitus
ENSHGLG00100002832	-	93	76.244	ENSSSCG00000028516	LARP4	64	72.890	Sus_scrofa
ENSHGLG00100002832	-	93	62.754	ENSTGUG00000003479	LARP4	61	62.754	Taeniopygia_guttata
ENSHGLG00100002832	-	73	56.160	ENSTRUG00000015939	larp4aa	100	56.447	Takifugu_rubripes
ENSHGLG00100002832	-	77	53.806	ENSTNIG00000015109	larp4aa	50	54.068	Tetraodon_nigroviridis
ENSHGLG00100002832	-	71	52.528	ENSTNIG00000014571	larp4ab	50	52.528	Tetraodon_nigroviridis
ENSHGLG00100002832	-	92	61.905	ENSTBEG00000005167	LARP4	63	60.619	Tupaia_belangeri
ENSHGLG00100002832	-	93	74.664	ENSTTRG00000003764	LARP4	61	74.664	Tursiops_truncatus
ENSHGLG00100002832	-	93	75.737	ENSUAMG00000013764	LARP4	99	75.737	Ursus_americanus
ENSHGLG00100002832	-	93	75.737	ENSUMAG00000008473	LARP4	63	73.951	Ursus_maritimus
ENSHGLG00100002832	-	93	73.009	ENSVPAG00000010136	LARP4	63	71.336	Vicugna_pacos
ENSHGLG00100002832	-	92	76.322	ENSVVUG00000024717	LARP4	57	78.125	Vulpes_vulpes
ENSHGLG00100002832	-	80	62.573	ENSXETG00000007283	larp4	50	61.254	Xenopus_tropicalis
ENSHGLG00100002832	-	76	49.728	ENSXCOG00000019635	larp4ab	98	53.774	Xiphophorus_couchianus
ENSHGLG00100002832	-	77	49.733	ENSXMAG00000002156	larp4ab	51	49.733	Xiphophorus_maculatus