EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100003005 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 34123 bases
Position: chrJH167687.1:66684-100806
Accession: 106007533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100003945	RRM_1	PF00076.22	8.3e-18	1	2
ENSHGLP00100003945	RRM_1	PF00076.22	8.3e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100004007	-	5084	-	ENSHGLP00100003945	517 (aa)	XP_004869213	G5AZM5

Gene Model

Click here to download ENSHGLG00100003005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003005	RNPC3	100	91.683	ENSG00000185946	RNPC3	100	92.973	Homo_sapiens
ENSHGLG00100003005	RNPC3	95	55.847	ENSAPOG00000017371	rnpc3	97	55.847	Acanthochromis_polyacanthus
ENSHGLG00100003005	RNPC3	98	90.177	ENSAMEG00000001694	RNPC3	100	89.423	Ailuropoda_melanoleuca
ENSHGLG00100003005	RNPC3	95	52.475	ENSACIG00000021043	rnpc3	97	52.475	Amphilophus_citrinellus
ENSHGLG00100003005	RNPC3	95	55.289	ENSAOCG00000014052	rnpc3	95	55.289	Amphiprion_ocellaris
ENSHGLG00100003005	RNPC3	95	55.090	ENSAPEG00000008739	rnpc3	95	55.090	Amphiprion_percula
ENSHGLG00100003005	RNPC3	95	53.892	ENSATEG00000021263	rnpc3	97	53.892	Anabas_testudineus
ENSHGLG00100003005	RNPC3	87	71.116	ENSAPLG00000015605	RNPC3	99	69.604	Anas_platyrhynchos
ENSHGLG00100003005	RNPC3	95	67.886	ENSACAG00000002029	RNPC3	96	68.675	Anolis_carolinensis
ENSHGLG00100003005	RNPC3	100	91.103	ENSANAG00000019950	RNPC3	100	91.103	Aotus_nancymaae
ENSHGLG00100003005	RNPC3	95	53.307	ENSACLG00000014702	rnpc3	96	53.307	Astatotilapia_calliptera
ENSHGLG00100003005	RNPC3	94	57.631	ENSAMXG00000033372	rnpc3	96	57.631	Astyanax_mexicanus
ENSHGLG00100003005	RNPC3	100	90.909	ENSBTAG00000019091	RNPC3	100	90.909	Bos_taurus
ENSHGLG00100003005	RNPC3	100	86.654	ENSCJAG00000035686	RNPC3	100	87.041	Callithrix_jacchus
ENSHGLG00100003005	RNPC3	100	90.734	ENSCAFG00000019972	RNPC3	100	90.734	Canis_familiaris
ENSHGLG00100003005	RNPC3	100	90.927	ENSCAFG00020011300	RNPC3	100	90.927	Canis_lupus_dingo
ENSHGLG00100003005	RNPC3	100	90.909	ENSCHIG00000020361	RNPC3	100	90.909	Capra_hircus
ENSHGLG00100003005	RNPC3	100	89.749	ENSTSYG00000030256	RNPC3	100	89.749	Carlito_syrichta
ENSHGLG00100003005	RNPC3	84	81.839	ENSCAPG00000013600	RNPC3	97	78.747	Cavia_aperea
ENSHGLG00100003005	RNPC3	100	93.617	ENSCPOG00000031638	RNPC3	100	93.617	Cavia_porcellus
ENSHGLG00100003005	RNPC3	100	91.296	ENSCCAG00000024301	RNPC3	100	91.296	Cebus_capucinus
ENSHGLG00100003005	RNPC3	98	69.428	ENSCATG00000035930	-	99	68.836	Cercocebus_atys
ENSHGLG00100003005	RNPC3	99	91.650	ENSCATG00000002086	RNPC3	99	91.650	Cercocebus_atys
ENSHGLG00100003005	RNPC3	100	89.749	ENSCLAG00000005169	RNPC3	100	89.749	Chinchilla_lanigera
ENSHGLG00100003005	RNPC3	99	91.456	ENSCSAG00000001519	RNPC3	99	91.456	Chlorocebus_sabaeus
ENSHGLG00100003005	RNPC3	95	70.825	ENSCPBG00000028311	RNPC3	95	70.825	Chrysemys_picta_bellii
ENSHGLG00100003005	RNPC3	93	36.722	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSHGLG00100003005	RNPC3	99	91.262	ENSCANG00000031444	RNPC3	99	91.262	Colobus_angolensis_palliatus
ENSHGLG00100003005	RNPC3	99	89.147	ENSCGRG00001019276	Rnpc3	100	89.147	Cricetulus_griseus_chok1gshd
ENSHGLG00100003005	RNPC3	87	89.602	ENSCGRG00000000053	Rnpc3	100	89.602	Cricetulus_griseus_crigri
ENSHGLG00100003005	RNPC3	94	53.644	ENSCSEG00000013475	rnpc3	96	53.644	Cynoglossus_semilaevis
ENSHGLG00100003005	RNPC3	94	54.076	ENSCVAG00000002645	rnpc3	97	53.740	Cyprinodon_variegatus
ENSHGLG00100003005	RNPC3	95	57.229	ENSDARG00000011247	rnpc3	93	65.318	Danio_rerio
ENSHGLG00100003005	RNPC3	100	88.975	ENSDNOG00000047498	-	100	88.975	Dasypus_novemcinctus
ENSHGLG00100003005	RNPC3	100	89.362	ENSDNOG00000044555	-	100	89.362	Dasypus_novemcinctus
ENSHGLG00100003005	RNPC3	99	89.341	ENSDORG00000027343	Rnpc3	99	89.341	Dipodomys_ordii
ENSHGLG00100003005	RNPC3	95	47.368	ENSEBUG00000002068	rnpc3	97	48.039	Eptatretus_burgeri
ENSHGLG00100003005	RNPC3	100	90.541	ENSEASG00005015957	RNPC3	100	90.541	Equus_asinus_asinus
ENSHGLG00100003005	RNPC3	100	90.927	ENSECAG00000021148	RNPC3	100	90.927	Equus_caballus
ENSHGLG00100003005	RNPC3	95	53.113	ENSELUG00000002264	rnpc3	97	50.191	Esox_lucius
ENSHGLG00100003005	RNPC3	100	90.154	ENSFCAG00000024312	RNPC3	100	90.154	Felis_catus
ENSHGLG00100003005	RNPC3	87	70.925	ENSFALG00000002580	RNPC3	99	72.249	Ficedula_albicollis
ENSHGLG00100003005	RNPC3	99	95.736	ENSFDAG00000019948	RNPC3	100	95.736	Fukomys_damarensis
ENSHGLG00100003005	RNPC3	95	50.000	ENSFHEG00000020647	rnpc3	98	49.228	Fundulus_heteroclitus
ENSHGLG00100003005	RNPC3	95	55.020	ENSGMOG00000019213	rnpc3	95	52.846	Gadus_morhua
ENSHGLG00100003005	RNPC3	95	71.515	ENSGALG00000005162	RNPC3	89	69.697	Gallus_gallus
ENSHGLG00100003005	RNPC3	95	52.800	ENSGAFG00000017236	rnpc3	96	52.811	Gambusia_affinis
ENSHGLG00100003005	RNPC3	95	54.286	ENSGACG00000002048	rnpc3	96	53.968	Gasterosteus_aculeatus
ENSHGLG00100003005	RNPC3	95	70.221	ENSGAGG00000008438	RNPC3	95	70.423	Gopherus_agassizii
ENSHGLG00100003005	RNPC3	96	75.403	ENSGGOG00000026201	-	95	75.403	Gorilla_gorilla
ENSHGLG00100003005	RNPC3	78	81.579	ENSHBUG00000015966	rnpc3	82	81.579	Haplochromis_burtoni
ENSHGLG00100003005	RNPC3	100	100.000	ENSHGLG00000001708	RNPC3	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100003005	RNPC3	95	54.473	ENSHCOG00000017135	rnpc3	97	54.473	Hippocampus_comes
ENSHGLG00100003005	RNPC3	95	55.912	ENSIPUG00000002916	rnpc3	97	55.268	Ictalurus_punctatus
ENSHGLG00100003005	RNPC3	100	91.103	ENSSTOG00000025020	RNPC3	100	91.103	Ictidomys_tridecemlineatus
ENSHGLG00100003005	RNPC3	99	87.209	ENSJJAG00000010203	Rnpc3	100	87.984	Jaculus_jaculus
ENSHGLG00100003005	RNPC3	95	53.535	ENSKMAG00000017358	rnpc3	97	52.976	Kryptolebias_marmoratus
ENSHGLG00100003005	RNPC3	95	54.032	ENSLBEG00000024901	rnpc3	95	54.032	Labrus_bergylta
ENSHGLG00100003005	RNPC3	95	63.232	ENSLACG00000005720	RNPC3	90	63.838	Latimeria_chalumnae
ENSHGLG00100003005	RNPC3	95	57.637	ENSLOCG00000007986	rnpc3	96	60.772	Lepisosteus_oculatus
ENSHGLG00100003005	RNPC3	99	89.535	ENSLAFG00000032342	RNPC3	100	89.535	Loxodonta_africana
ENSHGLG00100003005	RNPC3	99	65.764	ENSMFAG00000002917	-	99	67.446	Macaca_fascicularis
ENSHGLG00100003005	RNPC3	99	91.456	ENSMFAG00000002004	RNPC3	99	91.456	Macaca_fascicularis
ENSHGLG00100003005	RNPC3	82	83.256	ENSMMUG00000002098	-	91	83.256	Macaca_mulatta
ENSHGLG00100003005	RNPC3	99	91.456	ENSMMUG00000018039	RNPC3	99	91.456	Macaca_mulatta
ENSHGLG00100003005	RNPC3	98	61.417	ENSMNEG00000029209	-	99	65.551	Macaca_nemestrina
ENSHGLG00100003005	RNPC3	99	86.796	ENSMNEG00000033950	RNPC3	99	86.796	Macaca_nemestrina
ENSHGLG00100003005	RNPC3	99	91.650	ENSMLEG00000033628	RNPC3	99	91.650	Mandrillus_leucophaeus
ENSHGLG00100003005	RNPC3	98	67.969	ENSMLEG00000034644	-	98	67.578	Mandrillus_leucophaeus
ENSHGLG00100003005	RNPC3	95	51.889	ENSMAMG00000007496	rnpc3	97	50.677	Mastacembelus_armatus
ENSHGLG00100003005	RNPC3	95	52.663	ENSMZEG00005020233	rnpc3	97	52.663	Maylandia_zebra
ENSHGLG00100003005	RNPC3	87	70.549	ENSMGAG00000006381	RNPC3	99	69.670	Meleagris_gallopavo
ENSHGLG00100003005	RNPC3	97	89.780	ENSMAUG00000001358	Rnpc3	100	88.953	Mesocricetus_auratus
ENSHGLG00100003005	RNPC3	99	92.248	ENSMICG00000029591	RNPC3	99	92.248	Microcebus_murinus
ENSHGLG00100003005	RNPC3	97	89.200	ENSMOCG00000013423	Rnpc3	100	88.031	Microtus_ochrogaster
ENSHGLG00100003005	RNPC3	95	50.299	ENSMMOG00000005309	rnpc3	97	49.507	Mola_mola
ENSHGLG00100003005	RNPC3	99	76.744	ENSMODG00000002946	RNPC3	99	76.744	Monodelphis_domestica
ENSHGLG00100003005	RNPC3	95	51.807	ENSMALG00000015471	rnpc3	97	51.807	Monopterus_albus
ENSHGLG00100003005	RNPC3	99	87.016	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.230	Mus_caroli
ENSHGLG00100003005	RNPC3	99	87.403	ENSMUSG00000027981	Rnpc3	100	87.403	Mus_musculus
ENSHGLG00100003005	RNPC3	99	87.209	MGP_PahariEiJ_G0027001	Rnpc3	100	87.426	Mus_pahari
ENSHGLG00100003005	RNPC3	99	87.209	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.426	Mus_spretus
ENSHGLG00100003005	RNPC3	100	90.541	ENSMPUG00000007349	RNPC3	100	90.541	Mustela_putorius_furo
ENSHGLG00100003005	RNPC3	100	88.781	ENSMLUG00000028743	RNPC3	100	88.781	Myotis_lucifugus
ENSHGLG00100003005	RNPC3	99	88.911	ENSNGAG00000010939	Rnpc3	100	88.953	Nannospalax_galili
ENSHGLG00100003005	RNPC3	95	53.106	ENSNBRG00000012196	rnpc3	93	53.106	Neolamprologus_brichardi
ENSHGLG00100003005	RNPC3	100	91.489	ENSNLEG00000012013	RNPC3	100	91.489	Nomascus_leucogenys
ENSHGLG00100003005	RNPC3	100	89.942	ENSODEG00000007612	RNPC3	100	89.942	Octodon_degus
ENSHGLG00100003005	RNPC3	95	54.141	ENSONIG00000004770	rnpc3	99	54.141	Oreochromis_niloticus
ENSHGLG00100003005	RNPC3	90	77.897	ENSOANG00000008220	RNPC3	99	78.326	Ornithorhynchus_anatinus
ENSHGLG00100003005	RNPC3	100	91.103	ENSOCUG00000004016	RNPC3	100	91.103	Oryctolagus_cuniculus
ENSHGLG00100003005	RNPC3	95	53.213	ENSORLG00000005694	rnpc3	97	53.213	Oryzias_latipes
ENSHGLG00100003005	RNPC3	95	53.012	ENSORLG00020005513	rnpc3	97	51.815	Oryzias_latipes_hni
ENSHGLG00100003005	RNPC3	95	53.119	ENSORLG00015002179	rnpc3	97	51.462	Oryzias_latipes_hsok
ENSHGLG00100003005	RNPC3	95	53.507	ENSOMEG00000017737	rnpc3	97	54.600	Oryzias_melastigma
ENSHGLG00100003005	RNPC3	100	91.296	ENSOGAG00000026182	RNPC3	100	91.296	Otolemur_garnettii
ENSHGLG00100003005	RNPC3	100	91.103	ENSOARG00000018719	RNPC3	100	91.103	Ovis_aries
ENSHGLG00100003005	RNPC3	100	91.313	ENSPPAG00000037459	RNPC3	100	91.313	Pan_paniscus
ENSHGLG00100003005	RNPC3	100	74.468	ENSPPAG00000030278	-	100	74.662	Pan_paniscus
ENSHGLG00100003005	RNPC3	100	90.347	ENSPPRG00000020246	RNPC3	100	90.347	Panthera_pardus
ENSHGLG00100003005	RNPC3	98	90.354	ENSPTIG00000009887	RNPC3	100	90.354	Panthera_tigris_altaica
ENSHGLG00100003005	RNPC3	100	91.489	ENSPTRG00000033902	RNPC3	100	91.489	Pan_troglodytes
ENSHGLG00100003005	RNPC3	100	73.501	ENSPTRG00000044227	-	100	73.501	Pan_troglodytes
ENSHGLG00100003005	RNPC3	98	71.709	ENSPANG00000029957	-	100	71.120	Papio_anubis
ENSHGLG00100003005	RNPC3	99	91.650	ENSPANG00000012137	RNPC3	99	91.650	Papio_anubis
ENSHGLG00100003005	RNPC3	94	52.846	ENSPKIG00000008828	rnpc3	95	51.423	Paramormyrops_kingsleyae
ENSHGLG00100003005	RNPC3	63	70.181	ENSPSIG00000007396	RNPC3	99	69.880	Pelodiscus_sinensis
ENSHGLG00100003005	RNPC3	93	50.813	ENSPMGG00000011742	rnpc3	95	51.423	Periophthalmus_magnuspinnatus
ENSHGLG00100003005	RNPC3	88	88.403	ENSPEMG00000020112	Rnpc3	100	89.159	Peromyscus_maniculatus_bairdii
ENSHGLG00100003005	RNPC3	96	43.870	ENSPMAG00000003778	rnpc3	98	42.476	Petromyzon_marinus
ENSHGLG00100003005	RNPC3	99	77.132	ENSPCIG00000004415	-	99	77.132	Phascolarctos_cinereus
ENSHGLG00100003005	RNPC3	95	52.610	ENSPFOG00000009895	rnpc3	97	52.610	Poecilia_formosa
ENSHGLG00100003005	RNPC3	95	52.610	ENSPLAG00000012023	rnpc3	97	52.610	Poecilia_latipinna
ENSHGLG00100003005	RNPC3	95	53.000	ENSPMEG00000003663	rnpc3	97	52.811	Poecilia_mexicana
ENSHGLG00100003005	RNPC3	96	51.992	ENSPREG00000010206	rnpc3	97	52.104	Poecilia_reticulata
ENSHGLG00100003005	RNPC3	84	87.788	ENSPPYG00000001102	RNPC3	99	87.788	Pongo_abelii
ENSHGLG00100003005	RNPC3	95	53.106	ENSPNYG00000020603	rnpc3	96	53.106	Pundamilia_nyererei
ENSHGLG00100003005	RNPC3	95	53.906	ENSPNAG00000000524	rnpc3	76	63.551	Pygocentrus_nattereri
ENSHGLG00100003005	RNPC3	99	86.822	ENSRNOG00000017310	Rnpc3	100	86.822	Rattus_norvegicus
ENSHGLG00100003005	RNPC3	99	85.853	ENSRBIG00000043897	RNPC3	99	85.853	Rhinopithecus_bieti
ENSHGLG00100003005	RNPC3	99	91.650	ENSRROG00000032334	RNPC3	99	91.650	Rhinopithecus_roxellana
ENSHGLG00100003005	RNPC3	100	90.522	ENSSBOG00000024473	RNPC3	100	90.522	Saimiri_boliviensis_boliviensis
ENSHGLG00100003005	RNPC3	99	76.550	ENSSHAG00000011859	RNPC3	99	76.550	Sarcophilus_harrisii
ENSHGLG00100003005	RNPC3	96	58.235	ENSSFOG00015013055	rnpc3	99	56.298	Scleropages_formosus
ENSHGLG00100003005	RNPC3	95	51.497	ENSSMAG00000020346	rnpc3	97	50.769	Scophthalmus_maximus
ENSHGLG00100003005	RNPC3	95	53.968	ENSSDUG00000006600	rnpc3	96	54.150	Seriola_dumerili
ENSHGLG00100003005	RNPC3	95	54.167	ENSSLDG00000007979	rnpc3	96	54.348	Seriola_lalandi_dorsalis
ENSHGLG00100003005	RNPC3	96	65.800	ENSSPUG00000003872	-	93	66.000	Sphenodon_punctatus
ENSHGLG00100003005	RNPC3	95	70.791	ENSSPUG00000008539	-	94	70.994	Sphenodon_punctatus
ENSHGLG00100003005	RNPC3	95	53.753	ENSSPAG00000005633	rnpc3	97	53.187	Stegastes_partitus
ENSHGLG00100003005	RNPC3	100	89.942	ENSSSCG00000037254	RNPC3	100	88.395	Sus_scrofa
ENSHGLG00100003005	RNPC3	87	70.861	ENSTGUG00000004795	-	99	69.978	Taeniopygia_guttata
ENSHGLG00100003005	RNPC3	95	53.106	ENSTNIG00000018963	rnpc3	97	52.906	Tetraodon_nigroviridis
ENSHGLG00100003005	RNPC3	98	90.945	ENSUMAG00000007775	RNPC3	100	90.945	Ursus_maritimus
ENSHGLG00100003005	RNPC3	100	90.927	ENSVVUG00000000331	RNPC3	100	90.927	Vulpes_vulpes
ENSHGLG00100003005	RNPC3	97	51.367	ENSXETG00000025027	rnpc3	99	51.367	Xenopus_tropicalis
ENSHGLG00100003005	RNPC3	96	51.976	ENSXCOG00000005013	rnpc3	97	50.775	Xiphophorus_couchianus
ENSHGLG00100003005	RNPC3	95	52.590	ENSXMAG00000006495	rnpc3	97	52.183	Xiphophorus_maculatus