EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100003207 (Gene tree)
Gene ID: -
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 38418 bases
Position: chrJH173147.1:1318537-1356954
Accession: 17882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100004225	RRM_1	PF00076.22	3.2e-22	1	2
ENSHGLP00100004225	RRM_1	PF00076.22	3.2e-22	2	2
ENSHGLP00100004226	RRM_1	PF00076.22	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100004293	SREK1-202	1521	-	ENSHGLP00100004226	506 (aa)	-	-
ENSHGLT00100004292	SREK1-201	1821	-	ENSHGLP00100004225	606 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100003207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003207	SREK1	100	95.472	ENSG00000153914	SREK1	100	100.000	Homo_sapiens
ENSHGLG00100003207	SREK1	100	89.729	ENSAMEG00000011327	SREK1	82	90.234	Ailuropoda_melanoleuca
ENSHGLG00100003207	SREK1	51	66.409	ENSATEG00000009450	srek1	50	75.743	Anabas_testudineus
ENSHGLG00100003207	SREK1	64	85.013	ENSAPLG00000003948	-	84	90.616	Anas_platyrhynchos
ENSHGLG00100003207	SREK1	100	91.313	ENSANAG00000031358	SREK1	98	96.939	Aotus_nancymaae
ENSHGLG00100003207	SREK1	100	90.192	ENSBTAG00000007321	SREK1	98	97.959	Bos_taurus
ENSHGLG00100003207	SREK1	100	93.243	ENSCJAG00000015950	SREK1	98	96.939	Callithrix_jacchus
ENSHGLG00100003207	SREK1	100	91.440	ENSCAFG00000007560	SREK1	100	88.627	Canis_familiaris
ENSHGLG00100003207	SREK1	100	92.857	ENSTSYG00000036957	SREK1	98	100.000	Carlito_syrichta
ENSHGLG00100003207	SREK1	100	93.050	ENSCCAG00000020591	SREK1	98	96.939	Cebus_capucinus
ENSHGLG00100003207	SREK1	100	95.294	ENSCATG00000031482	SREK1	98	98.980	Cercocebus_atys
ENSHGLG00100003207	SREK1	100	96.289	ENSCLAG00000005024	SREK1	100	96.289	Chinchilla_lanigera
ENSHGLG00100003207	SREK1	66	90.476	ENSCHOG00000004956	SREK1	64	90.476	Choloepus_hoffmanni
ENSHGLG00100003207	SREK1	51	92.557	ENSCPBG00000026866	SREK1	87	94.198	Chrysemys_picta_bellii
ENSHGLG00100003207	SREK1	100	95.098	ENSCANG00000030421	SREK1	98	98.980	Colobus_angolensis_palliatus
ENSHGLG00100003207	SREK1	97	86.622	ENSCGRG00001015222	-	56	96.784	Cricetulus_griseus_chok1gshd
ENSHGLG00100003207	SREK1	97	86.622	ENSCGRG00000002130	-	56	96.784	Cricetulus_griseus_crigri
ENSHGLG00100003207	SREK1	57	98.834	ENSDNOG00000010327	SREK1	81	88.039	Dasypus_novemcinctus
ENSHGLG00100003207	SREK1	79	86.624	ENSETEG00000012977	SREK1	71	84.840	Echinops_telfairi
ENSHGLG00100003207	SREK1	100	91.829	ENSFCAG00000040658	-	100	89.020	Felis_catus
ENSHGLG00100003207	SREK1	100	66.607	ENSFALG00000009835	SREK1	74	92.669	Ficedula_albicollis
ENSHGLG00100003207	SREK1	100	95.898	ENSFDAG00000017844	SREK1	100	95.117	Fukomys_damarensis
ENSHGLG00100003207	SREK1	72	91.444	ENSGAGG00000006087	SREK1	96	93.255	Gopherus_agassizii
ENSHGLG00100003207	SREK1	100	94.902	ENSGGOG00000004737	SREK1	98	98.980	Gorilla_gorilla
ENSHGLG00100003207	SREK1	100	98.047	ENSHGLG00000001181	SREK1	100	98.047	Heterocephalus_glaber_female
ENSHGLG00100003207	SREK1	94	53.229	ENSIPUG00000016851	srek1	54	79.715	Ictalurus_punctatus
ENSHGLG00100003207	SREK1	100	93.605	ENSSTOG00000008850	SREK1	98	98.980	Ictidomys_tridecemlineatus
ENSHGLG00100003207	SREK1	100	90.963	ENSLAFG00000013853	SREK1	57	99.125	Loxodonta_africana
ENSHGLG00100003207	SREK1	100	95.294	ENSMFAG00000039823	SREK1	98	98.980	Macaca_fascicularis
ENSHGLG00100003207	SREK1	100	95.294	ENSMMUG00000014586	SREK1	100	94.314	Macaca_mulatta
ENSHGLG00100003207	SREK1	100	95.294	ENSMNEG00000030723	SREK1	98	98.980	Macaca_nemestrina
ENSHGLG00100003207	SREK1	100	95.098	ENSMLEG00000039078	SREK1	98	98.980	Mandrillus_leucophaeus
ENSHGLG00100003207	SREK1	97	86.789	ENSMAUG00000010066	-	76	97.107	Mesocricetus_auratus
ENSHGLG00100003207	SREK1	100	93.436	ENSMICG00000034959	SREK1	98	98.980	Microcebus_murinus
ENSHGLG00100003207	SREK1	98	82.422	ENSMOCG00000001536	-	76	97.107	Microtus_ochrogaster
ENSHGLG00100003207	SREK1	100	78.107	ENSMODG00000019665	SREK1	56	97.085	Monodelphis_domestica
ENSHGLG00100003207	SREK1	70	58.333	ENSMALG00000017086	srek1	91	88.889	Monopterus_albus
ENSHGLG00100003207	SREK1	100	92.636	ENSMPUG00000014736	SREK1	54	98.542	Mustela_putorius_furo
ENSHGLG00100003207	SREK1	52	99.242	ENSMLUG00000014801	SREK1	100	88.372	Myotis_lucifugus
ENSHGLG00100003207	SREK1	100	95.490	ENSNLEG00000003827	SREK1	98	98.980	Nomascus_leucogenys
ENSHGLG00100003207	SREK1	88	84.530	ENSOPRG00000012111	SREK1	62	95.906	Ochotona_princeps
ENSHGLG00100003207	SREK1	97	92.277	ENSODEG00000016450	SREK1	100	92.415	Octodon_degus
ENSHGLG00100003207	SREK1	81	80.779	ENSOANG00000005029	SREK1	66	94.719	Ornithorhynchus_anatinus
ENSHGLG00100003207	SREK1	100	89.391	ENSOCUG00000001319	SREK1	55	98.246	Oryctolagus_cuniculus
ENSHGLG00100003207	SREK1	100	89.038	ENSOARG00000006005	SREK1	54	98.251	Ovis_aries
ENSHGLG00100003207	SREK1	100	88.431	ENSPPAG00000031605	SREK1	92	100.000	Pan_paniscus
ENSHGLG00100003207	SREK1	100	90.157	ENSPPRG00000024617	SREK1	100	89.567	Panthera_pardus
ENSHGLG00100003207	SREK1	100	89.453	ENSPTIG00000006608	SREK1	83	97.590	Panthera_tigris_altaica
ENSHGLG00100003207	SREK1	100	95.098	ENSPTRG00000016936	SREK1	98	98.980	Pan_troglodytes
ENSHGLG00100003207	SREK1	100	95.294	ENSPANG00000008953	SREK1	98	98.980	Papio_anubis
ENSHGLG00100003207	SREK1	75	64.989	ENSPKIG00000025563	srek1	54	81.944	Paramormyrops_kingsleyae
ENSHGLG00100003207	SREK1	100	83.137	ENSPEMG00000024051	-	78	97.107	Peromyscus_maniculatus_bairdii
ENSHGLG00100003207	SREK1	100	95.490	ENSPPYG00000015515	SREK1	54	98.542	Pongo_abelii
ENSHGLG00100003207	SREK1	96	88.391	ENSPCAG00000004955	SREK1	86	88.798	Procavia_capensis
ENSHGLG00100003207	SREK1	100	93.050	ENSPCOG00000026230	SREK1	98	100.000	Propithecus_coquereli
ENSHGLG00100003207	SREK1	100	91.699	ENSPVAG00000009763	SREK1	82	85.798	Pteropus_vampyrus
ENSHGLG00100003207	SREK1	76	59.509	ENSPNAG00000004328	srek1	64	72.141	Pygocentrus_nattereri
ENSHGLG00100003207	SREK1	98	90.694	ENSRBIG00000033818	SREK1	98	98.980	Rhinopithecus_bieti
ENSHGLG00100003207	SREK1	100	95.294	ENSRROG00000017210	SREK1	98	98.980	Rhinopithecus_roxellana
ENSHGLG00100003207	SREK1	100	93.050	ENSSBOG00000031230	SREK1	98	96.939	Saimiri_boliviensis_boliviensis
ENSHGLG00100003207	SREK1	72	57.796	ENSSMAG00000011808	srek1	58	80.851	Scophthalmus_maximus
ENSHGLG00100003207	SREK1	76	96.512	ENSSARG00000000795	SREK1	68	97.085	Sorex_araneus
ENSHGLG00100003207	SREK1	100	93.064	ENSSSCG00000032726	SREK1	100	94.369	Sus_scrofa
ENSHGLG00100003207	SREK1	50	97.697	ENSTTRG00000009684	SREK1	52	97.697	Tursiops_truncatus
ENSHGLG00100003207	SREK1	100	92.710	ENSUMAG00000008191	SREK1	81	90.784	Ursus_maritimus
ENSHGLG00100003207	SREK1	100	91.860	ENSVPAG00000008654	SREK1	53	98.355	Vicugna_pacos
ENSHGLG00100003207	SREK1	86	64.444	ENSXETG00000021460	srek1	79	73.552	Xenopus_tropicalis