EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100003265 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 6469 bases
Position: chrJH169007.1:65123-71591
Accession: 101722009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100004306	RNA_ligase	PF09414.10	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100004373	LIG4-201	2995	-	ENSHGLP00100004306	911 (aa)	XP_004858619	G5B8M6

Gene Model

Click here to download ENSHGLG00100003265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003265	LIG4	100	89.791	ENSG00000174405	LIG4	100	89.791	Homo_sapiens
ENSHGLG00100003265	LIG4	99	64.725	ENSAPOG00000000866	lig4	99	64.945	Acanthochromis_polyacanthus
ENSHGLG00100003265	LIG4	100	86.937	ENSAMEG00000019685	LIG4	99	86.937	Ailuropoda_melanoleuca
ENSHGLG00100003265	LIG4	99	65.529	ENSACIG00000018309	lig4	99	65.749	Amphilophus_citrinellus
ENSHGLG00100003265	LIG4	99	64.505	ENSAOCG00000011768	lig4	99	64.725	Amphiprion_ocellaris
ENSHGLG00100003265	LIG4	99	64.615	ENSAPEG00000017815	lig4	99	64.835	Amphiprion_percula
ENSHGLG00100003265	LIG4	99	64.396	ENSATEG00000005583	lig4	99	64.505	Anabas_testudineus
ENSHGLG00100003265	LIG4	97	73.977	ENSAPLG00000001673	LIG4	99	73.977	Anas_platyrhynchos
ENSHGLG00100003265	LIG4	99	74.197	ENSACAG00000014566	LIG4	99	74.197	Anolis_carolinensis
ENSHGLG00100003265	LIG4	100	88.474	ENSANAG00000012446	LIG4	100	88.474	Aotus_nancymaae
ENSHGLG00100003265	LIG4	99	64.648	ENSACLG00000027051	lig4	99	64.648	Astatotilapia_calliptera
ENSHGLG00100003265	LIG4	99	64.661	ENSAMXG00000008192	lig4	94	64.661	Astyanax_mexicanus
ENSHGLG00100003265	LIG4	100	87.486	ENSBTAG00000015868	LIG4	100	87.486	Bos_taurus
ENSHGLG00100003265	LIG4	100	88.364	ENSCJAG00000014689	LIG4	100	88.364	Callithrix_jacchus
ENSHGLG00100003265	LIG4	100	88.694	ENSCAFG00000006031	LIG4	100	88.694	Canis_familiaris
ENSHGLG00100003265	LIG4	100	88.694	ENSCAFG00020021230	LIG4	100	88.694	Canis_lupus_dingo
ENSHGLG00100003265	LIG4	100	87.047	ENSCHIG00000001019	LIG4	100	87.047	Capra_hircus
ENSHGLG00100003265	LIG4	99	91.362	ENSCAPG00000006284	LIG4	99	91.362	Cavia_aperea
ENSHGLG00100003265	LIG4	100	91.328	ENSCPOG00000014266	LIG4	100	91.328	Cavia_porcellus
ENSHGLG00100003265	LIG4	100	88.584	ENSCCAG00000019971	LIG4	100	88.584	Cebus_capucinus
ENSHGLG00100003265	LIG4	100	89.133	ENSCATG00000021075	LIG4	100	89.133	Cercocebus_atys
ENSHGLG00100003265	LIG4	100	92.975	ENSCLAG00000003376	LIG4	100	92.975	Chinchilla_lanigera
ENSHGLG00100003265	LIG4	100	89.352	ENSCSAG00000000211	LIG4	100	89.352	Chlorocebus_sabaeus
ENSHGLG00100003265	LIG4	99	77.594	ENSCPBG00000023291	LIG4	100	77.015	Chrysemys_picta_bellii
ENSHGLG00100003265	LIG4	68	46.105	ENSCING00000009536	-	95	46.105	Ciona_intestinalis
ENSHGLG00100003265	LIG4	83	46.386	ENSCSAVG00000010336	-	98	46.386	Ciona_savignyi
ENSHGLG00100003265	LIG4	100	89.572	ENSCANG00000005805	LIG4	100	89.572	Colobus_angolensis_palliatus
ENSHGLG00100003265	LIG4	100	85.855	ENSCGRG00001012072	Lig4	100	85.855	Cricetulus_griseus_chok1gshd
ENSHGLG00100003265	LIG4	100	85.855	ENSCGRG00000013417	Lig4	100	85.855	Cricetulus_griseus_crigri
ENSHGLG00100003265	LIG4	97	65.227	ENSCSEG00000013905	lig4	95	65.227	Cynoglossus_semilaevis
ENSHGLG00100003265	LIG4	99	65.116	ENSCVAG00000007896	lig4	99	65.116	Cyprinodon_variegatus
ENSHGLG00100003265	LIG4	99	64.080	ENSDARG00000060620	lig4	98	64.080	Danio_rerio
ENSHGLG00100003265	LIG4	100	87.171	ENSDNOG00000000513	LIG4	100	87.171	Dasypus_novemcinctus
ENSHGLG00100003265	LIG4	100	86.937	ENSDORG00000027303	Lig4	100	86.937	Dipodomys_ordii
ENSHGLG00100003265	LIG4	89	32.281	FBgn0030506	Lig4	91	32.281	Drosophila_melanogaster
ENSHGLG00100003265	LIG4	99	83.038	ENSETEG00000015563	LIG4	100	83.370	Echinops_telfairi
ENSHGLG00100003265	LIG4	99	43.743	ENSEBUG00000014243	lig4	99	43.743	Eptatretus_burgeri
ENSHGLG00100003265	LIG4	100	88.804	ENSEASG00005022073	LIG4	100	88.804	Equus_asinus_asinus
ENSHGLG00100003265	LIG4	100	88.145	ENSECAG00000003257	LIG4	100	88.145	Equus_caballus
ENSHGLG00100003265	LIG4	99	64.829	ENSELUG00000006787	lig4	99	64.939	Esox_lucius
ENSHGLG00100003265	LIG4	100	87.706	ENSFCAG00000031985	LIG4	100	87.706	Felis_catus
ENSHGLG00100003265	LIG4	89	74.785	ENSFALG00000004214	LIG4	98	74.785	Ficedula_albicollis
ENSHGLG00100003265	LIG4	100	95.499	ENSFDAG00000008973	LIG4	100	95.499	Fukomys_damarensis
ENSHGLG00100003265	LIG4	99	64.563	ENSFHEG00000007398	lig4	89	64.673	Fundulus_heteroclitus
ENSHGLG00100003265	LIG4	85	64.729	ENSGMOG00000012843	lig4	99	64.729	Gadus_morhua
ENSHGLG00100003265	LIG4	100	73.690	ENSGALG00000016854	LIG4	100	73.690	Gallus_gallus
ENSHGLG00100003265	LIG4	98	64.660	ENSGAFG00000019779	lig4	95	64.317	Gambusia_affinis
ENSHGLG00100003265	LIG4	99	63.677	ENSGACG00000014135	lig4	99	63.677	Gasterosteus_aculeatus
ENSHGLG00100003265	LIG4	100	89.572	ENSGGOG00000027771	LIG4	100	89.572	Gorilla_gorilla
ENSHGLG00100003265	LIG4	99	64.427	ENSHBUG00000006245	lig4	99	64.427	Haplochromis_burtoni
ENSHGLG00100003265	LIG4	100	100.000	ENSHGLG00000000718	LIG4	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100003265	LIG4	99	63.956	ENSHCOG00000012010	lig4	99	63.956	Hippocampus_comes
ENSHGLG00100003265	LIG4	99	64.615	ENSIPUG00000013748	lig4	99	64.615	Ictalurus_punctatus
ENSHGLG00100003265	LIG4	100	88.694	ENSSTOG00000024303	LIG4	100	88.694	Ictidomys_tridecemlineatus
ENSHGLG00100003265	LIG4	100	87.377	ENSJJAG00000006750	Lig4	100	87.377	Jaculus_jaculus
ENSHGLG00100003265	LIG4	99	64.784	ENSKMAG00000001149	lig4	99	64.784	Kryptolebias_marmoratus
ENSHGLG00100003265	LIG4	91	65.269	ENSLBEG00000014578	lig4	100	65.509	Labrus_bergylta
ENSHGLG00100003265	LIG4	99	71.571	ENSLACG00000003282	LIG4	99	71.571	Latimeria_chalumnae
ENSHGLG00100003265	LIG4	99	68.681	ENSLOCG00000008901	lig4	98	68.681	Lepisosteus_oculatus
ENSHGLG00100003265	LIG4	100	85.652	ENSLAFG00000031152	LIG4	100	85.652	Loxodonta_africana
ENSHGLG00100003265	LIG4	100	89.572	ENSMFAG00000037235	LIG4	100	89.572	Macaca_fascicularis
ENSHGLG00100003265	LIG4	100	89.352	ENSMMUG00000008874	LIG4	100	89.352	Macaca_mulatta
ENSHGLG00100003265	LIG4	100	89.572	ENSMNEG00000023575	LIG4	100	89.572	Macaca_nemestrina
ENSHGLG00100003265	LIG4	100	89.023	ENSMLEG00000026720	LIG4	100	89.023	Mandrillus_leucophaeus
ENSHGLG00100003265	LIG4	99	64.945	ENSMAMG00000008472	lig4	99	65.165	Mastacembelus_armatus
ENSHGLG00100003265	LIG4	99	64.648	ENSMZEG00005001855	lig4	99	64.648	Maylandia_zebra
ENSHGLG00100003265	LIG4	100	74.127	ENSMGAG00000015532	LIG4	100	74.127	Meleagris_gallopavo
ENSHGLG00100003265	LIG4	100	84.083	ENSMOCG00000019000	Lig4	100	84.083	Microtus_ochrogaster
ENSHGLG00100003265	LIG4	99	64.563	ENSMMOG00000004390	lig4	99	64.563	Mola_mola
ENSHGLG00100003265	LIG4	100	81.888	ENSMODG00000025064	LIG4	100	81.888	Monodelphis_domestica
ENSHGLG00100003265	LIG4	99	64.673	ENSMALG00000008555	lig4	99	64.673	Monopterus_albus
ENSHGLG00100003265	LIG4	100	85.401	MGP_CAROLIEiJ_G0030809	Lig4	100	85.401	Mus_caroli
ENSHGLG00100003265	LIG4	100	85.291	ENSMUSG00000049717	Lig4	100	85.291	Mus_musculus
ENSHGLG00100003265	LIG4	100	84.852	MGP_PahariEiJ_G0021270	Lig4	100	84.852	Mus_pahari
ENSHGLG00100003265	LIG4	100	85.291	MGP_SPRETEiJ_G0031917	Lig4	100	85.291	Mus_spretus
ENSHGLG00100003265	LIG4	100	86.937	ENSMPUG00000018675	LIG4	100	86.937	Mustela_putorius_furo
ENSHGLG00100003265	LIG4	100	88.255	ENSMLUG00000001267	LIG4	100	88.255	Myotis_lucifugus
ENSHGLG00100003265	LIG4	100	86.169	ENSNGAG00000013258	Lig4	100	86.169	Nannospalax_galili
ENSHGLG00100003265	LIG4	99	64.868	ENSNBRG00000021252	lig4	99	64.868	Neolamprologus_brichardi
ENSHGLG00100003265	LIG4	100	89.352	ENSNLEG00000007888	LIG4	100	89.352	Nomascus_leucogenys
ENSHGLG00100003265	LIG4	100	85.840	ENSOPRG00000005765	LIG4	100	85.840	Ochotona_princeps
ENSHGLG00100003265	LIG4	100	91.218	ENSODEG00000019683	LIG4	100	91.218	Octodon_degus
ENSHGLG00100003265	LIG4	99	64.868	ENSONIG00000011969	lig4	98	65.088	Oreochromis_niloticus
ENSHGLG00100003265	LIG4	100	88.694	ENSOCUG00000015734	LIG4	100	88.694	Oryctolagus_cuniculus
ENSHGLG00100003265	LIG4	99	63.736	ENSORLG00000004041	lig4	99	63.956	Oryzias_latipes
ENSHGLG00100003265	LIG4	99	64.176	ENSORLG00020019607	lig4	99	64.396	Oryzias_latipes_hni
ENSHGLG00100003265	LIG4	99	63.846	ENSORLG00015017754	lig4	99	64.066	Oryzias_latipes_hsok
ENSHGLG00100003265	LIG4	74	69.527	ENSOMEG00000003459	lig4	98	69.527	Oryzias_melastigma
ENSHGLG00100003265	LIG4	100	88.377	ENSOGAG00000032120	LIG4	99	88.377	Otolemur_garnettii
ENSHGLG00100003265	LIG4	82	88.322	ENSOARG00000005590	LIG4	98	88.322	Ovis_aries
ENSHGLG00100003265	LIG4	100	89.352	ENSPPAG00000032998	LIG4	100	89.352	Pan_paniscus
ENSHGLG00100003265	LIG4	100	88.035	ENSPPRG00000017804	LIG4	100	88.035	Panthera_pardus
ENSHGLG00100003265	LIG4	100	87.925	ENSPTIG00000010051	LIG4	100	87.925	Panthera_tigris_altaica
ENSHGLG00100003265	LIG4	100	89.462	ENSPTRG00000006025	LIG4	100	89.462	Pan_troglodytes
ENSHGLG00100003265	LIG4	100	89.243	ENSPANG00000007562	LIG4	100	89.243	Papio_anubis
ENSHGLG00100003265	LIG4	99	65.532	ENSPKIG00000011645	lig4	98	65.532	Paramormyrops_kingsleyae
ENSHGLG00100003265	LIG4	99	76.703	ENSPSIG00000001504	LIG4	99	76.703	Pelodiscus_sinensis
ENSHGLG00100003265	LIG4	99	62.889	ENSPMGG00000013486	lig4	99	62.459	Periophthalmus_magnuspinnatus
ENSHGLG00100003265	LIG4	100	85.965	ENSPEMG00000000076	Lig4	100	85.965	Peromyscus_maniculatus_bairdii
ENSHGLG00100003265	LIG4	100	82.785	ENSPCIG00000021882	LIG4	100	82.785	Phascolarctos_cinereus
ENSHGLG00100003265	LIG4	99	64.627	ENSPFOG00000000797	lig4	99	64.286	Poecilia_formosa
ENSHGLG00100003265	LIG4	99	64.627	ENSPLAG00000001196	lig4	99	64.286	Poecilia_latipinna
ENSHGLG00100003265	LIG4	99	64.627	ENSPMEG00000021353	lig4	99	64.396	Poecilia_mexicana
ENSHGLG00100003265	LIG4	99	64.294	ENSPREG00000007323	lig4	99	64.066	Poecilia_reticulata
ENSHGLG00100003265	LIG4	100	89.462	ENSPPYG00000005540	LIG4	100	89.462	Pongo_abelii
ENSHGLG00100003265	LIG4	100	88.145	ENSPVAG00000016403	LIG4	100	88.145	Pteropus_vampyrus
ENSHGLG00100003265	LIG4	99	64.537	ENSPNYG00000009660	lig4	99	64.537	Pundamilia_nyererei
ENSHGLG00100003265	LIG4	99	64.725	ENSPNAG00000028069	LIG4	99	64.725	Pygocentrus_nattereri
ENSHGLG00100003265	LIG4	99	64.725	ENSPNAG00000028056	lig4	99	64.725	Pygocentrus_nattereri
ENSHGLG00100003265	LIG4	100	84.413	ENSRNOG00000014605	Lig4	100	84.413	Rattus_norvegicus
ENSHGLG00100003265	LIG4	100	88.474	ENSRBIG00000039962	LIG4	100	88.474	Rhinopithecus_bieti
ENSHGLG00100003265	LIG4	100	89.682	ENSRROG00000006040	LIG4	100	89.682	Rhinopithecus_roxellana
ENSHGLG00100003265	LIG4	100	88.145	ENSSBOG00000019029	LIG4	100	88.145	Saimiri_boliviensis_boliviensis
ENSHGLG00100003265	LIG4	100	79.034	ENSSHAG00000009525	LIG4	100	79.496	Sarcophilus_harrisii
ENSHGLG00100003265	LIG4	100	65.066	ENSSFOG00015012835	lig4	100	65.066	Scleropages_formosus
ENSHGLG00100003265	LIG4	99	62.126	ENSSMAG00000011267	lig4	99	62.126	Scophthalmus_maximus
ENSHGLG00100003265	LIG4	99	65.188	ENSSDUG00000010343	lig4	98	65.188	Seriola_dumerili
ENSHGLG00100003265	LIG4	99	63.407	ENSSLDG00000003239	lig4	99	63.407	Seriola_lalandi_dorsalis
ENSHGLG00100003265	LIG4	100	82.385	ENSSARG00000006573	LIG4	100	82.385	Sorex_araneus
ENSHGLG00100003265	LIG4	93	76.896	ENSSPUG00000002444	LIG4	100	76.896	Sphenodon_punctatus
ENSHGLG00100003265	LIG4	99	64.505	ENSSPAG00000001609	lig4	99	64.505	Stegastes_partitus
ENSHGLG00100003265	LIG4	100	86.608	ENSSSCG00000009540	LIG4	100	86.608	Sus_scrofa
ENSHGLG00100003265	LIG4	99	74.004	ENSTGUG00000010795	LIG4	99	74.004	Taeniopygia_guttata
ENSHGLG00100003265	LIG4	99	64.505	ENSTRUG00000009984	lig4	99	64.505	Takifugu_rubripes
ENSHGLG00100003265	LIG4	99	65.385	ENSTNIG00000010348	lig4	99	65.604	Tetraodon_nigroviridis
ENSHGLG00100003265	LIG4	100	87.706	ENSTBEG00000017741	LIG4	100	87.706	Tupaia_belangeri
ENSHGLG00100003265	LIG4	100	88.584	ENSTTRG00000012660	LIG4	100	88.584	Tursiops_truncatus
ENSHGLG00100003265	LIG4	100	87.157	ENSUAMG00000003773	LIG4	100	87.157	Ursus_americanus
ENSHGLG00100003265	LIG4	98	71.955	ENSXETG00000002654	lig4	98	71.955	Xenopus_tropicalis
ENSHGLG00100003265	LIG4	99	64.516	ENSXCOG00000017401	lig4	99	64.066	Xiphophorus_couchianus
ENSHGLG00100003265	LIG4	99	64.556	ENSXMAG00000015142	lig4	99	64.105	Xiphophorus_maculatus