EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100003417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 30096 bases
Position: chrJH167401.1:2243757-2273852
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100004522	KH_1	PF00013.29	1.6e-69	1	4
ENSHGLP00100004522	KH_1	PF00013.29	1.6e-69	2	4
ENSHGLP00100004522	KH_1	PF00013.29	1.6e-69	3	4
ENSHGLP00100004522	KH_1	PF00013.29	1.6e-69	4	4
ENSHGLP00100004523	KH_1	PF00013.29	1.7e-69	1	4
ENSHGLP00100004523	KH_1	PF00013.29	1.7e-69	2	4
ENSHGLP00100004523	KH_1	PF00013.29	1.7e-69	3	4
ENSHGLP00100004523	KH_1	PF00013.29	1.7e-69	4	4
ENSHGLP00100004522	KH_2	PF07650.17	1.7e-22	1	2
ENSHGLP00100004522	KH_2	PF07650.17	1.7e-22	2	2
ENSHGLP00100004523	KH_2	PF07650.17	1.9e-22	1	2
ENSHGLP00100004523	KH_2	PF07650.17	1.9e-22	2	2
ENSHGLP00100004522	DUF1897	PF09005.10	8.3e-12	1	2
ENSHGLP00100004522	DUF1897	PF09005.10	8.3e-12	2	2
ENSHGLP00100004523	DUF1897	PF09005.10	8.9e-12	1	2
ENSHGLP00100004523	DUF1897	PF09005.10	8.9e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100004591	-	1944	-	ENSHGLP00100004522	647 (aa)	-	UPI0006573D41
ENSHGLT00100004592	-	1977	-	ENSHGLP00100004523	658 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100003417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100003417	-	53	30.168	ENSHGLG00100015153	NOVA2	94	36.765
ENSHGLG00100003417	-	50	40.625	ENSHGLG00100013590	PCBP3	67	32.653
ENSHGLG00100003417	-	56	34.524	ENSHGLG00100008748	PCBP4	75	34.524
ENSHGLG00100003417	-	79	50.000	ENSHGLG00100000480	KHSRP	66	54.717
ENSHGLG00100003417	-	72	92.473	ENSHGLG00100001414	-	72	92.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003417	-	100	98.784	ENSG00000162613	FUBP1	100	98.784	Homo_sapiens
ENSHGLG00100003417	-	99	70.138	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSHGLG00100003417	-	100	95.522	ENSAMEG00000007372	FUBP1	100	95.522	Ailuropoda_melanoleuca
ENSHGLG00100003417	-	100	69.160	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSHGLG00100003417	-	100	67.534	ENSAPEG00000012232	fubp1	72	77.074	Amphiprion_percula
ENSHGLG00100003417	-	99	71.716	ENSATEG00000018619	fubp1	70	78.194	Anabas_testudineus
ENSHGLG00100003417	-	94	96.865	ENSAPLG00000005965	FUBP1	100	96.865	Anas_platyrhynchos
ENSHGLG00100003417	-	99	85.881	ENSACAG00000006310	FUBP1	96	86.900	Anolis_carolinensis
ENSHGLG00100003417	-	99	71.450	ENSACLG00000006708	fubp1	72	77.753	Astatotilapia_calliptera
ENSHGLG00100003417	-	88	77.180	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSHGLG00100003417	-	100	98.764	ENSCJAG00000007062	FUBP1	100	98.764	Callithrix_jacchus
ENSHGLG00100003417	-	100	98.918	ENSCAFG00000020361	FUBP1	100	98.918	Canis_familiaris
ENSHGLG00100003417	-	94	98.544	ENSTSYG00000000148	FUBP1	100	98.544	Carlito_syrichta
ENSHGLG00100003417	-	58	98.901	ENSCAPG00000011052	-	67	98.901	Cavia_aperea
ENSHGLG00100003417	-	100	99.696	ENSCPOG00000002757	FUBP1	100	99.696	Cavia_porcellus
ENSHGLG00100003417	-	100	84.393	ENSCCAG00000036537	FUBP1	100	84.682	Cebus_capucinus
ENSHGLG00100003417	-	100	98.764	ENSCATG00000042126	FUBP1	100	98.764	Cercocebus_atys
ENSHGLG00100003417	-	100	99.240	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSHGLG00100003417	-	100	98.764	ENSCSAG00000001402	FUBP1	100	98.764	Chlorocebus_sabaeus
ENSHGLG00100003417	-	100	98.936	ENSCHOG00000008177	FUBP1	100	98.936	Choloepus_hoffmanni
ENSHGLG00100003417	-	100	98.632	ENSCGRG00001007103	Fubp1	100	98.632	Cricetulus_griseus_chok1gshd
ENSHGLG00100003417	-	94	99.353	ENSCGRG00000003372	Fubp1	100	99.353	Cricetulus_griseus_crigri
ENSHGLG00100003417	-	100	70.336	ENSCSEG00000021412	fubp1	70	76.522	Cynoglossus_semilaevis
ENSHGLG00100003417	-	99	68.630	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSHGLG00100003417	-	100	69.151	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSHGLG00100003417	-	68	69.136	ENSDNOG00000034565	-	82	69.880	Dasypus_novemcinctus
ENSHGLG00100003417	-	100	98.480	ENSDORG00000016534	Fubp1	100	98.480	Dipodomys_ordii
ENSHGLG00100003417	-	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSHGLG00100003417	-	86	45.862	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSHGLG00100003417	-	90	100.000	ENSEEUG00000001287	FUBP1	100	85.410	Erinaceus_europaeus
ENSHGLG00100003417	-	100	67.421	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSHGLG00100003417	-	99	95.820	ENSFALG00000005768	FUBP1	98	95.525	Ficedula_albicollis
ENSHGLG00100003417	-	100	99.240	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSHGLG00100003417	-	100	71.061	ENSFHEG00000005230	fubp1	70	78.384	Fundulus_heteroclitus
ENSHGLG00100003417	-	100	66.055	ENSGMOG00000003370	fubp1	70	69.518	Gadus_morhua
ENSHGLG00100003417	-	100	96.148	ENSGALG00000008939	FUBP1	100	96.148	Gallus_gallus
ENSHGLG00100003417	-	100	69.104	ENSGAFG00000020972	fubp1	91	77.098	Gambusia_affinis
ENSHGLG00100003417	-	100	70.015	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSHGLG00100003417	-	100	69.912	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSHGLG00100003417	-	72	91.613	ENSHGLG00000002808	-	72	91.447	Heterocephalus_glaber_female
ENSHGLG00100003417	-	100	100.000	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100003417	-	100	67.953	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSHGLG00100003417	-	100	73.828	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSHGLG00100003417	-	100	99.392	ENSSTOG00000014312	FUBP1	100	99.392	Ictidomys_tridecemlineatus
ENSHGLG00100003417	-	100	98.918	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSHGLG00100003417	-	100	70.076	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSHGLG00100003417	-	100	67.064	ENSLBEG00000012700	fubp1	72	75.000	Labrus_bergylta
ENSHGLG00100003417	-	98	71.176	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSHGLG00100003417	-	100	95.582	ENSLAFG00000003273	FUBP1	100	98.018	Loxodonta_africana
ENSHGLG00100003417	-	100	98.632	ENSMFAG00000031825	FUBP1	100	98.632	Macaca_fascicularis
ENSHGLG00100003417	-	100	98.764	ENSMMUG00000002899	FUBP1	100	98.764	Macaca_mulatta
ENSHGLG00100003417	-	100	98.764	ENSMNEG00000045212	FUBP1	100	98.764	Macaca_nemestrina
ENSHGLG00100003417	-	100	71.537	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSHGLG00100003417	-	94	96.388	ENSMGAG00000009424	FUBP1	100	96.388	Meleagris_gallopavo
ENSHGLG00100003417	-	100	98.784	ENSMAUG00000016428	Fubp1	100	98.784	Mesocricetus_auratus
ENSHGLG00100003417	-	100	98.784	ENSMOCG00000014751	Fubp1	100	98.784	Microtus_ochrogaster
ENSHGLG00100003417	-	89	73.646	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSHGLG00100003417	-	96	90.297	ENSMODG00000020804	FUBP1	100	90.297	Monodelphis_domestica
ENSHGLG00100003417	-	100	69.909	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSHGLG00100003417	-	100	98.328	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.328	Mus_caroli
ENSHGLG00100003417	-	100	98.024	ENSMUSG00000028034	Fubp1	100	98.024	Mus_musculus
ENSHGLG00100003417	-	100	98.480	MGP_PahariEiJ_G0027191	Fubp1	100	98.480	Mus_pahari
ENSHGLG00100003417	-	100	98.176	MGP_SPRETEiJ_G0026693	Fubp1	100	98.176	Mus_spretus
ENSHGLG00100003417	-	100	94.933	ENSMLUG00000014802	FUBP1	100	94.933	Myotis_lucifugus
ENSHGLG00100003417	-	100	94.833	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSHGLG00100003417	-	100	69.029	ENSNBRG00000015099	fubp1	72	77.753	Neolamprologus_brichardi
ENSHGLG00100003417	-	100	95.000	ENSNLEG00000009772	FUBP1	100	95.000	Nomascus_leucogenys
ENSHGLG00100003417	-	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSHGLG00100003417	-	91	95.302	ENSOPRG00000001175	FUBP1	91	95.302	Ochotona_princeps
ENSHGLG00100003417	-	99	66.977	ENSODEG00000003657	-	99	66.202	Octodon_degus
ENSHGLG00100003417	-	100	99.392	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSHGLG00100003417	-	99	69.822	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSHGLG00100003417	-	89	91.954	ENSOANG00000009777	FUBP1	99	91.790	Ornithorhynchus_anatinus
ENSHGLG00100003417	-	99	69.350	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSHGLG00100003417	-	100	68.336	ENSORLG00020005908	fubp1	70	77.313	Oryzias_latipes_hni
ENSHGLG00100003417	-	99	70.743	ENSORLG00015008779	fubp1	70	77.313	Oryzias_latipes_hsok
ENSHGLG00100003417	-	100	70.216	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSHGLG00100003417	-	100	95.238	ENSOGAG00000014233	FUBP1	100	95.238	Otolemur_garnettii
ENSHGLG00100003417	-	100	95.652	ENSOARG00000013259	FUBP1	100	95.502	Ovis_aries
ENSHGLG00100003417	-	100	98.936	ENSPPRG00000000413	FUBP1	100	98.936	Panthera_pardus
ENSHGLG00100003417	-	100	98.936	ENSPTIG00000019450	FUBP1	100	98.936	Panthera_tigris_altaica
ENSHGLG00100003417	-	92	96.141	ENSPSIG00000012965	FUBP1	100	96.141	Pelodiscus_sinensis
ENSHGLG00100003417	-	99	71.121	ENSPMGG00000009060	fubp1	71	76.522	Periophthalmus_magnuspinnatus
ENSHGLG00100003417	-	100	98.328	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSHGLG00100003417	-	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSHGLG00100003417	-	100	68.043	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSHGLG00100003417	-	99	72.377	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSHGLG00100003417	-	99	70.624	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSHGLG00100003417	-	71	99.351	ENSPPYG00000001219	-	70	99.351	Pongo_abelii
ENSHGLG00100003417	-	100	98.632	ENSPCAG00000012617	FUBP1	100	98.632	Procavia_capensis
ENSHGLG00100003417	-	100	98.936	ENSPCOG00000024974	FUBP1	100	98.936	Propithecus_coquereli
ENSHGLG00100003417	-	100	94.529	ENSPVAG00000014637	FUBP1	100	94.529	Pteropus_vampyrus
ENSHGLG00100003417	-	100	71.537	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSHGLG00100003417	-	100	70.949	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSHGLG00100003417	-	100	98.609	ENSRNOG00000043370	Fubp1	100	98.609	Rattus_norvegicus
ENSHGLG00100003417	-	100	98.764	ENSRBIG00000042950	FUBP1	100	98.764	Rhinopithecus_bieti
ENSHGLG00100003417	-	100	98.764	ENSRROG00000043534	FUBP1	100	98.764	Rhinopithecus_roxellana
ENSHGLG00100003417	-	100	98.918	ENSSBOG00000027299	FUBP1	100	98.918	Saimiri_boliviensis_boliviensis
ENSHGLG00100003417	-	94	97.049	ENSSHAG00000005367	FUBP1	100	97.842	Sarcophilus_harrisii
ENSHGLG00100003417	-	100	72.552	ENSSFOG00015010213	fubp1	70	79.386	Scleropages_formosus
ENSHGLG00100003417	-	100	68.596	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSHGLG00100003417	-	100	69.552	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSHGLG00100003417	-	100	97.133	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSHGLG00100003417	-	99	88.271	ENSSPUG00000008389	FUBP1	100	85.756	Sphenodon_punctatus
ENSHGLG00100003417	-	99	71.803	ENSSPAG00000010161	fubp1	69	77.533	Stegastes_partitus
ENSHGLG00100003417	-	94	95.752	ENSTGUG00000006841	FUBP1	100	95.752	Taeniopygia_guttata
ENSHGLG00100003417	-	93	71.782	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSHGLG00100003417	-	50	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSHGLG00100003417	-	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSHGLG00100003417	-	100	98.784	ENSTTRG00000000096	FUBP1	100	98.784	Tursiops_truncatus
ENSHGLG00100003417	-	99	98.775	ENSVPAG00000004709	FUBP1	100	98.775	Vicugna_pacos
ENSHGLG00100003417	-	100	68.349	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSHGLG00100003417	-	97	71.339	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus