EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100003589 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 18767 bases
Position: chrJH169785.1:637328-656094
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100004741	CSD	PF00313.22	3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100004812	YBX3-201	753	-	ENSHGLP00100004741	250 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100003589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100003589	YBX3	87	50.607	ENSHGLG00100015192	-	66	49.746
ENSHGLG00100003589	YBX3	86	51.119	ENSHGLG00100013939	-	51	71.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003589	YBX3	87	88.532	ENSG00000060138	YBX3	82	100.000	Homo_sapiens
ENSHGLG00100003589	YBX3	87	65.035	ENSAMEG00000009393	YBX3	57	97.727	Ailuropoda_melanoleuca
ENSHGLG00100003589	YBX3	86	58.304	ENSAPLG00000003147	YBX3	100	58.304	Anas_platyrhynchos
ENSHGLG00100003589	YBX3	87	65.333	ENSANAG00000033366	-	68	60.513	Aotus_nancymaae
ENSHGLG00100003589	YBX3	87	88.991	ENSANAG00000024492	-	72	88.991	Aotus_nancymaae
ENSHGLG00100003589	YBX3	87	63.986	ENSBTAG00000009663	YBX3	63	91.071	Bos_taurus
ENSHGLG00100003589	YBX3	87	88.991	ENSCJAG00000021660	-	72	88.991	Callithrix_jacchus
ENSHGLG00100003589	YBX3	87	90.826	ENSCAFG00000013401	YBX3	100	94.037	Canis_familiaris
ENSHGLG00100003589	YBX3	87	85.780	ENSCAFG00020006412	YBX3	71	88.991	Canis_lupus_dingo
ENSHGLG00100003589	YBX3	87	63.889	ENSCHIG00000010863	YBX3	56	97.727	Capra_hircus
ENSHGLG00100003589	YBX3	87	81.279	ENSTSYG00000035821	-	73	76.606	Carlito_syrichta
ENSHGLG00100003589	YBX3	90	89.823	ENSTSYG00000004204	-	88	89.823	Carlito_syrichta
ENSHGLG00100003589	YBX3	91	70.370	ENSCAPG00000015039	YBX3	68	97.959	Cavia_aperea
ENSHGLG00100003589	YBX3	87	96.330	ENSCPOG00000011329	YBX3	80	96.330	Cavia_porcellus
ENSHGLG00100003589	YBX3	87	88.991	ENSCCAG00000016469	YBX3	72	88.991	Cebus_capucinus
ENSHGLG00100003589	YBX3	87	87.615	ENSCATG00000034411	YBX3	72	87.615	Cercocebus_atys
ENSHGLG00100003589	YBX3	92	67.114	ENSCLAG00000016030	YBX3	69	98.214	Chinchilla_lanigera
ENSHGLG00100003589	YBX3	87	63.415	ENSCSAG00000008744	YBX3	54	97.727	Chlorocebus_sabaeus
ENSHGLG00100003589	YBX3	85	84.977	ENSCPBG00000014147	YBX3	74	84.977	Chrysemys_picta_bellii
ENSHGLG00100003589	YBX3	66	56.805	ENSCING00000010654	yb1/2/3	63	54.913	Ciona_intestinalis
ENSHGLG00100003589	YBX3	87	88.532	ENSCANG00000036801	YBX3	89	88.532	Colobus_angolensis_palliatus
ENSHGLG00100003589	YBX3	87	92.202	ENSCGRG00001016148	Ybx3	74	92.202	Cricetulus_griseus_chok1gshd
ENSHGLG00100003589	YBX3	89	62.838	ENSCGRG00000004563	Ybx3	82	87.500	Cricetulus_griseus_crigri
ENSHGLG00100003589	YBX3	86	67.018	ENSDORG00000009103	Ybx3	58	95.833	Dipodomys_ordii
ENSHGLG00100003589	YBX3	86	58.188	ENSETEG00000002557	YBX3	53	100.000	Echinops_telfairi
ENSHGLG00100003589	YBX3	87	85.780	ENSEASG00005014726	YBX3	71	84.404	Equus_asinus_asinus
ENSHGLG00100003589	YBX3	87	86.697	ENSECAG00000013777	YBX3	72	89.908	Equus_caballus
ENSHGLG00100003589	YBX3	86	63.732	ENSEEUG00000010415	YBX3	69	100.000	Erinaceus_europaeus
ENSHGLG00100003589	YBX3	87	89.450	ENSFCAG00000027748	YBX3	72	89.450	Felis_catus
ENSHGLG00100003589	YBX3	92	64.883	ENSFDAG00000021192	YBX3	66	97.917	Fukomys_damarensis
ENSHGLG00100003589	YBX3	87	83.105	ENSGALG00000031890	YBX3	74	83.105	Gallus_gallus
ENSHGLG00100003589	YBX3	87	79.358	ENSGAGG00000017780	YBX3	75	83.486	Gopherus_agassizii
ENSHGLG00100003589	YBX3	87	88.532	ENSGGOG00000001352	YBX3	72	88.532	Gorilla_gorilla
ENSHGLG00100003589	YBX3	79	84.236	ENSHGLG00000015495	-	73	73.077	Heterocephalus_glaber_female
ENSHGLG00100003589	YBX3	90	61.268	ENSSTOG00000002108	-	53	95.833	Ictidomys_tridecemlineatus
ENSHGLG00100003589	YBX3	87	65.217	ENSSTOG00000032577	-	59	97.727	Ictidomys_tridecemlineatus
ENSHGLG00100003589	YBX3	87	66.972	ENSJJAG00000014239	Ybx3	83	61.194	Jaculus_jaculus
ENSHGLG00100003589	YBX3	87	65.157	ENSLAFG00000017247	YBX3	67	88.393	Loxodonta_africana
ENSHGLG00100003589	YBX3	87	88.073	ENSMFAG00000039369	YBX3	72	88.073	Macaca_fascicularis
ENSHGLG00100003589	YBX3	87	63.415	ENSMMUG00000022469	YBX3	62	97.727	Macaca_mulatta
ENSHGLG00100003589	YBX3	87	88.073	ENSMNEG00000045109	YBX3	72	88.073	Macaca_nemestrina
ENSHGLG00100003589	YBX3	93	85.345	ENSMLEG00000033618	YBX3	81	90.086	Mandrillus_leucophaeus
ENSHGLG00100003589	YBX3	84	98.077	ENSMGAG00000014224	YBX3	99	83.410	Meleagris_gallopavo
ENSHGLG00100003589	YBX3	87	92.202	ENSMAUG00000012185	Ybx3	86	92.202	Mesocricetus_auratus
ENSHGLG00100003589	YBX3	87	78.440	ENSMICG00000031459	-	76	76.606	Microcebus_murinus
ENSHGLG00100003589	YBX3	87	64.111	ENSMICG00000038002	-	54	97.727	Microcebus_murinus
ENSHGLG00100003589	YBX3	87	91.743	ENSMOCG00000016291	Ybx3	91	91.743	Microtus_ochrogaster
ENSHGLG00100003589	YBX3	94	61.794	ENSMODG00000018248	YBX3	61	87.500	Monodelphis_domestica
ENSHGLG00100003589	YBX3	87	91.284	MGP_CAROLIEiJ_G0028947	Ybx3	74	91.284	Mus_caroli
ENSHGLG00100003589	YBX3	87	90.826	ENSMUSG00000030189	Ybx3	74	90.826	Mus_musculus
ENSHGLG00100003589	YBX3	87	91.743	MGP_PahariEiJ_G0022709	Ybx3	74	91.743	Mus_pahari
ENSHGLG00100003589	YBX3	87	91.284	MGP_SPRETEiJ_G0029994	Ybx3	74	91.284	Mus_spretus
ENSHGLG00100003589	YBX3	86	83.929	ENSMPUG00000011810	YBX3	51	83.929	Mustela_putorius_furo
ENSHGLG00100003589	YBX3	78	63.941	ENSMLUG00000007476	YBX3	80	90.909	Myotis_lucifugus
ENSHGLG00100003589	YBX3	86	85.185	ENSNGAG00000000710	Ybx3	88	85.185	Nannospalax_galili
ENSHGLG00100003589	YBX3	87	86.301	ENSNLEG00000034844	YBX3	77	83.028	Nomascus_leucogenys
ENSHGLG00100003589	YBX3	87	60.279	ENSODEG00000017957	YBX3	53	94.737	Octodon_degus
ENSHGLG00100003589	YBX3	81	61.029	ENSOCUG00000001889	YBX3	66	90.179	Oryctolagus_cuniculus
ENSHGLG00100003589	YBX3	84	97.000	ENSOGAG00000013245	YBX3	62	90.164	Otolemur_garnettii
ENSHGLG00100003589	YBX3	80	97.727	ENSOARG00000020919	YBX3	67	97.727	Ovis_aries
ENSHGLG00100003589	YBX3	87	88.532	ENSPPAG00000039068	YBX3	75	88.532	Pan_paniscus
ENSHGLG00100003589	YBX3	87	89.908	ENSPPRG00000005859	YBX3	72	89.908	Panthera_pardus
ENSHGLG00100003589	YBX3	86	64.789	ENSPTIG00000005322	YBX3	60	94.000	Panthera_tigris_altaica
ENSHGLG00100003589	YBX3	87	88.532	ENSPTRG00000004681	YBX3	71	88.532	Pan_troglodytes
ENSHGLG00100003589	YBX3	87	87.615	ENSPANG00000010280	YBX3	72	87.615	Papio_anubis
ENSHGLG00100003589	YBX3	86	85.185	ENSPSIG00000009247	YBX3	100	85.714	Pelodiscus_sinensis
ENSHGLG00100003589	YBX3	87	91.743	ENSPEMG00000012132	-	87	91.743	Peromyscus_maniculatus_bairdii
ENSHGLG00100003589	YBX3	87	91.743	ENSPEMG00000010391	-	82	91.743	Peromyscus_maniculatus_bairdii
ENSHGLG00100003589	YBX3	76	60.784	ENSPCIG00000029949	YBX3	64	98.592	Phascolarctos_cinereus
ENSHGLG00100003589	YBX3	87	63.415	ENSPPYG00000004279	YBX3	54	97.727	Pongo_abelii
ENSHGLG00100003589	YBX3	87	92.202	ENSRNOG00000005480	Ybx3	74	92.202	Rattus_norvegicus
ENSHGLG00100003589	YBX3	87	88.532	ENSRBIG00000039208	YBX3	72	88.532	Rhinopithecus_bieti
ENSHGLG00100003589	YBX3	87	88.532	ENSRROG00000029638	YBX3	72	88.532	Rhinopithecus_roxellana
ENSHGLG00100003589	YBX3	97	81.070	ENSSBOG00000030573	YBX3	81	85.597	Saimiri_boliviensis_boliviensis
ENSHGLG00100003589	YBX3	79	98.837	ENSSHAG00000003262	YBX3	66	98.837	Sarcophilus_harrisii
ENSHGLG00100003589	YBX3	56	88.489	ENSSPUG00000009911	-	62	87.879	Sphenodon_punctatus
ENSHGLG00100003589	YBX3	87	90.367	ENSSSCG00000000633	YBX3	70	90.367	Sus_scrofa
ENSHGLG00100003589	YBX3	85	98.095	ENSTGUG00000012047	YBX3	75	98.095	Taeniopygia_guttata
ENSHGLG00100003589	YBX3	87	64.808	ENSTBEG00000012570	YBX3	55	96.591	Tupaia_belangeri
ENSHGLG00100003589	YBX3	78	59.551	ENSTTRG00000008045	YBX3	71	100.000	Tursiops_truncatus
ENSHGLG00100003589	YBX3	84	63.899	ENSUAMG00000016662	YBX3	81	91.071	Ursus_americanus
ENSHGLG00100003589	YBX3	86	65.141	ENSUMAG00000016118	YBX3	69	96.875	Ursus_maritimus
ENSHGLG00100003589	YBX3	70	100.000	ENSVPAG00000000876	YBX3	62	100.000	Vicugna_pacos
ENSHGLG00100003589	YBX3	84	62.816	ENSVVUG00000004956	YBX3	80	89.286	Vulpes_vulpes
ENSHGLG00100003589	YBX3	87	73.182	ENSXETG00000016239	ybx3	67	72.619	Xenopus_tropicalis