EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHGLG00100003696 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Heterocephalus_glaber_male
Status
putative
Strand
Minus strand
Length
207769 bases
Position
chrJH172609.1:628867-836635
Accession
101714200
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60110
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60210
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60310
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60410
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60510
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60610
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60710
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60810
ENSHGLP00100004879zf-C2H2PF00096.261.4e-60910
ENSHGLP00100004879zf-C2H2PF00096.261.4e-601010
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50110
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50210
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50310
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50410
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50510
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50610
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50710
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50810
ENSHGLP00100004880zf-C2H2PF00096.262.6e-50910
ENSHGLP00100004880zf-C2H2PF00096.262.6e-501010
ENSHGLP00100004882zf-C2H2PF00096.262.7e-4316
ENSHGLP00100004882zf-C2H2PF00096.262.7e-4326
ENSHGLP00100004882zf-C2H2PF00096.262.7e-4336
ENSHGLP00100004882zf-C2H2PF00096.262.7e-4346
ENSHGLP00100004882zf-C2H2PF00096.262.7e-4356
ENSHGLP00100004882zf-C2H2PF00096.262.7e-4366
ENSHGLP00100004881zf-C2H2PF00096.265.1e-2715
ENSHGLP00100004881zf-C2H2PF00096.265.1e-2725
ENSHGLP00100004881zf-C2H2PF00096.265.1e-2735
ENSHGLP00100004881zf-C2H2PF00096.265.1e-2745
ENSHGLP00100004881zf-C2H2PF00096.265.1e-2755
ENSHGLP00100004882zf-metPF12874.72.4e-2013
ENSHGLP00100004882zf-metPF12874.72.4e-2023
ENSHGLP00100004882zf-metPF12874.72.4e-2033
ENSHGLP00100004879zf-metPF12874.72.6e-1913
ENSHGLP00100004879zf-metPF12874.72.6e-1923
ENSHGLP00100004879zf-metPF12874.72.6e-1933
ENSHGLP00100004880zf-metPF12874.71.2e-1613
ENSHGLP00100004880zf-metPF12874.71.2e-1623
ENSHGLP00100004880zf-metPF12874.71.2e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHGLT00100004951PRDM5-2011800-ENSHGLP00100004879599 (aa)XP_004854978UPI00034F7ED1
ENSHGLT00100004952PRDM5-2021248-ENSHGLP00100004880415 (aa)--
ENSHGLT00100004953PRDM5-203666-ENSHGLP00100004881221 (aa)--
ENSHGLT00100004954PRDM5-2041506-ENSHGLP00100004882501 (aa)--
Gene Model
Click here to download ENSHGLG00100003696's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003696's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHGLG00100003696PRDM57332.773ENSHGLG00100011050ZNF5267930.800
ENSHGLG00100003696PRDM58040.411ENSHGLG00100018809ZNF27740.411
ENSHGLG00100003696PRDM57343.165ENSHGLG00100007775ZNF7685343.307
ENSHGLG00100003696PRDM57433.951ENSHGLG00100017872-7733.951
ENSHGLG00100003696PRDM57543.220ENSHGLG00100012634WT15441.284
ENSHGLG00100003696PRDM56948.855ENSHGLG00100011420-6348.855
ENSHGLG00100003696PRDM57140.714ENSHGLG00100011990ZNF3198840.278
ENSHGLG00100003696PRDM57639.130ENSHGLG00100007619ZNF5826839.130
ENSHGLG00100003696PRDM58440.373ENSHGLG00100016493-8340.373
ENSHGLG00100003696PRDM58746.465ENSHGLG00100005328-8739.735
ENSHGLG00100003696PRDM56744.231ENSHGLG00100006773ZNF5748630.556
ENSHGLG00100003696PRDM59836.264ENSHGLG00100002350PRDM105035.052
ENSHGLG00100003696PRDM57836.441ENSHGLG00100004473ZFP649132.599
ENSHGLG00100003696PRDM58437.500ENSHGLG00100019290-8241.196
ENSHGLG00100003696PRDM57538.843ENSHGLG00100008506ZNF8657838.843
ENSHGLG00100003696PRDM58530.625ENSHGLG00100015342-5030.625
ENSHGLG00100003696PRDM57332.759ENSHGLG00100011561GTF3A9532.766
ENSHGLG00100003696PRDM57146.377ENSHGLG00100012284-10039.286
ENSHGLG00100003696PRDM56942.157ENSHGLG00100007484SNAI26040.146
ENSHGLG00100003696PRDM57145.349ENSHGLG00100000584ZNF817539.032
ENSHGLG00100003696PRDM56845.455ENSHGLG00100006343ZNF6286343.478
ENSHGLG00100003696PRDM57537.736ENSHGLG00100019441ZNF4239238.947
ENSHGLG00100003696PRDM57251.408ENSHGLG00100015134-8939.375
ENSHGLG00100003696PRDM57741.009ENSHGLG00100007588ZNF2268047.312
ENSHGLG00100003696PRDM57639.655ENSHGLG00100007337ZNF7847436.207
ENSHGLG00100003696PRDM57544.118ENSHGLG00100018390SNAI15844.118
ENSHGLG00100003696PRDM57447.000ENSHGLG00100010077ZNF2357447.000
ENSHGLG00100003696PRDM58646.739ENSHGLG00100004852ZNF2366747.273
ENSHGLG00100003696PRDM57046.043ENSHGLG00100009889-7839.867
ENSHGLG00100003696PRDM58441.877ENSHGLG00100007268-8647.887
ENSHGLG00100003696PRDM57250.000ENSHGLG00100002722SALL45650.000
ENSHGLG00100003696PRDM56848.315ENSHGLG00100004688-6648.315
ENSHGLG00100003696PRDM57447.253ENSHGLG00100008287ZNF6677847.253
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHGLG00100003696PRDM510098.734ENSG00000138738PRDM510098.734Homo_sapiens
ENSHGLG00100003696PRDM510088.667ENSAPOG00000023220prdm510088.667Acanthochromis_polyacanthus
ENSHGLG00100003696PRDM58791.195ENSAMEG00000003050PRDM510091.195Ailuropoda_melanoleuca
ENSHGLG00100003696PRDM510088.667ENSACIG00000000406prdm510088.667Amphilophus_citrinellus
ENSHGLG00100003696PRDM510088.667ENSAOCG00000014806prdm510088.667Amphiprion_ocellaris
ENSHGLG00100003696PRDM59678.351ENSAPEG00000016846prdm59978.557Amphiprion_percula
ENSHGLG00100003696PRDM510088.667ENSATEG00000013829prdm510088.667Anabas_testudineus
ENSHGLG00100003696PRDM59389.873ENSAPLG00000013828PRDM510089.873Anas_platyrhynchos
ENSHGLG00100003696PRDM510089.873ENSACAG00000012999PRDM510089.873Anolis_carolinensis
ENSHGLG00100003696PRDM510099.548ENSANAG00000027411PRDM510099.548Aotus_nancymaae
ENSHGLG00100003696PRDM510088.667ENSACLG00000017996prdm510088.667Astatotilapia_calliptera
ENSHGLG00100003696PRDM58187.975ENSAMXG00000041864prdm59975.047Astyanax_mexicanus
ENSHGLG00100003696PRDM510097.785ENSBTAG00000012111PRDM510097.785Bos_taurus
ENSHGLG00100003696PRDM510099.095ENSCJAG00000003133PRDM510099.095Callithrix_jacchus
ENSHGLG00100003696PRDM58797.990ENSCAFG00000004179PRDM59697.990Canis_familiaris
ENSHGLG00100003696PRDM510098.418ENSCAFG00020017685PRDM510098.418Canis_lupus_dingo
ENSHGLG00100003696PRDM510097.468ENSCHIG00000018772PRDM510097.468Capra_hircus
ENSHGLG00100003696PRDM59495.136ENSTSYG00000009630PRDM59597.328Carlito_syrichta
ENSHGLG00100003696PRDM59890.252ENSCAPG00000015217PRDM5100100.000Cavia_aperea
ENSHGLG00100003696PRDM59598.734ENSCPOG00000012883PRDM5100100.000Cavia_porcellus
ENSHGLG00100003696PRDM510099.548ENSCCAG00000023157PRDM510099.548Cebus_capucinus
ENSHGLG00100003696PRDM510099.548ENSCATG00000042510PRDM510099.548Cercocebus_atys
ENSHGLG00100003696PRDM59599.051ENSCLAG00000005392PRDM5100100.000Chinchilla_lanigera
ENSHGLG00100003696PRDM510098.667ENSCSAG00000003729PRDM510098.734Chlorocebus_sabaeus
ENSHGLG00100003696PRDM59998.000ENSCHOG00000007801PRDM58998.000Choloepus_hoffmanni
ENSHGLG00100003696PRDM510090.190ENSCPBG00000024735PRDM510090.190Chrysemys_picta_bellii
ENSHGLG00100003696PRDM510099.548ENSCANG00000036807PRDM510099.548Colobus_angolensis_palliatus
ENSHGLG00100003696PRDM510098.072ENSCGRG00001010581Prdm510098.072Cricetulus_griseus_chok1gshd
ENSHGLG00100003696PRDM58896.667ENSCGRG00000010996-9997.786Cricetulus_griseus_crigri
ENSHGLG00100003696PRDM510088.000ENSCSEG00000019979prdm510088.000Cynoglossus_semilaevis
ENSHGLG00100003696PRDM510088.667ENSCVAG00000013692prdm510088.667Cyprinodon_variegatus
ENSHGLG00100003696PRDM59890.411ENSDARG00000006288prdm59988.141Danio_rerio
ENSHGLG00100003696PRDM58797.476ENSDNOG00000002009PRDM510097.476Dasypus_novemcinctus
ENSHGLG00100003696PRDM510097.468ENSDORG00000007739Prdm510097.468Dipodomys_ordii
ENSHGLG00100003696PRDM58898.291ENSETEG00000020268PRDM59086.614Echinops_telfairi
ENSHGLG00100003696PRDM59989.262ENSEBUG00000004301prdm510089.262Eptatretus_burgeri
ENSHGLG00100003696PRDM510098.795ENSEASG00005018365PRDM510098.795Equus_asinus_asinus
ENSHGLG00100003696PRDM59997.391ENSECAG00000011516PRDM59097.391Equus_caballus
ENSHGLG00100003696PRDM510087.019ENSECAG00000024747-10087.019Equus_caballus
ENSHGLG00100003696PRDM59996.183ENSEEUG00000010306PRDM510096.183Erinaceus_europaeus
ENSHGLG00100003696PRDM59891.803ENSELUG00000005894prdm59388.987Esox_lucius
ENSHGLG00100003696PRDM510098.101ENSFCAG00000025656PRDM510098.101Felis_catus
ENSHGLG00100003696PRDM59773.209ENSFALG00000008381PRDM510073.209Ficedula_albicollis
ENSHGLG00100003696PRDM510099.548ENSFDAG00000021361PRDM510099.548Fukomys_damarensis
ENSHGLG00100003696PRDM59890.411ENSFHEG00000013040prdm59990.411Fundulus_heteroclitus
ENSHGLG00100003696PRDM59091.176ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSHGLG00100003696PRDM510089.557ENSGALG00000011963PRDM510089.557Gallus_gallus
ENSHGLG00100003696PRDM59891.803ENSGAFG00000019233prdm59588.987Gambusia_affinis
ENSHGLG00100003696PRDM59990.909ENSGAGG00000020362PRDM59991.803Gopherus_agassizii
ENSHGLG00100003696PRDM510099.548ENSGGOG00000013562PRDM510099.548Gorilla_gorilla
ENSHGLG00100003696PRDM510088.667ENSHBUG00000023375prdm510088.667Haplochromis_burtoni
ENSHGLG00100003696PRDM596100.000ENSHGLG00000003010PRDM599100.000Heterocephalus_glaber_female
ENSHGLG00100003696PRDM510088.608ENSHCOG00000012131prdm59988.889Hippocampus_comes
ENSHGLG00100003696PRDM59892.708ENSIPUG00000001248prdm510088.667Ictalurus_punctatus
ENSHGLG00100003696PRDM59594.304ENSSTOG00000004741PRDM510096.842Ictidomys_tridecemlineatus
ENSHGLG00100003696PRDM59598.418ENSJJAG00000011464Prdm510098.667Jaculus_jaculus
ENSHGLG00100003696PRDM510088.000ENSKMAG00000013663prdm510088.000Kryptolebias_marmoratus
ENSHGLG00100003696PRDM510088.667ENSLBEG00000022736prdm510088.667Labrus_bergylta
ENSHGLG00100003696PRDM58790.190ENSLACG00000009187PRDM59990.190Latimeria_chalumnae
ENSHGLG00100003696PRDM59989.262ENSLOCG00000009778prdm59989.262Lepisosteus_oculatus
ENSHGLG00100003696PRDM510097.333ENSLAFG00000006532PRDM510098.101Loxodonta_africana
ENSHGLG00100003696PRDM510099.548ENSMFAG00000045845PRDM510099.548Macaca_fascicularis
ENSHGLG00100003696PRDM510099.548ENSMMUG00000003249PRDM510099.548Macaca_mulatta
ENSHGLG00100003696PRDM510099.548ENSMNEG00000019018PRDM510099.548Macaca_nemestrina
ENSHGLG00100003696PRDM59398.734ENSMLEG00000023145PRDM510098.734Mandrillus_leucophaeus
ENSHGLG00100003696PRDM510088.291ENSMAMG00000013419prdm510088.291Mastacembelus_armatus
ENSHGLG00100003696PRDM510088.667ENSMZEG00005020645prdm510088.667Maylandia_zebra
ENSHGLG00100003696PRDM59389.557ENSMGAG00000010710PRDM510089.557Meleagris_gallopavo
ENSHGLG00100003696PRDM510097.831ENSMAUG00000006768Prdm510097.831Mesocricetus_auratus
ENSHGLG00100003696PRDM510099.333ENSMICG00000001459PRDM510099.333Microcebus_murinus
ENSHGLG00100003696PRDM510098.072ENSMOCG00000016267Prdm510098.072Microtus_ochrogaster
ENSHGLG00100003696PRDM510088.667ENSMMOG00000006035prdm510088.667Mola_mola
ENSHGLG00100003696PRDM510088.667ENSMODG00000018942PRDM510088.924Monodelphis_domestica
ENSHGLG00100003696PRDM510088.667ENSMALG00000013934prdm510088.667Monopterus_albus
ENSHGLG00100003696PRDM510098.313MGP_CAROLIEiJ_G0028463Prdm510098.313Mus_caroli
ENSHGLG00100003696PRDM510098.072ENSMUSG00000029913Prdm510098.072Mus_musculus
ENSHGLG00100003696PRDM510098.313MGP_PahariEiJ_G0022203Prdm510098.313Mus_pahari
ENSHGLG00100003696PRDM510098.072MGP_SPRETEiJ_G0029467Prdm510098.072Mus_spretus
ENSHGLG00100003696PRDM510097.785ENSMPUG00000017415PRDM510097.785Mustela_putorius_furo
ENSHGLG00100003696PRDM58790.000ENSMLUG00000006097PRDM510090.000Myotis_lucifugus
ENSHGLG00100003696PRDM510097.785ENSNGAG00000018317Prdm510097.785Nannospalax_galili
ENSHGLG00100003696PRDM59678.099ENSNBRG00000004976prdm510080.818Neolamprologus_brichardi
ENSHGLG00100003696PRDM510099.548ENSNLEG00000009107PRDM510099.548Nomascus_leucogenys
ENSHGLG00100003696PRDM59089.831ENSMEUG00000006576-7190.678Notamacropus_eugenii
ENSHGLG00100003696PRDM59595.437ENSOPRG00000011066-60100.000Ochotona_princeps
ENSHGLG00100003696PRDM59999.367ENSODEG00000009133PRDM510099.367Octodon_degus
ENSHGLG00100003696PRDM510088.667ENSONIG00000003111prdm59988.291Oreochromis_niloticus
ENSHGLG00100003696PRDM57586.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSHGLG00100003696PRDM59990.955ENSOANG00000015109PRDM59790.955Ornithorhynchus_anatinus
ENSHGLG00100003696PRDM58888.110ENSOCUG00000013454PRDM59988.323Oryctolagus_cuniculus
ENSHGLG00100003696PRDM510088.667ENSORLG00000016247prdm510088.667Oryzias_latipes
ENSHGLG00100003696PRDM510088.667ENSORLG00020018051prdm510088.667Oryzias_latipes_hni
ENSHGLG00100003696PRDM510088.667ENSORLG00015013760prdm510088.667Oryzias_latipes_hsok
ENSHGLG00100003696PRDM510088.667ENSOMEG00000005143prdm510088.667Oryzias_melastigma
ENSHGLG00100003696PRDM57699.333ENSOGAG00000009996PRDM59399.333Otolemur_garnettii
ENSHGLG00100003696PRDM59196.992ENSOARG00000015473PRDM510097.980Ovis_aries
ENSHGLG00100003696PRDM59398.734ENSPPAG00000043045PRDM510098.734Pan_paniscus
ENSHGLG00100003696PRDM510098.101ENSPPRG00000001020PRDM510098.101Panthera_pardus
ENSHGLG00100003696PRDM59398.101ENSPTIG00000010807PRDM59598.101Panthera_tigris_altaica
ENSHGLG00100003696PRDM510099.548ENSPTRG00000016403PRDM510099.548Pan_troglodytes
ENSHGLG00100003696PRDM510099.548ENSPANG00000023612PRDM510099.548Papio_anubis
ENSHGLG00100003696PRDM510087.288ENSPKIG00000015492prdm510087.288Paramormyrops_kingsleyae
ENSHGLG00100003696PRDM510090.190ENSPSIG00000013505PRDM510090.190Pelodiscus_sinensis
ENSHGLG00100003696PRDM510088.000ENSPMGG00000012622prdm510088.000Periophthalmus_magnuspinnatus
ENSHGLG00100003696PRDM56790.722ENSPMAG00000005248prdm510090.722Petromyzon_marinus
ENSHGLG00100003696PRDM59875.936ENSPFOG00000018630prdm59976.471Poecilia_formosa
ENSHGLG00100003696PRDM510088.667ENSPLAG00000014148prdm510088.291Poecilia_latipinna
ENSHGLG00100003696PRDM510088.667ENSPMEG00000018002prdm510088.667Poecilia_mexicana
ENSHGLG00100003696PRDM510088.667ENSPREG00000018366prdm510088.667Poecilia_reticulata
ENSHGLG00100003696PRDM510098.734ENSPPYG00000015031PRDM510098.734Pongo_abelii
ENSHGLG00100003696PRDM58897.333ENSPCAG00000011671PRDM59697.333Procavia_capensis
ENSHGLG00100003696PRDM510099.548ENSPCOG00000022828PRDM510099.548Propithecus_coquereli
ENSHGLG00100003696PRDM59393.987ENSPVAG00000012309PRDM510093.987Pteropus_vampyrus
ENSHGLG00100003696PRDM510088.667ENSPNYG00000012194prdm510088.667Pundamilia_nyererei
ENSHGLG00100003696PRDM58984.295ENSPNAG00000023191-9786.301Pygocentrus_nattereri
ENSHGLG00100003696PRDM59890.411ENSPNAG00000026181prdm59989.103Pygocentrus_nattereri
ENSHGLG00100003696PRDM59992.580ENSRNOG00000023679Prdm59992.580Rattus_norvegicus
ENSHGLG00100003696PRDM510099.548ENSRBIG00000041307PRDM510099.548Rhinopithecus_bieti
ENSHGLG00100003696PRDM58893.210ENSRROG00000035343PRDM59693.210Rhinopithecus_roxellana
ENSHGLG00100003696PRDM510099.095ENSSBOG00000022100PRDM510099.095Saimiri_boliviensis_boliviensis
ENSHGLG00100003696PRDM58590.164ENSSHAG00000003250PRDM510089.427Sarcophilus_harrisii
ENSHGLG00100003696PRDM510089.333ENSSFOG00015020478prdm510089.333Scleropages_formosus
ENSHGLG00100003696PRDM510088.667ENSSMAG00000018844prdm510088.667Scophthalmus_maximus
ENSHGLG00100003696PRDM59991.803ENSSDUG00000020397prdm510088.667Seriola_dumerili
ENSHGLG00100003696PRDM59992.784ENSSLDG00000013353prdm510088.667Seriola_lalandi_dorsalis
ENSHGLG00100003696PRDM593100.000ENSSARG00000014129-6897.436Sorex_araneus
ENSHGLG00100003696PRDM510090.950ENSSPUG00000009941PRDM510090.950Sphenodon_punctatus
ENSHGLG00100003696PRDM510088.667ENSSPAG00000013866prdm510087.975Stegastes_partitus
ENSHGLG00100003696PRDM510098.658ENSSSCG00000009101PRDM510098.658Sus_scrofa
ENSHGLG00100003696PRDM59389.873ENSTGUG00000001920PRDM510089.873Taeniopygia_guttata
ENSHGLG00100003696PRDM510088.667ENSTRUG00000013850prdm510088.667Takifugu_rubripes
ENSHGLG00100003696PRDM510074.834ENSTNIG00000005901prdm510070.566Tetraodon_nigroviridis
ENSHGLG00100003696PRDM590100.000ENSTBEG00000015386PRDM585100.000Tupaia_belangeri
ENSHGLG00100003696PRDM510097.785ENSTTRG00000010996PRDM510097.785Tursiops_truncatus
ENSHGLG00100003696PRDM59396.154ENSUAMG00000009994PRDM58496.154Ursus_americanus
ENSHGLG00100003696PRDM59598.418ENSUMAG00000003733PRDM59998.958Ursus_maritimus
ENSHGLG00100003696PRDM59781.536ENSVPAG00000007435PRDM510082.000Vicugna_pacos
ENSHGLG00100003696PRDM59098.418ENSVVUG00000013192PRDM510098.418Vulpes_vulpes
ENSHGLG00100003696PRDM510082.595ENSXETG00000002101prdm510082.595Xenopus_tropicalis
ENSHGLG00100003696PRDM510088.667ENSXCOG00000008567prdm510088.667Xiphophorus_couchianus
ENSHGLG00100003696PRDM59891.803ENSXMAG00000013825prdm510088.667Xiphophorus_maculatus

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