EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100003934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 804 bases
Position: chrJH170748.1:515305-516108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005191	LSM	PF01423.22	4.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005271	-	303	-	ENSHGLP00100005191	100 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100003934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100003934	-	73	36.000	ENSHGLG00100012152	-	64	36.000
ENSHGLG00100003934	-	95	92.632	ENSHGLG00100012166	-	99	92.632
ENSHGLG00100003934	-	88	34.091	ENSHGLG00100017660	LSM1	65	34.091
ENSHGLG00100003934	-	70	34.211	ENSHGLG00100000852	LSM7	72	34.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003934	-	95	96.842	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSHGLG00100003934	-	94	91.489	ENSAPOG00000008649	lsm8	98	91.489	Acanthochromis_polyacanthus
ENSHGLG00100003934	-	95	96.842	ENSAMEG00000001162	LSM8	99	96.842	Ailuropoda_melanoleuca
ENSHGLG00100003934	-	73	95.890	ENSACIG00000014694	lsm8	97	95.890	Amphilophus_citrinellus
ENSHGLG00100003934	-	94	91.489	ENSAOCG00000013926	lsm8	98	91.489	Amphiprion_ocellaris
ENSHGLG00100003934	-	94	91.489	ENSAPEG00000023502	lsm8	98	91.489	Amphiprion_percula
ENSHGLG00100003934	-	73	95.890	ENSATEG00000023432	lsm8	97	95.890	Anabas_testudineus
ENSHGLG00100003934	-	88	93.182	ENSAPLG00000005115	LSM8	89	93.182	Anas_platyrhynchos
ENSHGLG00100003934	-	95	96.842	ENSANAG00000027771	LSM8	99	96.842	Aotus_nancymaae
ENSHGLG00100003934	-	94	91.489	ENSACLG00000011253	lsm8	98	91.489	Astatotilapia_calliptera
ENSHGLG00100003934	-	94	93.617	ENSAMXG00000042902	lsm8	98	93.617	Astyanax_mexicanus
ENSHGLG00100003934	-	95	96.842	ENSBTAG00000012649	LSM8	99	96.842	Bos_taurus
ENSHGLG00100003934	-	91	59.341	WBGene00003082	lsm-8	93	59.341	Caenorhabditis_elegans
ENSHGLG00100003934	-	95	96.842	ENSCJAG00000046406	LSM8	99	96.842	Callithrix_jacchus
ENSHGLG00100003934	-	95	96.842	ENSCAFG00000016459	LSM8	96	96.842	Canis_familiaris
ENSHGLG00100003934	-	95	96.842	ENSCAFG00020007643	-	99	96.842	Canis_lupus_dingo
ENSHGLG00100003934	-	85	97.647	ENSCAFG00020012800	-	66	97.647	Canis_lupus_dingo
ENSHGLG00100003934	-	84	96.429	ENSCHIG00000014201	LSM8	89	96.429	Capra_hircus
ENSHGLG00100003934	-	95	96.842	ENSTSYG00000032434	LSM8	99	96.842	Carlito_syrichta
ENSHGLG00100003934	-	73	94.521	ENSCAPG00000008253	LSM8	99	94.521	Cavia_aperea
ENSHGLG00100003934	-	95	96.842	ENSCPOG00000035673	LSM8	99	96.842	Cavia_porcellus
ENSHGLG00100003934	-	95	96.842	ENSCCAG00000021329	LSM8	99	96.842	Cebus_capucinus
ENSHGLG00100003934	-	95	96.842	ENSCATG00000045302	LSM8	99	96.842	Cercocebus_atys
ENSHGLG00100003934	-	95	96.842	ENSCLAG00000003726	LSM8	99	96.842	Chinchilla_lanigera
ENSHGLG00100003934	-	95	92.632	ENSCSAG00000019007	-	99	92.632	Chlorocebus_sabaeus
ENSHGLG00100003934	-	95	96.842	ENSCSAG00000010802	-	99	96.842	Chlorocebus_sabaeus
ENSHGLG00100003934	-	84	96.429	ENSCPBG00000008154	LSM8	86	96.429	Chrysemys_picta_bellii
ENSHGLG00100003934	-	94	76.596	ENSCING00000024877	-	98	76.596	Ciona_intestinalis
ENSHGLG00100003934	-	95	96.842	ENSCANG00000040728	LSM8	99	96.842	Colobus_angolensis_palliatus
ENSHGLG00100003934	-	95	96.842	ENSCGRG00001000450	Lsm8	99	96.842	Cricetulus_griseus_chok1gshd
ENSHGLG00100003934	-	84	96.429	ENSCGRG00000005587	Lsm8	99	96.429	Cricetulus_griseus_crigri
ENSHGLG00100003934	-	94	79.787	ENSCSEG00000004164	lsm8	98	79.787	Cynoglossus_semilaevis
ENSHGLG00100003934	-	94	90.426	ENSCVAG00000020547	lsm8	98	90.426	Cyprinodon_variegatus
ENSHGLG00100003934	-	94	90.426	ENSDARG00000091656	lsm8	98	90.426	Danio_rerio
ENSHGLG00100003934	-	95	96.842	ENSDNOG00000034613	LSM8	99	96.842	Dasypus_novemcinctus
ENSHGLG00100003934	-	95	96.842	ENSDORG00000027868	Lsm8	99	96.842	Dipodomys_ordii
ENSHGLG00100003934	-	92	68.478	FBgn0035271	CG2021	97	68.478	Drosophila_melanogaster
ENSHGLG00100003934	-	94	97.872	ENSETEG00000011594	LSM8	98	97.872	Echinops_telfairi
ENSHGLG00100003934	-	72	91.667	ENSEBUG00000012017	lsm8	97	91.667	Eptatretus_burgeri
ENSHGLG00100003934	-	94	97.872	ENSEASG00005008932	LSM8	61	97.872	Equus_asinus_asinus
ENSHGLG00100003934	-	84	96.429	ENSECAG00000024025	LSM8	76	96.429	Equus_caballus
ENSHGLG00100003934	-	94	90.426	ENSELUG00000010138	lsm8	98	90.426	Esox_lucius
ENSHGLG00100003934	-	82	73.171	ENSFCAG00000044794	-	83	73.171	Felis_catus
ENSHGLG00100003934	-	95	96.842	ENSFCAG00000036620	-	99	96.842	Felis_catus
ENSHGLG00100003934	-	94	97.872	ENSFALG00000010023	LSM8	98	97.872	Ficedula_albicollis
ENSHGLG00100003934	-	95	96.842	ENSFDAG00000019530	LSM8	99	96.842	Fukomys_damarensis
ENSHGLG00100003934	-	94	91.489	ENSFHEG00000013729	lsm8	98	91.489	Fundulus_heteroclitus
ENSHGLG00100003934	-	94	97.872	ENSGALG00000009110	LSM8	98	97.872	Gallus_gallus
ENSHGLG00100003934	-	94	90.426	ENSGAFG00000001135	lsm8	98	90.426	Gambusia_affinis
ENSHGLG00100003934	-	95	96.842	ENSGAGG00000017366	LSM8	99	96.842	Gopherus_agassizii
ENSHGLG00100003934	-	95	96.842	ENSGGOG00000041883	LSM8	99	96.842	Gorilla_gorilla
ENSHGLG00100003934	-	94	91.489	ENSHBUG00000003646	lsm8	98	91.489	Haplochromis_burtoni
ENSHGLG00100003934	-	95	91.579	ENSHGLG00000019782	-	99	91.579	Heterocephalus_glaber_female
ENSHGLG00100003934	-	68	100.000	ENSHGLG00000001988	-	99	100.000	Heterocephalus_glaber_female
ENSHGLG00100003934	-	94	90.426	ENSHCOG00000005037	lsm8	98	90.426	Hippocampus_comes
ENSHGLG00100003934	-	94	93.617	ENSIPUG00000019811	NAA38	98	93.617	Ictalurus_punctatus
ENSHGLG00100003934	-	87	86.207	ENSSTOG00000034801	-	81	86.207	Ictidomys_tridecemlineatus
ENSHGLG00100003934	-	95	96.842	ENSSTOG00000009039	LSM8	99	96.842	Ictidomys_tridecemlineatus
ENSHGLG00100003934	-	95	96.842	ENSJJAG00000009031	Lsm8	98	96.842	Jaculus_jaculus
ENSHGLG00100003934	-	94	91.489	ENSKMAG00000018983	lsm8	98	91.489	Kryptolebias_marmoratus
ENSHGLG00100003934	-	94	93.617	ENSLACG00000010231	LSM8	98	93.617	Latimeria_chalumnae
ENSHGLG00100003934	-	94	92.553	ENSLOCG00000015580	lsm8	98	92.553	Lepisosteus_oculatus
ENSHGLG00100003934	-	95	95.833	ENSLAFG00000011242	LSM8	99	95.833	Loxodonta_africana
ENSHGLG00100003934	-	95	92.632	ENSMFAG00000013044	-	99	92.632	Macaca_fascicularis
ENSHGLG00100003934	-	95	96.842	ENSMFAG00000035798	LSM8	99	96.842	Macaca_fascicularis
ENSHGLG00100003934	-	95	96.842	ENSMMUG00000046401	LSM8	99	93.151	Macaca_mulatta
ENSHGLG00100003934	-	74	91.892	ENSMNEG00000011141	-	99	91.892	Macaca_nemestrina
ENSHGLG00100003934	-	95	96.842	ENSMNEG00000036764	-	99	96.842	Macaca_nemestrina
ENSHGLG00100003934	-	95	81.053	ENSMLEG00000039324	-	99	81.053	Mandrillus_leucophaeus
ENSHGLG00100003934	-	95	96.842	ENSMLEG00000035828	-	99	96.842	Mandrillus_leucophaeus
ENSHGLG00100003934	-	73	95.890	ENSMAMG00000018839	lsm8	97	95.890	Mastacembelus_armatus
ENSHGLG00100003934	-	94	91.489	ENSMZEG00005019138	lsm8	98	91.489	Maylandia_zebra
ENSHGLG00100003934	-	94	97.872	ENSMGAG00000008808	LSM8	98	97.872	Meleagris_gallopavo
ENSHGLG00100003934	-	68	92.647	ENSMAUG00000020287	-	95	90.000	Mesocricetus_auratus
ENSHGLG00100003934	-	89	96.629	ENSMAUG00000015721	-	94	96.629	Mesocricetus_auratus
ENSHGLG00100003934	-	95	77.895	ENSMAUG00000015356	-	99	77.895	Mesocricetus_auratus
ENSHGLG00100003934	-	95	96.842	ENSMICG00000042730	LSM8	99	96.842	Microcebus_murinus
ENSHGLG00100003934	-	95	96.842	ENSMOCG00000001688	Lsm8	99	96.842	Microtus_ochrogaster
ENSHGLG00100003934	-	73	95.890	ENSMMOG00000006046	lsm8	97	95.890	Mola_mola
ENSHGLG00100003934	-	76	83.333	ENSMODG00000015729	LSM8	100	83.333	Monodelphis_domestica
ENSHGLG00100003934	-	94	92.553	ENSMALG00000000405	lsm8	98	92.553	Monopterus_albus
ENSHGLG00100003934	-	95	96.842	MGP_CAROLIEiJ_G0028125	-	99	96.842	Mus_caroli
ENSHGLG00100003934	-	95	96.842	ENSMUSG00000044155	Lsm8	99	96.842	Mus_musculus
ENSHGLG00100003934	-	95	96.842	MGP_PahariEiJ_G0021881	Lsm8	99	96.842	Mus_pahari
ENSHGLG00100003934	-	95	96.842	MGP_SPRETEiJ_G0029125	-	99	96.842	Mus_spretus
ENSHGLG00100003934	-	95	96.842	ENSMLUG00000006837	-	99	96.842	Myotis_lucifugus
ENSHGLG00100003934	-	95	95.789	ENSMLUG00000027762	-	99	95.789	Myotis_lucifugus
ENSHGLG00100003934	-	95	96.842	ENSNGAG00000016554	Lsm8	99	96.842	Nannospalax_galili
ENSHGLG00100003934	-	94	91.489	ENSNBRG00000014441	lsm8	98	91.489	Neolamprologus_brichardi
ENSHGLG00100003934	-	95	96.842	ENSNLEG00000011768	LSM8	99	96.842	Nomascus_leucogenys
ENSHGLG00100003934	-	95	85.263	ENSMEUG00000007801	LSM8	99	85.263	Notamacropus_eugenii
ENSHGLG00100003934	-	84	96.429	ENSOPRG00000014809	LSM8	99	96.429	Ochotona_princeps
ENSHGLG00100003934	-	86	81.395	ENSODEG00000020290	-	100	81.395	Octodon_degus
ENSHGLG00100003934	-	95	96.842	ENSODEG00000000418	-	99	96.842	Octodon_degus
ENSHGLG00100003934	-	95	95.789	ENSOANG00000014536	LSM8	99	95.789	Ornithorhynchus_anatinus
ENSHGLG00100003934	-	95	95.833	ENSOCUG00000017359	LSM8	99	95.833	Oryctolagus_cuniculus
ENSHGLG00100003934	-	94	80.851	ENSORLG00000017432	lsm8	98	80.851	Oryzias_latipes
ENSHGLG00100003934	-	94	80.851	ENSORLG00020004376	lsm8	98	80.851	Oryzias_latipes_hni
ENSHGLG00100003934	-	94	91.489	ENSORLG00015003757	lsm8	98	91.489	Oryzias_latipes_hsok
ENSHGLG00100003934	-	94	78.723	ENSOMEG00000022509	lsm8	98	79.787	Oryzias_melastigma
ENSHGLG00100003934	-	95	96.842	ENSOGAG00000013377	LSM8	99	96.842	Otolemur_garnettii
ENSHGLG00100003934	-	95	96.842	ENSOARG00000017974	LSM8	99	96.842	Ovis_aries
ENSHGLG00100003934	-	74	95.946	ENSPPAG00000043228	-	99	95.946	Pan_paniscus
ENSHGLG00100003934	-	95	96.842	ENSPPRG00000006444	LSM8	99	96.842	Panthera_pardus
ENSHGLG00100003934	-	95	96.842	ENSPTIG00000004722	LSM8	99	96.842	Panthera_tigris_altaica
ENSHGLG00100003934	-	74	95.946	ENSPTRG00000046596	-	99	95.946	Pan_troglodytes
ENSHGLG00100003934	-	92	93.478	ENSPANG00000019395	-	96	93.478	Papio_anubis
ENSHGLG00100003934	-	95	96.842	ENSPANG00000035470	-	99	96.842	Papio_anubis
ENSHGLG00100003934	-	83	96.386	ENSPKIG00000006092	lsm8	84	96.386	Paramormyrops_kingsleyae
ENSHGLG00100003934	-	74	95.946	ENSPSIG00000017054	LSM8	99	95.946	Pelodiscus_sinensis
ENSHGLG00100003934	-	73	95.890	ENSPMGG00000016442	lsm8	97	95.890	Periophthalmus_magnuspinnatus
ENSHGLG00100003934	-	73	93.151	ENSPEMG00000009153	Lsm8	99	93.151	Peromyscus_maniculatus_bairdii
ENSHGLG00100003934	-	92	98.913	ENSPCIG00000021467	LSM8	97	98.913	Phascolarctos_cinereus
ENSHGLG00100003934	-	94	90.426	ENSPFOG00000012340	lsm8	98	90.426	Poecilia_formosa
ENSHGLG00100003934	-	94	84.043	ENSPLAG00000000516	lsm8	98	84.043	Poecilia_latipinna
ENSHGLG00100003934	-	94	90.426	ENSPMEG00000022567	lsm8	98	90.426	Poecilia_mexicana
ENSHGLG00100003934	-	71	83.333	ENSPREG00000005527	lsm8	70	83.333	Poecilia_reticulata
ENSHGLG00100003934	-	95	96.842	ENSPPYG00000017942	LSM8	99	96.842	Pongo_abelii
ENSHGLG00100003934	-	92	78.261	ENSPCOG00000017982	-	95	78.261	Propithecus_coquereli
ENSHGLG00100003934	-	95	96.842	ENSPCOG00000003309	-	99	96.842	Propithecus_coquereli
ENSHGLG00100003934	-	84	95.238	ENSPVAG00000000990	LSM8	99	95.238	Pteropus_vampyrus
ENSHGLG00100003934	-	94	91.489	ENSPNYG00000011448	lsm8	98	91.489	Pundamilia_nyererei
ENSHGLG00100003934	-	94	93.617	ENSPNAG00000010252	lsm8	98	93.617	Pygocentrus_nattereri
ENSHGLG00100003934	-	95	96.842	ENSRNOG00000058677	Lsm8	99	96.842	Rattus_norvegicus
ENSHGLG00100003934	-	95	96.842	ENSRBIG00000032851	LSM8	99	96.842	Rhinopithecus_bieti
ENSHGLG00100003934	-	95	96.842	ENSRROG00000039618	LSM8	99	96.842	Rhinopithecus_roxellana
ENSHGLG00100003934	-	95	96.842	ENSSBOG00000023223	LSM8	99	96.842	Saimiri_boliviensis_boliviensis
ENSHGLG00100003934	-	95	96.842	ENSSHAG00000018435	-	99	96.842	Sarcophilus_harrisii
ENSHGLG00100003934	-	94	90.426	ENSSFOG00015004412	lsm8	98	90.426	Scleropages_formosus
ENSHGLG00100003934	-	74	93.243	ENSSMAG00000009458	lsm8	99	93.243	Scophthalmus_maximus
ENSHGLG00100003934	-	94	91.489	ENSSDUG00000014702	lsm8	98	91.489	Seriola_dumerili
ENSHGLG00100003934	-	73	95.890	ENSSLDG00000016870	lsm8	97	95.890	Seriola_lalandi_dorsalis
ENSHGLG00100003934	-	71	95.775	ENSSARG00000009628	-	99	95.775	Sorex_araneus
ENSHGLG00100003934	-	95	96.842	ENSSPUG00000017419	LSM8	99	96.842	Sphenodon_punctatus
ENSHGLG00100003934	-	94	91.489	ENSSPAG00000021422	lsm8	98	91.489	Stegastes_partitus
ENSHGLG00100003934	-	95	96.842	ENSSSCG00000021652	LSM8	99	96.842	Sus_scrofa
ENSHGLG00100003934	-	94	95.745	ENSTGUG00000016823	-	98	95.745	Taeniopygia_guttata
ENSHGLG00100003934	-	94	96.809	ENSTGUG00000004730	-	98	96.809	Taeniopygia_guttata
ENSHGLG00100003934	-	94	91.489	ENSTRUG00000025192	lsm8	98	91.489	Takifugu_rubripes
ENSHGLG00100003934	-	94	91.489	ENSTNIG00000002864	lsm8	98	91.489	Tetraodon_nigroviridis
ENSHGLG00100003934	-	95	96.842	ENSTTRG00000001023	LSM8	99	96.842	Tursiops_truncatus
ENSHGLG00100003934	-	87	93.103	ENSUAMG00000006943	-	91	93.103	Ursus_americanus
ENSHGLG00100003934	-	87	93.103	ENSUMAG00000003073	LSM8	93	93.103	Ursus_maritimus
ENSHGLG00100003934	-	95	96.842	ENSVPAG00000001530	LSM8	99	96.842	Vicugna_pacos
ENSHGLG00100003934	-	74	93.243	ENSVVUG00000013248	-	81	93.243	Vulpes_vulpes
ENSHGLG00100003934	-	87	96.552	ENSXETG00000021829	lsm8	90	96.552	Xenopus_tropicalis
ENSHGLG00100003934	-	94	88.298	ENSXCOG00000012938	lsm8	98	88.298	Xiphophorus_couchianus
ENSHGLG00100003934	-	94	90.426	ENSXMAG00000025919	lsm8	98	90.426	Xiphophorus_maculatus