EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100003978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 8337 bases
Position: chrJH172234.1:798445-806781
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005244	zf-CCHC	PF00098.23	1.7e-07	1	1
ENSHGLP00100005244	RRM_5	PF13893.6	2e-08	1	2
ENSHGLP00100005244	RRM_5	PF13893.6	2e-08	2	2
ENSHGLP00100005244	RRM_1	PF00076.22	7.5e-35	1	2
ENSHGLP00100005244	RRM_1	PF00076.22	7.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005325	-	1077	-	ENSHGLP00100005244	358 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100003978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100003978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100003978	-	96	85.673	ENSHGLG00100020033	-	100	85.673
ENSHGLG00100003978	-	100	79.778	ENSHGLG00100003854	RBM4	97	99.275
ENSHGLG00100003978	-	100	68.436	ENSHGLG00100011767	-	100	66.201
ENSHGLG00100003978	-	54	94.203	ENSHGLG00100011999	-	95	94.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100003978	-	96	98.780	ENSG00000173933	RBM4	100	98.780	Homo_sapiens
ENSHGLG00100003978	-	100	97.500	ENSG00000173914	RBM4B	100	97.500	Homo_sapiens
ENSHGLG00100003978	-	99	63.215	ENSG00000248643	RBM14-RBM4	100	62.842	Homo_sapiens
ENSHGLG00100003978	-	100	98.056	ENSAMEG00000010906	RBM4B	100	98.056	Ailuropoda_melanoleuca
ENSHGLG00100003978	-	100	86.885	ENSAMEG00000010914	RBM4	100	87.158	Ailuropoda_melanoleuca
ENSHGLG00100003978	-	100	97.222	ENSANAG00000023478	RBM4B	100	97.222	Aotus_nancymaae
ENSHGLG00100003978	-	100	97.222	ENSBTAG00000000423	RBM4B	100	97.222	Bos_taurus
ENSHGLG00100003978	-	100	87.603	ENSBTAG00000031688	RBM4	100	88.154	Bos_taurus
ENSHGLG00100003978	-	100	97.222	ENSCJAG00000013666	RBM4B	100	97.222	Callithrix_jacchus
ENSHGLG00100003978	-	100	86.885	ENSCAFG00000012388	RBM4	100	87.158	Canis_familiaris
ENSHGLG00100003978	-	100	97.778	ENSCAFG00000012378	RBM4B	100	97.778	Canis_familiaris
ENSHGLG00100003978	-	100	97.778	ENSCAFG00020015519	RBM4B	100	97.778	Canis_lupus_dingo
ENSHGLG00100003978	-	100	86.885	ENSCAFG00020015515	RBM4	100	87.158	Canis_lupus_dingo
ENSHGLG00100003978	-	100	87.603	ENSCHIG00000020613	RBM4	100	88.154	Capra_hircus
ENSHGLG00100003978	-	100	97.500	ENSCHIG00000008907	RBM4B	100	97.500	Capra_hircus
ENSHGLG00100003978	-	65	91.102	ENSTSYG00000009580	RBM4B	96	93.220	Carlito_syrichta
ENSHGLG00100003978	-	100	98.889	ENSCAPG00000009570	RBM4B	100	98.889	Cavia_aperea
ENSHGLG00100003978	-	100	86.612	ENSCAPG00000016600	RBM4	97	99.275	Cavia_aperea
ENSHGLG00100003978	-	100	98.889	ENSCPOG00000013689	RBM4B	100	98.889	Cavia_porcellus
ENSHGLG00100003978	-	100	86.612	ENSCPOG00000013194	RBM4	97	99.275	Cavia_porcellus
ENSHGLG00100003978	-	56	71.642	ENSCCAG00000023319	-	100	71.642	Cebus_capucinus
ENSHGLG00100003978	-	100	97.500	ENSCCAG00000016501	RBM4B	100	97.500	Cebus_capucinus
ENSHGLG00100003978	-	100	97.500	ENSCATG00000035353	RBM4B	100	97.500	Cercocebus_atys
ENSHGLG00100003978	-	100	99.443	ENSCLAG00000015287	RBM4B	100	99.443	Chinchilla_lanigera
ENSHGLG00100003978	-	100	86.339	ENSCLAG00000014756	RBM4	97	99.275	Chinchilla_lanigera
ENSHGLG00100003978	-	100	97.500	ENSCSAG00000008361	RBM4B	100	97.500	Chlorocebus_sabaeus
ENSHGLG00100003978	-	61	79.386	ENSCHOG00000009753	RBM14-RBM4	100	80.263	Choloepus_hoffmanni
ENSHGLG00100003978	-	100	97.778	ENSCHOG00000002892	RBM4B	100	97.778	Choloepus_hoffmanni
ENSHGLG00100003978	-	100	74.803	ENSCPBG00000023800	-	100	74.737	Chrysemys_picta_bellii
ENSHGLG00100003978	-	100	97.500	ENSCANG00000021868	RBM4B	100	97.500	Colobus_angolensis_palliatus
ENSHGLG00100003978	-	100	87.535	ENSCGRG00001016609	-	97	100.000	Cricetulus_griseus_chok1gshd
ENSHGLG00100003978	-	100	95.531	ENSCGRG00001024693	Rbm4b	100	95.531	Cricetulus_griseus_chok1gshd
ENSHGLG00100003978	-	100	87.535	ENSCGRG00000010183	-	97	100.000	Cricetulus_griseus_crigri
ENSHGLG00100003978	-	100	95.531	ENSCGRG00000012112	Rbm4b	100	95.531	Cricetulus_griseus_crigri
ENSHGLG00100003978	-	100	86.339	ENSDNOG00000032390	RBM4	100	86.612	Dasypus_novemcinctus
ENSHGLG00100003978	-	100	96.657	ENSDNOG00000045639	-	100	96.657	Dasypus_novemcinctus
ENSHGLG00100003978	-	100	97.772	ENSDNOG00000019500	-	100	97.772	Dasypus_novemcinctus
ENSHGLG00100003978	-	100	96.648	ENSDORG00000029108	Rbm4b	100	96.648	Dipodomys_ordii
ENSHGLG00100003978	-	100	86.538	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
ENSHGLG00100003978	-	61	72.851	ENSETEG00000018142	-	100	71.493	Echinops_telfairi
ENSHGLG00100003978	-	100	98.056	ENSEASG00005005068	RBM4B	100	98.056	Equus_asinus_asinus
ENSHGLG00100003978	-	100	87.845	ENSEASG00005005064	RBM4	100	88.122	Equus_asinus_asinus
ENSHGLG00100003978	-	100	97.778	ENSECAG00000022987	RBM4B	100	97.778	Equus_caballus
ENSHGLG00100003978	-	100	87.845	ENSECAG00000022940	RBM4	100	88.122	Equus_caballus
ENSHGLG00100003978	-	100	90.959	ENSEEUG00000000058	RBM4B	100	91.233	Erinaceus_europaeus
ENSHGLG00100003978	-	100	98.333	ENSFCAG00000007394	RBM4B	100	98.333	Felis_catus
ENSHGLG00100003978	-	100	86.885	ENSFCAG00000029651	RBM4	97	98.551	Felis_catus
ENSHGLG00100003978	-	100	70.270	ENSFALG00000002073	-	100	69.377	Ficedula_albicollis
ENSHGLG00100003978	-	100	99.164	ENSFDAG00000015530	RBM4B	100	99.164	Fukomys_damarensis
ENSHGLG00100003978	-	100	86.339	ENSFDAG00000005447	RBM4	97	99.275	Fukomys_damarensis
ENSHGLG00100003978	-	100	77.067	ENSGALG00000037946	-	100	76.203	Gallus_gallus
ENSHGLG00100003978	-	100	74.803	ENSGAGG00000008553	-	100	74.737	Gopherus_agassizii
ENSHGLG00100003978	-	100	97.500	ENSGGOG00000011698	RBM4B	100	97.500	Gorilla_gorilla
ENSHGLG00100003978	-	100	99.167	ENSHGLG00000016412	-	100	99.167	Heterocephalus_glaber_female
ENSHGLG00100003978	-	78	62.538	ENSHGLG00000000117	-	95	73.889	Heterocephalus_glaber_female
ENSHGLG00100003978	-	100	86.339	ENSHGLG00000009991	RBM4	97	99.275	Heterocephalus_glaber_female
ENSHGLG00100003978	-	100	84.358	ENSHGLG00000002853	-	100	84.358	Heterocephalus_glaber_female
ENSHGLG00100003978	-	100	86.612	ENSSTOG00000022811	RBM4	97	98.551	Ictidomys_tridecemlineatus
ENSHGLG00100003978	-	100	98.056	ENSSTOG00000011226	RBM4B	100	98.056	Ictidomys_tridecemlineatus
ENSHGLG00100003978	-	100	94.972	ENSJJAG00000020870	Rbm4b	100	94.972	Jaculus_jaculus
ENSHGLG00100003978	-	100	86.111	ENSLAFG00000028147	-	100	86.885	Loxodonta_africana
ENSHGLG00100003978	-	100	91.389	ENSLAFG00000002285	RBM4B	100	93.333	Loxodonta_africana
ENSHGLG00100003978	-	100	97.500	ENSMFAG00000033927	RBM4B	100	97.500	Macaca_fascicularis
ENSHGLG00100003978	-	100	97.500	ENSMNEG00000043371	RBM4B	100	97.500	Macaca_nemestrina
ENSHGLG00100003978	-	100	97.500	ENSMLEG00000028563	RBM4B	100	97.500	Mandrillus_leucophaeus
ENSHGLG00100003978	-	100	93.575	ENSMAUG00000017027	Rbm4b	100	93.575	Mesocricetus_auratus
ENSHGLG00100003978	-	100	96.944	ENSMICG00000003820	RBM4B	100	96.944	Microcebus_murinus
ENSHGLG00100003978	-	100	95.810	ENSMOCG00000001835	Rbm4b	100	95.810	Microtus_ochrogaster
ENSHGLG00100003978	-	100	85.366	ENSMODG00000008056	-	100	85.637	Monodelphis_domestica
ENSHGLG00100003978	-	100	88.122	MGP_CAROLIEiJ_G0022516	-	97	100.000	Mus_caroli
ENSHGLG00100003978	-	100	97.207	MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.207	Mus_caroli
ENSHGLG00100003978	-	99	63.085	MGP_CAROLIEiJ_G0022514	-	100	63.636	Mus_caroli
ENSHGLG00100003978	-	100	96.927	ENSMUSG00000033760	Rbm4b	100	96.927	Mus_musculus
ENSHGLG00100003978	-	100	87.569	ENSMUSG00000094936	Rbm4	100	100.000	Mus_musculus
ENSHGLG00100003978	-	100	87.569	ENSMUSG00000096370	Gm21992	100	88.122	Mus_musculus
ENSHGLG00100003978	-	100	87.328	MGP_PahariEiJ_G0014011	-	100	87.879	Mus_pahari
ENSHGLG00100003978	-	100	96.648	MGP_PahariEiJ_G0014012	Rbm4b	100	96.648	Mus_pahari
ENSHGLG00100003978	-	100	87.328	MGP_PahariEiJ_G0014013	-	97	100.000	Mus_pahari
ENSHGLG00100003978	-	100	88.612	MGP_SPRETEiJ_G0023429	-	100	88.612	Mus_spretus
ENSHGLG00100003978	-	100	69.753	MGP_SPRETEiJ_G0023428	-	94	70.370	Mus_spretus
ENSHGLG00100003978	-	100	69.753	MGP_SPRETEiJ_G0023430	-	100	70.370	Mus_spretus
ENSHGLG00100003978	-	100	86.612	ENSMPUG00000003443	RBM4	100	86.885	Mustela_putorius_furo
ENSHGLG00100003978	-	100	97.778	ENSMPUG00000003450	RBM4B	100	97.778	Mustela_putorius_furo
ENSHGLG00100003978	-	100	95.531	ENSMLUG00000001290	RBM4B	100	95.531	Myotis_lucifugus
ENSHGLG00100003978	-	99	85.124	ENSMLUG00000004076	RBM4	95	85.950	Myotis_lucifugus
ENSHGLG00100003978	-	100	96.369	ENSNGAG00000016292	Rbm4b	100	96.369	Nannospalax_galili
ENSHGLG00100003978	-	100	96.667	ENSNLEG00000006213	RBM4B	100	96.667	Nomascus_leucogenys
ENSHGLG00100003978	-	100	87.432	ENSNLEG00000035021	RBM4	97	98.551	Nomascus_leucogenys
ENSHGLG00100003978	-	100	87.637	ENSMEUG00000001445	-	100	87.912	Notamacropus_eugenii
ENSHGLG00100003978	-	61	80.702	ENSMEUG00000005739	-	100	80.702	Notamacropus_eugenii
ENSHGLG00100003978	-	100	87.158	ENSOPRG00000009149	RBM4	100	87.158	Ochotona_princeps
ENSHGLG00100003978	-	100	97.222	ENSOPRG00000009158	RBM4B	100	97.222	Ochotona_princeps
ENSHGLG00100003978	-	100	72.222	ENSODEG00000001866	-	100	71.745	Octodon_degus
ENSHGLG00100003978	-	100	98.611	ENSODEG00000017696	-	100	98.611	Octodon_degus
ENSHGLG00100003978	-	100	80.726	ENSOANG00000003143	-	84	79.666	Ornithorhynchus_anatinus
ENSHGLG00100003978	-	100	87.187	ENSOANG00000011036	-	100	86.630	Ornithorhynchus_anatinus
ENSHGLG00100003978	-	100	98.056	ENSOCUG00000006695	LARK	100	98.056	Oryctolagus_cuniculus
ENSHGLG00100003978	-	100	86.612	ENSOCUG00000004731	RBM4	100	86.885	Oryctolagus_cuniculus
ENSHGLG00100003978	-	100	87.193	ENSOGAG00000015647	RBM4	100	86.339	Otolemur_garnettii
ENSHGLG00100003978	-	100	97.778	ENSOGAG00000015648	RBM4B	100	97.778	Otolemur_garnettii
ENSHGLG00100003978	-	100	86.501	ENSOARG00000007700	RBM4	100	87.052	Ovis_aries
ENSHGLG00100003978	-	100	95.604	ENSOARG00000007759	RBM4B	100	95.604	Ovis_aries
ENSHGLG00100003978	-	100	97.500	ENSPPAG00000015125	RBM4B	100	97.500	Pan_paniscus
ENSHGLG00100003978	-	100	98.056	ENSPPRG00000003388	RBM4B	100	98.056	Panthera_pardus
ENSHGLG00100003978	-	100	86.885	ENSPPRG00000003533	RBM4	97	98.551	Panthera_pardus
ENSHGLG00100003978	-	100	98.056	ENSPTIG00000015426	RBM4B	100	98.056	Panthera_tigris_altaica
ENSHGLG00100003978	-	100	80.716	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSHGLG00100003978	-	100	97.500	ENSPTRG00000003935	RBM4B	100	97.500	Pan_troglodytes
ENSHGLG00100003978	-	100	97.500	ENSPANG00000020672	RBM4B	100	97.500	Papio_anubis
ENSHGLG00100003978	-	77	80.623	ENSPSIG00000003477	-	95	79.795	Pelodiscus_sinensis
ENSHGLG00100003978	-	100	76.613	ENSPSIG00000003430	-	100	76.819	Pelodiscus_sinensis
ENSHGLG00100003978	-	100	96.379	ENSPEMG00000009144	Rbm4b	100	96.379	Peromyscus_maniculatus_bairdii
ENSHGLG00100003978	-	100	86.339	ENSPPYG00000003012	RBM4	100	86.027	Pongo_abelii
ENSHGLG00100003978	-	100	97.500	ENSPPYG00000003010	RBM4B	100	97.500	Pongo_abelii
ENSHGLG00100003978	-	100	87.432	ENSPCAG00000003393	-	100	88.251	Procavia_capensis
ENSHGLG00100003978	-	100	97.778	ENSPCOG00000027885	RBM4B	100	97.778	Propithecus_coquereli
ENSHGLG00100003978	-	100	97.778	ENSPVAG00000010487	RBM4B	100	97.778	Pteropus_vampyrus
ENSHGLG00100003978	-	100	86.612	ENSPVAG00000010486	RBM4	100	87.158	Pteropus_vampyrus
ENSHGLG00100003978	-	100	86.612	ENSRNOG00000050741	Rbm4	97	100.000	Rattus_norvegicus
ENSHGLG00100003978	-	100	97.486	ENSRNOG00000061795	Rbm4b	100	97.486	Rattus_norvegicus
ENSHGLG00100003978	-	100	97.500	ENSRBIG00000019394	RBM4B	100	97.500	Rhinopithecus_bieti
ENSHGLG00100003978	-	100	97.500	ENSRROG00000032850	RBM4B	100	97.500	Rhinopithecus_roxellana
ENSHGLG00100003978	-	100	96.944	ENSSBOG00000034474	RBM4B	100	96.944	Saimiri_boliviensis_boliviensis
ENSHGLG00100003978	-	100	88.579	ENSSHAG00000008386	-	100	88.301	Sarcophilus_harrisii
ENSHGLG00100003978	-	100	96.657	ENSSARG00000010710	RBM4B	100	96.657	Sorex_araneus
ENSHGLG00100003978	-	100	86.885	ENSSSCG00000032437	RBM4	100	87.158	Sus_scrofa
ENSHGLG00100003978	-	78	79.522	ENSTGUG00000016779	-	94	78.767	Taeniopygia_guttata
ENSHGLG00100003978	-	100	96.927	ENSTBEG00000003748	RBM4B	100	96.927	Tupaia_belangeri
ENSHGLG00100003978	-	64	94.091	ENSTBEG00000003727	-	68	94.836	Tupaia_belangeri
ENSHGLG00100003978	-	100	98.056	ENSTTRG00000011166	RBM4B	100	98.056	Tursiops_truncatus
ENSHGLG00100003978	-	100	86.339	ENSTTRG00000011164	RBM4	100	86.612	Tursiops_truncatus
ENSHGLG00100003978	-	100	97.778	ENSUAMG00000004745	RBM4B	100	97.778	Ursus_americanus
ENSHGLG00100003978	-	100	86.885	ENSUAMG00000014882	RBM4	97	98.551	Ursus_americanus
ENSHGLG00100003978	-	65	95.319	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
ENSHGLG00100003978	-	100	86.612	ENSVPAG00000001949	RBM4	100	86.885	Vicugna_pacos
ENSHGLG00100003978	-	100	97.778	ENSVPAG00000001950	RBM4B	100	97.778	Vicugna_pacos
ENSHGLG00100003978	-	100	86.339	ENSVVUG00000010622	RBM4	100	86.612	Vulpes_vulpes
ENSHGLG00100003978	-	100	97.778	ENSVVUG00000010619	RBM4B	100	97.778	Vulpes_vulpes