EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 129484 bases
Position: chrJH173439.1:70420-199903
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005308	RRM_1	PF00076.22	4.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005389	-	1570	-	ENSHGLP00100005308	131 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004028	-	90	50.847	ENSHGLG00100007384	HNRNPAB	67	50.847
ENSHGLG00100004028	-	99	41.667	ENSHGLG00100006677	-	52	44.167
ENSHGLG00100004028	-	90	45.614	ENSHGLG00100019080	-	52	45.614
ENSHGLG00100004028	-	99	41.667	ENSHGLG00100015974	HNRNPA1	53	44.167
ENSHGLG00100004028	-	90	42.500	ENSHGLG00100001909	-	56	42.500
ENSHGLG00100004028	-	99	39.048	ENSHGLG00100013306	-	54	41.935
ENSHGLG00100004028	-	90	48.305	ENSHGLG00100010072	-	60	48.305
ENSHGLG00100004028	-	90	42.500	ENSHGLG00100001336	-	52	42.500
ENSHGLG00100004028	-	90	42.373	ENSHGLG00100017719	-	52	42.105
ENSHGLG00100004028	-	53	42.857	ENSHGLG00100001361	-	81	36.170
ENSHGLG00100004028	-	87	38.596	ENSHGLG00100003583	-	60	38.596
ENSHGLG00100004028	-	90	45.378	ENSHGLG00100017644	-	77	45.378
ENSHGLG00100004028	-	90	52.542	ENSHGLG00100005996	HNRNPD	66	52.542
ENSHGLG00100004028	-	90	42.500	ENSHGLG00100004637	HNRNPA2B1	50	42.500
ENSHGLG00100004028	-	90	51.695	ENSHGLG00100005262	HNRNPDL	50	51.695
ENSHGLG00100004028	-	99	41.667	ENSHGLG00100010504	-	58	44.167
ENSHGLG00100004028	-	99	41.071	ENSHGLG00100006275	-	50	41.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004028	-	89	100.000	ENSG00000153944	MSI2	83	100.000	Homo_sapiens
ENSHGLG00100004028	-	87	96.491	ENSAPOG00000001658	msi2a	55	96.491	Acanthochromis_polyacanthus
ENSHGLG00100004028	-	87	100.000	ENSAMEG00000002697	MSI2	52	100.000	Ailuropoda_melanoleuca
ENSHGLG00100004028	-	85	88.288	ENSAOCG00000014822	msi2a	57	88.288	Amphiprion_ocellaris
ENSHGLG00100004028	-	87	96.491	ENSAPEG00000007706	msi2a	53	88.288	Amphiprion_percula
ENSHGLG00100004028	-	87	96.491	ENSATEG00000010498	msi2a	55	96.491	Anabas_testudineus
ENSHGLG00100004028	-	87	94.186	ENSATEG00000003301	-	50	94.186	Anabas_testudineus
ENSHGLG00100004028	-	87	100.000	ENSANAG00000037827	MSI2	67	100.000	Aotus_nancymaae
ENSHGLG00100004028	-	87	96.491	ENSACLG00000007752	msi2a	55	96.491	Astatotilapia_calliptera
ENSHGLG00100004028	-	87	98.246	ENSAMXG00000032796	msi2a	51	98.246	Astyanax_mexicanus
ENSHGLG00100004028	-	87	99.123	ENSAMXG00000010474	msi2b	55	99.123	Astyanax_mexicanus
ENSHGLG00100004028	-	87	100.000	ENSBTAG00000004406	MSI2	53	100.000	Bos_taurus
ENSHGLG00100004028	-	87	71.053	WBGene00003423	msi-1	53	71.053	Caenorhabditis_elegans
ENSHGLG00100004028	-	87	100.000	ENSCJAG00000013998	MSI2	67	100.000	Callithrix_jacchus
ENSHGLG00100004028	-	88	99.000	ENSCAFG00020025620	MSI2	54	96.330	Canis_lupus_dingo
ENSHGLG00100004028	-	87	100.000	ENSCHIG00000016580	MSI2	51	100.000	Capra_hircus
ENSHGLG00100004028	-	87	85.556	ENSCPOG00000034042	MSI2	51	85.556	Cavia_porcellus
ENSHGLG00100004028	-	87	100.000	ENSCCAG00000033927	MSI2	67	100.000	Cebus_capucinus
ENSHGLG00100004028	-	87	100.000	ENSCATG00000040879	MSI2	67	100.000	Cercocebus_atys
ENSHGLG00100004028	-	87	100.000	ENSCLAG00000014325	MSI2	70	93.333	Chinchilla_lanigera
ENSHGLG00100004028	-	87	100.000	ENSCSAG00000005633	MSI2	51	100.000	Chlorocebus_sabaeus
ENSHGLG00100004028	-	86	80.000	ENSCHOG00000008660	MSI2	55	80.000	Choloepus_hoffmanni
ENSHGLG00100004028	-	87	98.667	ENSCPBG00000009942	MSI2	58	97.368	Chrysemys_picta_bellii
ENSHGLG00100004028	-	87	65.854	ENSCSAVG00000010397	-	57	65.854	Ciona_savignyi
ENSHGLG00100004028	-	87	100.000	ENSCANG00000036414	MSI2	67	100.000	Colobus_angolensis_palliatus
ENSHGLG00100004028	-	87	100.000	ENSCGRG00001013330	Msi2	59	97.619	Cricetulus_griseus_chok1gshd
ENSHGLG00100004028	-	87	100.000	ENSCGRG00000003141	Msi2	51	100.000	Cricetulus_griseus_crigri
ENSHGLG00100004028	-	89	90.598	ENSCSEG00000013549	msi2a	66	90.598	Cynoglossus_semilaevis
ENSHGLG00100004028	-	87	96.491	ENSCVAG00000017075	msi2a	55	96.491	Cyprinodon_variegatus
ENSHGLG00100004028	-	88	97.391	ENSDARG00000032614	msi2b	100	96.552	Danio_rerio
ENSHGLG00100004028	-	87	100.000	ENSDNOG00000014501	MSI2	52	100.000	Dasypus_novemcinctus
ENSHGLG00100004028	-	86	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSHGLG00100004028	-	87	81.250	FBgn0260943	Rbp6	53	81.250	Drosophila_melanogaster
ENSHGLG00100004028	-	87	100.000	ENSECAG00000011435	MSI2	53	100.000	Equus_caballus
ENSHGLG00100004028	-	87	98.246	ENSELUG00000011747	msi2a	57	98.246	Esox_lucius
ENSHGLG00100004028	-	87	97.368	ENSELUG00000001361	msi2b	67	96.491	Esox_lucius
ENSHGLG00100004028	-	87	100.000	ENSFCAG00000041686	MSI2	70	98.551	Felis_catus
ENSHGLG00100004028	-	84	86.364	ENSFCAG00000033787	-	66	80.519	Felis_catus
ENSHGLG00100004028	-	87	100.000	ENSFDAG00000016118	MSI2	52	100.000	Fukomys_damarensis
ENSHGLG00100004028	-	87	96.491	ENSFHEG00000000084	msi2a	72	96.491	Fundulus_heteroclitus
ENSHGLG00100004028	-	63	96.341	ENSGMOG00000007596	-	79	96.341	Gadus_morhua
ENSHGLG00100004028	-	87	96.491	ENSGAFG00000006974	msi2a	68	96.491	Gambusia_affinis
ENSHGLG00100004028	-	87	100.000	ENSGGOG00000013182	MSI2	67	100.000	Gorilla_gorilla
ENSHGLG00100004028	-	94	91.057	ENSHBUG00000020800	msi2a	65	91.057	Haplochromis_burtoni
ENSHGLG00100004028	-	63	100.000	ENSHGLG00000012444	MSI2	60	100.000	Heterocephalus_glaber_female
ENSHGLG00100004028	-	87	96.491	ENSIPUG00000021097	msi2a	55	96.491	Ictalurus_punctatus
ENSHGLG00100004028	-	87	85.556	ENSSTOG00000007884	MSI2	51	85.556	Ictidomys_tridecemlineatus
ENSHGLG00100004028	-	86	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSHGLG00100004028	-	87	95.614	ENSKMAG00000009494	msi2a	51	95.614	Kryptolebias_marmoratus
ENSHGLG00100004028	-	87	96.491	ENSLBEG00000007061	msi2a	74	96.460	Labrus_bergylta
ENSHGLG00100004028	-	63	96.386	ENSLACG00000016798	MSI2	82	96.386	Latimeria_chalumnae
ENSHGLG00100004028	-	87	98.246	ENSLOCG00000004675	msi2b	82	85.149	Lepisosteus_oculatus
ENSHGLG00100004028	-	87	100.000	ENSMFAG00000003775	MSI2	67	100.000	Macaca_fascicularis
ENSHGLG00100004028	-	87	100.000	ENSMMUG00000002069	MSI2	67	100.000	Macaca_mulatta
ENSHGLG00100004028	-	87	100.000	ENSMNEG00000045275	MSI2	67	100.000	Macaca_nemestrina
ENSHGLG00100004028	-	87	100.000	ENSMLEG00000033888	MSI2	67	100.000	Mandrillus_leucophaeus
ENSHGLG00100004028	-	87	95.614	ENSMAMG00000002488	-	75	95.614	Mastacembelus_armatus
ENSHGLG00100004028	-	87	96.491	ENSMAMG00000010503	msi2a	69	96.460	Mastacembelus_armatus
ENSHGLG00100004028	-	87	96.491	ENSMZEG00005007676	msi2a	55	96.491	Maylandia_zebra
ENSHGLG00100004028	-	87	86.842	ENSMICG00000032913	-	55	86.842	Microcebus_murinus
ENSHGLG00100004028	-	87	100.000	ENSMICG00000013598	-	67	100.000	Microcebus_murinus
ENSHGLG00100004028	-	87	94.737	ENSMMOG00000008348	msi2a	83	88.288	Mola_mola
ENSHGLG00100004028	-	87	96.491	ENSMALG00000000071	msi2a	70	92.437	Monopterus_albus
ENSHGLG00100004028	-	87	100.000	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSHGLG00100004028	-	87	100.000	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSHGLG00100004028	-	87	100.000	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSHGLG00100004028	-	87	100.000	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSHGLG00100004028	-	87	100.000	ENSMPUG00000015377	MSI2	52	100.000	Mustela_putorius_furo
ENSHGLG00100004028	-	87	99.123	ENSMLUG00000007865	MSI2	52	99.123	Myotis_lucifugus
ENSHGLG00100004028	-	87	96.491	ENSNBRG00000014596	msi2a	78	96.491	Neolamprologus_brichardi
ENSHGLG00100004028	-	88	99.020	ENSNLEG00000008059	MSI2	70	99.020	Nomascus_leucogenys
ENSHGLG00100004028	-	87	96.491	ENSONIG00000001972	msi2a	63	96.491	Oreochromis_niloticus
ENSHGLG00100004028	-	87	100.000	ENSOCUG00000010440	MSI2	52	100.000	Oryctolagus_cuniculus
ENSHGLG00100004028	-	87	96.491	ENSORLG00000009671	msi2a	55	96.491	Oryzias_latipes
ENSHGLG00100004028	-	87	96.491	ENSORLG00020021556	msi2a	55	96.491	Oryzias_latipes_hni
ENSHGLG00100004028	-	87	96.491	ENSORLG00015004592	msi2a	55	96.491	Oryzias_latipes_hsok
ENSHGLG00100004028	-	87	96.491	ENSOMEG00000000146	msi2a	55	96.491	Oryzias_melastigma
ENSHGLG00100004028	-	87	100.000	ENSPPAG00000037697	MSI2	67	100.000	Pan_paniscus
ENSHGLG00100004028	-	87	100.000	ENSPPRG00000001848	MSI2	67	100.000	Panthera_pardus
ENSHGLG00100004028	-	88	99.020	ENSPTIG00000021678	MSI2	62	99.020	Panthera_tigris_altaica
ENSHGLG00100004028	-	88	78.378	ENSPTIG00000021873	-	72	78.378	Panthera_tigris_altaica
ENSHGLG00100004028	-	87	100.000	ENSPTRG00000009437	MSI2	67	100.000	Pan_troglodytes
ENSHGLG00100004028	-	87	100.000	ENSPANG00000022319	MSI2	67	100.000	Papio_anubis
ENSHGLG00100004028	-	87	95.614	ENSPKIG00000007038	-	63	95.614	Paramormyrops_kingsleyae
ENSHGLG00100004028	-	53	95.652	ENSPKIG00000017107	-	61	95.652	Paramormyrops_kingsleyae
ENSHGLG00100004028	-	87	88.288	ENSPMGG00000005888	msi2a	53	88.288	Periophthalmus_magnuspinnatus
ENSHGLG00100004028	-	86	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSHGLG00100004028	-	63	93.976	ENSPFOG00000019337	MSI2	72	93.976	Poecilia_formosa
ENSHGLG00100004028	-	93	90.984	ENSPLAG00000000436	msi2a	65	90.984	Poecilia_latipinna
ENSHGLG00100004028	-	91	83.193	ENSPMEG00000013247	msi2a	74	83.193	Poecilia_mexicana
ENSHGLG00100004028	-	87	96.491	ENSPREG00000000881	msi2a	52	88.288	Poecilia_reticulata
ENSHGLG00100004028	-	87	100.000	ENSPCOG00000019195	-	78	100.000	Propithecus_coquereli
ENSHGLG00100004028	-	87	100.000	ENSPVAG00000017053	MSI2	53	100.000	Pteropus_vampyrus
ENSHGLG00100004028	-	87	96.491	ENSPNYG00000018393	msi2a	55	96.491	Pundamilia_nyererei
ENSHGLG00100004028	-	87	97.368	ENSPNAG00000014957	msi2a	51	97.368	Pygocentrus_nattereri
ENSHGLG00100004028	-	87	100.000	ENSRNOG00000025338	Msi2	50	100.000	Rattus_norvegicus
ENSHGLG00100004028	-	86	100.000	ENSRROG00000034421	-	86	100.000	Rhinopithecus_roxellana
ENSHGLG00100004028	-	87	100.000	ENSSBOG00000026425	MSI2	67	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00100004028	-	87	99.123	ENSSHAG00000008672	MSI2	52	99.123	Sarcophilus_harrisii
ENSHGLG00100004028	-	87	92.105	ENSSFOG00015021687	-	60	92.105	Scleropages_formosus
ENSHGLG00100004028	-	87	96.491	ENSSMAG00000018484	msi2a	55	96.491	Scophthalmus_maximus
ENSHGLG00100004028	-	87	94.737	ENSSDUG00000021968	-	75	94.737	Seriola_dumerili
ENSHGLG00100004028	-	87	96.491	ENSSDUG00000014507	msi2a	68	96.460	Seriola_dumerili
ENSHGLG00100004028	-	87	96.491	ENSSLDG00000017172	msi2a	55	96.491	Seriola_lalandi_dorsalis
ENSHGLG00100004028	-	87	98.246	ENSSPUG00000000913	-	81	98.246	Sphenodon_punctatus
ENSHGLG00100004028	-	87	96.491	ENSSPAG00000017793	msi2a	55	96.491	Stegastes_partitus
ENSHGLG00100004028	-	87	100.000	ENSSSCG00000038505	MSI2	55	100.000	Sus_scrofa
ENSHGLG00100004028	-	86	84.071	ENSTBEG00000001241	MSI2	51	84.071	Tupaia_belangeri
ENSHGLG00100004028	-	87	100.000	ENSUAMG00000000700	MSI2	67	100.000	Ursus_americanus
ENSHGLG00100004028	-	87	100.000	ENSUMAG00000000505	MSI2	54	100.000	Ursus_maritimus
ENSHGLG00100004028	-	87	96.491	ENSXMAG00000000608	msi2a	55	96.491	Xiphophorus_maculatus