EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 645 bases
Position: chrJH173192.1:383831-384475
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005508	LSM	PF01423.22	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005590	-	615	-	ENSHGLP00100005508	204 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004178	-	79	83.636	ENSHGLG00100021056	-	70	83.636
ENSHGLG00100004178	-	79	84.524	ENSHGLG00100016559	SNRPN	63	87.333
ENSHGLG00100004178	-	72	71.333	ENSHGLG00100004881	-	61	71.333
ENSHGLG00100004178	-	72	90.000	ENSHGLG00100012877	-	65	90.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004178	-	72	90.000	ENSG00000125835	SNRPB	74	92.308	Homo_sapiens
ENSHGLG00100004178	-	84	81.714	ENSAPOG00000019606	snrpb	51	86.000	Acanthochromis_polyacanthus
ENSHGLG00100004178	-	71	90.541	ENSAMEG00000011353	SNRPB	61	90.541	Ailuropoda_melanoleuca
ENSHGLG00100004178	-	81	81.657	ENSACIG00000014480	snrpb	64	86.111	Amphilophus_citrinellus
ENSHGLG00100004178	-	84	81.714	ENSAOCG00000006876	snrpb	63	86.000	Amphiprion_ocellaris
ENSHGLG00100004178	-	84	81.714	ENSAPEG00000021585	snrpb	64	86.000	Amphiprion_percula
ENSHGLG00100004178	-	84	81.714	ENSATEG00000009836	snrpb	63	86.000	Anabas_testudineus
ENSHGLG00100004178	-	68	85.915	ENSACAG00000002053	SNRPB	61	85.915	Anolis_carolinensis
ENSHGLG00100004178	-	79	83.333	ENSANAG00000036271	-	60	84.667	Aotus_nancymaae
ENSHGLG00100004178	-	72	90.000	ENSANAG00000024443	-	65	90.000	Aotus_nancymaae
ENSHGLG00100004178	-	84	81.714	ENSACLG00000014707	snrpb	63	86.000	Astatotilapia_calliptera
ENSHGLG00100004178	-	72	85.333	ENSAMXG00000029434	snrpb	63	85.333	Astyanax_mexicanus
ENSHGLG00100004178	-	90	84.127	ENSBTAG00000001038	SNRPB	65	90.000	Bos_taurus
ENSHGLG00100004178	-	71	86.486	ENSCJAG00000023097	-	63	86.000	Callithrix_jacchus
ENSHGLG00100004178	-	72	90.000	ENSCJAG00000020971	-	65	90.000	Callithrix_jacchus
ENSHGLG00100004178	-	72	90.000	ENSCAFG00000006693	-	65	90.000	Canis_familiaris
ENSHGLG00100004178	-	69	79.310	ENSCAFG00000031109	-	62	78.667	Canis_familiaris
ENSHGLG00100004178	-	72	90.000	ENSCAFG00020016981	-	63	90.000	Canis_lupus_dingo
ENSHGLG00100004178	-	72	90.000	ENSCHIG00000025449	-	65	90.000	Capra_hircus
ENSHGLG00100004178	-	86	70.391	ENSTSYG00000032303	-	60	70.909	Carlito_syrichta
ENSHGLG00100004178	-	72	90.000	ENSTSYG00000014498	-	65	90.000	Carlito_syrichta
ENSHGLG00100004178	-	71	90.541	ENSCAPG00000012669	SNRPB	64	90.541	Cavia_aperea
ENSHGLG00100004178	-	72	90.000	ENSCPOG00000039408	SNRPB	65	90.000	Cavia_porcellus
ENSHGLG00100004178	-	61	81.452	ENSCCAG00000035140	-	88	82.000	Cebus_capucinus
ENSHGLG00100004178	-	72	90.000	ENSCCAG00000026002	SNRPB	65	90.000	Cebus_capucinus
ENSHGLG00100004178	-	72	90.000	ENSCATG00000030230	SNRPB	65	90.000	Cercocebus_atys
ENSHGLG00100004178	-	72	90.000	ENSCLAG00000012442	SNRPB	63	90.000	Chinchilla_lanigera
ENSHGLG00100004178	-	72	90.000	ENSCSAG00000010840	SNRPB	65	90.000	Chlorocebus_sabaeus
ENSHGLG00100004178	-	72	86.667	ENSCPBG00000026801	SNRPB	65	86.667	Chrysemys_picta_bellii
ENSHGLG00100004178	-	72	90.000	ENSCANG00000019461	SNRPB	65	90.000	Colobus_angolensis_palliatus
ENSHGLG00100004178	-	72	90.000	ENSCGRG00001023046	Snrpb	65	90.000	Cricetulus_griseus_chok1gshd
ENSHGLG00100004178	-	70	90.345	ENSCGRG00000010423	Snrpb	63	90.141	Cricetulus_griseus_crigri
ENSHGLG00100004178	-	86	81.111	ENSCSEG00000020328	snrpb	63	86.000	Cynoglossus_semilaevis
ENSHGLG00100004178	-	72	86.000	ENSDARG00000011125	snrpb	63	86.000	Danio_rerio
ENSHGLG00100004178	-	72	84.667	ENSDNOG00000007896	-	62	84.667	Dasypus_novemcinctus
ENSHGLG00100004178	-	72	90.000	ENSDNOG00000015545	-	63	90.000	Dasypus_novemcinctus
ENSHGLG00100004178	-	69	90.278	ENSDORG00000029558	Snrpb	63	90.278	Dipodomys_ordii
ENSHGLG00100004178	-	72	63.265	FBgn0262601	SmB	74	63.265	Drosophila_melanogaster
ENSHGLG00100004178	-	86	71.429	ENSEBUG00000007467	SNRPB	62	81.081	Eptatretus_burgeri
ENSHGLG00100004178	-	72	89.333	ENSEASG00005012991	SNRPB	65	89.333	Equus_asinus_asinus
ENSHGLG00100004178	-	72	90.000	ENSECAG00000011944	SNRPB	65	90.000	Equus_caballus
ENSHGLG00100004178	-	72	90.000	ENSEEUG00000015568	SNRPB	53	90.000	Erinaceus_europaeus
ENSHGLG00100004178	-	70	85.517	ENSELUG00000014564	snrpb	64	86.111	Esox_lucius
ENSHGLG00100004178	-	72	90.000	ENSFCAG00000034090	-	65	90.000	Felis_catus
ENSHGLG00100004178	-	68	86.620	ENSFALG00000004866	SNRPB	61	86.620	Ficedula_albicollis
ENSHGLG00100004178	-	72	90.000	ENSFDAG00000009937	SNRPB	65	90.000	Fukomys_damarensis
ENSHGLG00100004178	-	72	86.667	ENSGALG00000035421	SNRPN	63	86.667	Gallus_gallus
ENSHGLG00100004178	-	81	81.657	ENSGAFG00000019558	snrpb	65	85.811	Gambusia_affinis
ENSHGLG00100004178	-	86	80.000	ENSGACG00000003262	snrpb	63	86.000	Gasterosteus_aculeatus
ENSHGLG00100004178	-	72	86.667	ENSGAGG00000001308	SNRPB	63	86.667	Gopherus_agassizii
ENSHGLG00100004178	-	72	90.000	ENSGGOG00000016138	SNRPB	65	90.000	Gorilla_gorilla
ENSHGLG00100004178	-	84	81.714	ENSHBUG00000008369	snrpb	63	86.000	Haplochromis_burtoni
ENSHGLG00100004178	-	72	90.000	ENSHGLG00000016241	-	65	90.000	Heterocephalus_glaber_female
ENSHGLG00100004178	-	100	100.000	ENSHGLG00000016505	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100004178	-	86	81.111	ENSHCOG00000014888	snrpb	63	86.000	Hippocampus_comes
ENSHGLG00100004178	-	72	86.000	ENSIPUG00000024569	SNRPB	63	86.000	Ictalurus_punctatus
ENSHGLG00100004178	-	72	88.667	ENSSTOG00000033664	-	63	88.667	Ictidomys_tridecemlineatus
ENSHGLG00100004178	-	70	84.932	ENSSTOG00000027821	-	62	89.706	Ictidomys_tridecemlineatus
ENSHGLG00100004178	-	72	90.000	ENSJJAG00000024170	Snrpb	65	90.000	Jaculus_jaculus
ENSHGLG00100004178	-	82	82.456	ENSKMAG00000014494	snrpb	61	86.667	Kryptolebias_marmoratus
ENSHGLG00100004178	-	86	81.111	ENSLBEG00000005678	snrpb	63	86.000	Labrus_bergylta
ENSHGLG00100004178	-	86	79.121	ENSLACG00000011459	SNRPB	63	84.667	Latimeria_chalumnae
ENSHGLG00100004178	-	72	86.667	ENSLOCG00000002687	snrpb	63	86.667	Lepisosteus_oculatus
ENSHGLG00100004178	-	71	85.811	ENSLAFG00000017588	SNRPB	63	85.811	Loxodonta_africana
ENSHGLG00100004178	-	72	90.000	ENSMFAG00000038756	SNRPB	65	90.000	Macaca_fascicularis
ENSHGLG00100004178	-	72	90.000	ENSMMUG00000010050	SNRPB	65	90.000	Macaca_mulatta
ENSHGLG00100004178	-	72	90.000	ENSMNEG00000027954	SNRPB	65	90.000	Macaca_nemestrina
ENSHGLG00100004178	-	72	90.000	ENSMLEG00000022346	SNRPB	65	90.000	Mandrillus_leucophaeus
ENSHGLG00100004178	-	83	82.081	ENSMAMG00000009294	snrpb	60	86.486	Mastacembelus_armatus
ENSHGLG00100004178	-	84	81.714	ENSMZEG00005011856	snrpb	63	86.000	Maylandia_zebra
ENSHGLG00100004178	-	72	90.000	ENSMICG00000016519	SNRPB	65	90.000	Microcebus_murinus
ENSHGLG00100004178	-	85	82.222	ENSMICG00000015983	-	69	84.000	Microcebus_murinus
ENSHGLG00100004178	-	67	76.978	ENSMOCG00000021362	-	58	71.942	Microtus_ochrogaster
ENSHGLG00100004178	-	72	90.000	ENSMOCG00000002892	-	65	90.000	Microtus_ochrogaster
ENSHGLG00100004178	-	85	81.461	ENSMMOG00000013226	snrpb	64	86.486	Mola_mola
ENSHGLG00100004178	-	84	81.143	ENSMALG00000020839	snrpb	51	85.333	Monopterus_albus
ENSHGLG00100004178	-	72	90.000	MGP_CAROLIEiJ_G0024293	Snrpb	74	92.308	Mus_caroli
ENSHGLG00100004178	-	72	90.000	ENSMUSG00000027404	Snrpb	74	92.308	Mus_musculus
ENSHGLG00100004178	-	72	90.000	MGP_PahariEiJ_G0025738	Snrpb	74	92.308	Mus_pahari
ENSHGLG00100004178	-	72	90.000	MGP_SPRETEiJ_G0025213	Snrpb	83	83.051	Mus_spretus
ENSHGLG00100004178	-	72	90.000	ENSMPUG00000009283	SNRPB	65	90.000	Mustela_putorius_furo
ENSHGLG00100004178	-	72	87.333	ENSMLUG00000016951	SNRPB	62	87.333	Myotis_lucifugus
ENSHGLG00100004178	-	72	90.000	ENSNGAG00000012051	Snrpb	65	90.000	Nannospalax_galili
ENSHGLG00100004178	-	84	79.429	ENSNBRG00000006353	snrpb	56	84.932	Neolamprologus_brichardi
ENSHGLG00100004178	-	72	90.000	ENSNLEG00000029067	SNRPB	63	90.000	Nomascus_leucogenys
ENSHGLG00100004178	-	71	89.189	ENSMEUG00000015625	SNRPB	66	89.189	Notamacropus_eugenii
ENSHGLG00100004178	-	72	90.000	ENSODEG00000004305	-	65	90.000	Octodon_degus
ENSHGLG00100004178	-	72	83.333	ENSODEG00000016060	-	62	85.333	Octodon_degus
ENSHGLG00100004178	-	84	81.714	ENSONIG00000000248	snrpb	63	86.000	Oreochromis_niloticus
ENSHGLG00100004178	-	72	86.000	ENSOCUG00000021456	-	62	86.000	Oryctolagus_cuniculus
ENSHGLG00100004178	-	86	80.220	ENSOCUG00000022423	-	77	88.000	Oryctolagus_cuniculus
ENSHGLG00100004178	-	72	87.333	ENSOCUG00000028215	-	63	87.333	Oryctolagus_cuniculus
ENSHGLG00100004178	-	72	90.000	ENSOCUG00000014042	-	63	90.000	Oryctolagus_cuniculus
ENSHGLG00100004178	-	93	60.591	ENSOCUG00000026813	-	64	65.772	Oryctolagus_cuniculus
ENSHGLG00100004178	-	86	80.447	ENSORLG00000021862	snrpb	63	86.000	Oryzias_latipes
ENSHGLG00100004178	-	72	90.000	ENSOGAG00000016149	SNRPB	63	90.000	Otolemur_garnettii
ENSHGLG00100004178	-	72	90.000	ENSOARG00000006740	SNRPB	65	90.000	Ovis_aries
ENSHGLG00100004178	-	72	90.000	ENSPPAG00000036314	SNRPB	65	90.000	Pan_paniscus
ENSHGLG00100004178	-	72	90.000	ENSPPRG00000003233	-	65	90.000	Panthera_pardus
ENSHGLG00100004178	-	71	90.541	ENSPTIG00000007468	SNRPB	64	90.541	Panthera_tigris_altaica
ENSHGLG00100004178	-	72	90.000	ENSPTRG00000013176	SNRPB	65	90.000	Pan_troglodytes
ENSHGLG00100004178	-	72	90.000	ENSPANG00000020362	SNRPB	63	90.000	Papio_anubis
ENSHGLG00100004178	-	72	86.000	ENSPKIG00000002865	snrpb	63	86.000	Paramormyrops_kingsleyae
ENSHGLG00100004178	-	71	87.162	ENSPSIG00000014125	SNRPB	61	87.162	Pelodiscus_sinensis
ENSHGLG00100004178	-	84	76.000	ENSPMGG00000016349	snrpb	62	84.828	Periophthalmus_magnuspinnatus
ENSHGLG00100004178	-	72	90.000	ENSPEMG00000007948	Snrpb	65	90.000	Peromyscus_maniculatus_bairdii
ENSHGLG00100004178	-	71	89.189	ENSPCIG00000004694	SNRPB	61	89.189	Phascolarctos_cinereus
ENSHGLG00100004178	-	71	86.486	ENSPFOG00000011802	snrpb	63	86.486	Poecilia_formosa
ENSHGLG00100004178	-	69	81.944	ENSPLAG00000014130	snrpb	63	81.944	Poecilia_latipinna
ENSHGLG00100004178	-	65	85.926	ENSPREG00000015515	snrpb	62	85.926	Poecilia_reticulata
ENSHGLG00100004178	-	72	90.000	ENSPPYG00000010841	SNRPB	65	90.000	Pongo_abelii
ENSHGLG00100004178	-	72	90.000	ENSPCOG00000013686	SNRPB	65	90.000	Propithecus_coquereli
ENSHGLG00100004178	-	72	88.667	ENSPVAG00000017013	SNRPB	52	88.667	Pteropus_vampyrus
ENSHGLG00100004178	-	84	81.714	ENSPNYG00000014788	snrpb	63	86.000	Pundamilia_nyererei
ENSHGLG00100004178	-	72	86.000	ENSPNAG00000016126	snrpb	63	86.000	Pygocentrus_nattereri
ENSHGLG00100004178	-	72	90.000	ENSRNOG00000006961	Snrpb	76	88.889	Rattus_norvegicus
ENSHGLG00100004178	-	72	90.000	ENSRBIG00000040505	SNRPB	65	90.000	Rhinopithecus_bieti
ENSHGLG00100004178	-	72	90.000	ENSRROG00000036094	SNRPB	65	90.000	Rhinopithecus_roxellana
ENSHGLG00100004178	-	72	90.000	ENSSBOG00000027310	SNRPB	65	90.000	Saimiri_boliviensis_boliviensis
ENSHGLG00100004178	-	72	89.333	ENSSHAG00000010394	SNRPB	63	89.333	Sarcophilus_harrisii
ENSHGLG00100004178	-	72	85.333	ENSSFOG00015002870	snrpb	63	85.333	Scleropages_formosus
ENSHGLG00100004178	-	86	81.111	ENSSMAG00000006766	snrpb	63	86.000	Scophthalmus_maximus
ENSHGLG00100004178	-	84	81.714	ENSSDUG00000018539	snrpb	63	86.000	Seriola_dumerili
ENSHGLG00100004178	-	84	81.714	ENSSLDG00000022391	snrpb	63	86.000	Seriola_lalandi_dorsalis
ENSHGLG00100004178	-	71	75.000	ENSSARG00000003084	SNRPB	63	75.000	Sorex_araneus
ENSHGLG00100004178	-	71	87.162	ENSSPUG00000015659	SNRPB	62	87.162	Sphenodon_punctatus
ENSHGLG00100004178	-	84	81.714	ENSSPAG00000021992	snrpb	63	86.000	Stegastes_partitus
ENSHGLG00100004178	-	72	90.000	ENSSSCG00000040857	-	65	90.000	Sus_scrofa
ENSHGLG00100004178	-	72	68.000	ENSSSCG00000011966	-	60	68.919	Sus_scrofa
ENSHGLG00100004178	-	67	87.050	ENSTGUG00000005684	SNRPB	58	87.050	Taeniopygia_guttata
ENSHGLG00100004178	-	86	81.667	ENSTRUG00000023094	snrpb	66	86.000	Takifugu_rubripes
ENSHGLG00100004178	-	86	81.667	ENSTNIG00000002991	snrpb	63	86.000	Tetraodon_nigroviridis
ENSHGLG00100004178	-	72	90.000	ENSUAMG00000005984	-	72	90.000	Ursus_americanus
ENSHGLG00100004178	-	75	83.333	ENSUMAG00000002123	-	67	86.986	Ursus_maritimus
ENSHGLG00100004178	-	72	89.333	ENSVVUG00000025654	-	63	89.333	Vulpes_vulpes
ENSHGLG00100004178	-	86	72.067	ENSVVUG00000010086	-	62	76.190	Vulpes_vulpes
ENSHGLG00100004178	-	72	86.667	ENSXETG00000027266	snrpb	63	86.667	Xenopus_tropicalis
ENSHGLG00100004178	-	81	71.930	ENSXMAG00000028767	snrpb	58	85.926	Xiphophorus_maculatus