EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 153017 bases
Position: chrJH169806.1:746288-899304
Accession: 101718968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005520	R3H	PF01424.22	2.4e-10	1	1
ENSHGLP00100005518	R3H	PF01424.22	2.5e-10	1	1
ENSHGLP00100005521	R3H	PF01424.22	2.5e-10	1	1
ENSHGLP00100005519	R3H	PF01424.22	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005599	-	3939	XM_021241511	ENSHGLP00100005517	27 (aa)	XP_021097170	UPI0001F79449
ENSHGLT00100005603	-	2976	XM_021241513	ENSHGLP00100005521	991 (aa)	XP_021097172	-
ENSHGLT00100005602	-	3036	XM_004861239	ENSHGLP00100005520	1011 (aa)	XP_004861296	-
ENSHGLT00100005601	-	3078	XM_004861237	ENSHGLP00100005519	1025 (aa)	XP_004861294	-
ENSHGLT00100005600	-	3132	-	ENSHGLP00100005518	1043 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004183	-	96	86.792	ENSHGLG00100018871	-	99	86.792
ENSHGLG00100004183	-	95	59.024	ENSHGLG00100003184	-	80	69.231
ENSHGLG00100004183	-	83	51.799	ENSHGLG00100015374	-	93	39.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004183	-	100	95.766	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSHGLG00100004183	-	99	65.743	ENSAPOG00000020341	r3hdm2	96	67.915	Acanthochromis_polyacanthus
ENSHGLG00100004183	-	62	36.107	ENSAPOG00000021873	-	87	35.451	Acanthochromis_polyacanthus
ENSHGLG00100004183	-	100	93.696	ENSAMEG00000004812	R3HDM2	100	94.078	Ailuropoda_melanoleuca
ENSHGLG00100004183	-	93	65.576	ENSACIG00000016146	r3hdm2	98	65.576	Amphilophus_citrinellus
ENSHGLG00100004183	-	99	65.651	ENSAOCG00000023694	r3hdm2	95	67.919	Amphiprion_ocellaris
ENSHGLG00100004183	-	64	37.752	ENSAOCG00000003840	-	90	35.493	Amphiprion_ocellaris
ENSHGLG00100004183	-	99	65.540	ENSAPEG00000008851	r3hdm2	99	67.913	Amphiprion_percula
ENSHGLG00100004183	-	62	37.926	ENSAPEG00000014325	-	87	35.830	Amphiprion_percula
ENSHGLG00100004183	-	99	64.231	ENSATEG00000025024	r3hdm2	100	68.553	Anabas_testudineus
ENSHGLG00100004183	-	100	87.961	ENSAPLG00000004298	R3HDM2	94	84.108	Anas_platyrhynchos
ENSHGLG00100004183	-	100	81.569	ENSACAG00000006388	R3HDM2	100	81.978	Anolis_carolinensis
ENSHGLG00100004183	-	100	95.262	ENSANAG00000025397	-	100	95.262	Aotus_nancymaae
ENSHGLG00100004183	-	98	90.741	ENSANAG00000031310	-	100	90.741	Aotus_nancymaae
ENSHGLG00100004183	-	99	65.078	ENSACLG00000019106	r3hdm2	95	68.304	Astatotilapia_calliptera
ENSHGLG00100004183	-	94	59.772	ENSAMXG00000017180	r3hdm2	99	60.550	Astyanax_mexicanus
ENSHGLG00100004183	-	100	94.657	ENSBTAG00000018361	R3HDM2	100	94.657	Bos_taurus
ENSHGLG00100004183	-	100	94.763	ENSCJAG00000007365	R3HDM2	100	94.763	Callithrix_jacchus
ENSHGLG00100004183	-	100	94.171	ENSCAFG00000000215	R3HDM2	100	94.368	Canis_familiaris
ENSHGLG00100004183	-	100	93.347	ENSCAFG00020023713	R3HDM2	100	94.153	Canis_lupus_dingo
ENSHGLG00100004183	-	100	94.254	ENSCHIG00000014022	R3HDM2	100	94.254	Capra_hircus
ENSHGLG00100004183	-	100	92.885	ENSTSYG00000001449	R3HDM2	100	93.775	Carlito_syrichta
ENSHGLG00100004183	-	100	95.565	ENSCPOG00000009217	R3HDM2	100	95.565	Cavia_porcellus
ENSHGLG00100004183	-	89	94.772	ENSCCAG00000026083	R3HDM2	100	94.767	Cebus_capucinus
ENSHGLG00100004183	-	100	95.464	ENSCATG00000036929	R3HDM2	100	95.464	Cercocebus_atys
ENSHGLG00100004183	-	100	96.777	ENSCLAG00000011997	R3HDM2	100	96.777	Chinchilla_lanigera
ENSHGLG00100004183	-	100	95.428	ENSCSAG00000004911	R3HDM2	100	95.428	Chlorocebus_sabaeus
ENSHGLG00100004183	-	76	90.239	ENSCHOG00000005636	R3HDM2	91	91.036	Choloepus_hoffmanni
ENSHGLG00100004183	-	100	79.330	ENSCPBG00000013922	R3HDM2	100	79.628	Chrysemys_picta_bellii
ENSHGLG00100004183	-	100	95.161	ENSCANG00000043807	R3HDM2	100	95.161	Colobus_angolensis_palliatus
ENSHGLG00100004183	-	100	92.951	ENSCGRG00001017324	R3hdm2	100	92.951	Cricetulus_griseus_chok1gshd
ENSHGLG00100004183	-	100	92.440	ENSCGRG00000003862	R3hdm2	100	92.440	Cricetulus_griseus_crigri
ENSHGLG00100004183	-	97	65.945	ENSCSEG00000010925	r3hdm2	100	64.626	Cynoglossus_semilaevis
ENSHGLG00100004183	-	99	63.918	ENSCVAG00000009058	r3hdm2	99	65.287	Cyprinodon_variegatus
ENSHGLG00100004183	-	93	63.974	ENSDARG00000102610	r3hdm2	99	64.831	Danio_rerio
ENSHGLG00100004183	-	100	93.901	ENSDNOG00000015033	R3HDM2	100	94.322	Dasypus_novemcinctus
ENSHGLG00100004183	-	94	91.423	ENSDORG00000011462	R3hdm2	99	91.423	Dipodomys_ordii
ENSHGLG00100004183	-	100	94.923	ENSEASG00005007091	R3HDM2	100	94.923	Equus_asinus_asinus
ENSHGLG00100004183	-	100	94.540	ENSECAG00000003157	R3HDM2	100	94.540	Equus_caballus
ENSHGLG00100004183	-	98	63.836	ENSELUG00000015969	r3hdm2	100	61.093	Esox_lucius
ENSHGLG00100004183	-	100	93.678	ENSFCAG00000000192	R3HDM2	99	94.043	Felis_catus
ENSHGLG00100004183	-	89	77.419	ENSFALG00000000255	R3HDM2	100	74.147	Ficedula_albicollis
ENSHGLG00100004183	-	100	97.230	ENSFDAG00000019385	R3HDM2	100	97.230	Fukomys_damarensis
ENSHGLG00100004183	-	62	35.503	ENSFHEG00000007936	-	76	36.607	Fundulus_heteroclitus
ENSHGLG00100004183	-	99	62.625	ENSFHEG00000016484	r3hdm2	99	64.940	Fundulus_heteroclitus
ENSHGLG00100004183	-	95	65.846	ENSGMOG00000007961	r3hdm2	95	70.577	Gadus_morhua
ENSHGLG00100004183	-	100	79.080	ENSGALG00000043736	R3HDM2	100	78.409	Gallus_gallus
ENSHGLG00100004183	-	62	36.295	ENSGAFG00000015558	-	88	34.277	Gambusia_affinis
ENSHGLG00100004183	-	99	65.093	ENSGAFG00000013887	r3hdm2	100	64.389	Gambusia_affinis
ENSHGLG00100004183	-	95	68.369	ENSGACG00000006442	r3hdm2	100	68.861	Gasterosteus_aculeatus
ENSHGLG00100004183	-	100	79.349	ENSGAGG00000017797	R3HDM2	100	79.277	Gopherus_agassizii
ENSHGLG00100004183	-	100	95.665	ENSGGOG00000015007	R3HDM2	100	95.665	Gorilla_gorilla
ENSHGLG00100004183	-	88	90.525	ENSHGLG00000010421	-	97	90.525	Heterocephalus_glaber_female
ENSHGLG00100004183	-	100	99.904	ENSHGLG00000010434	-	100	99.904	Heterocephalus_glaber_female
ENSHGLG00100004183	-	99	64.198	ENSHCOG00000001142	r3hdm2	92	66.934	Hippocampus_comes
ENSHGLG00100004183	-	99	62.335	ENSIPUG00000023873	r3hdm2	99	63.321	Ictalurus_punctatus
ENSHGLG00100004183	-	100	90.534	ENSSTOG00000013424	R3HDM2	100	91.440	Ictidomys_tridecemlineatus
ENSHGLG00100004183	-	100	94.444	ENSJJAG00000010001	R3hdm2	100	94.732	Jaculus_jaculus
ENSHGLG00100004183	-	99	64.787	ENSKMAG00000012695	r3hdm2	99	67.511	Kryptolebias_marmoratus
ENSHGLG00100004183	-	99	65.217	ENSLBEG00000013115	r3hdm2	92	67.147	Labrus_bergylta
ENSHGLG00100004183	-	95	72.028	ENSLACG00000019064	r3hdm2	100	72.189	Latimeria_chalumnae
ENSHGLG00100004183	-	100	70.501	ENSLOCG00000005976	r3hdm2	100	71.260	Lepisosteus_oculatus
ENSHGLG00100004183	-	100	93.199	ENSLAFG00000006510	R3HDM2	100	93.199	Loxodonta_africana
ENSHGLG00100004183	-	100	95.565	ENSMFAG00000036385	R3HDM2	100	95.565	Macaca_fascicularis
ENSHGLG00100004183	-	100	95.690	ENSMMUG00000021789	R3HDM2	100	95.690	Macaca_mulatta
ENSHGLG00100004183	-	100	95.565	ENSMNEG00000025314	R3HDM2	100	95.565	Macaca_nemestrina
ENSHGLG00100004183	-	100	95.464	ENSMLEG00000028915	R3HDM2	100	95.464	Mandrillus_leucophaeus
ENSHGLG00100004183	-	99	64.673	ENSMAMG00000009793	r3hdm2	99	65.314	Mastacembelus_armatus
ENSHGLG00100004183	-	99	65.078	ENSMZEG00005007319	r3hdm2	95	68.304	Maylandia_zebra
ENSHGLG00100004183	-	100	94.975	ENSMICG00000012389	R3HDM2	100	94.975	Microcebus_murinus
ENSHGLG00100004183	-	100	93.199	ENSMOCG00000014425	R3hdm2	100	93.199	Microtus_ochrogaster
ENSHGLG00100004183	-	95	65.933	ENSMMOG00000007448	r3hdm2	99	65.582	Mola_mola
ENSHGLG00100004183	-	84	76.190	ENSMALG00000010211	r3hdm2	98	59.617	Monopterus_albus
ENSHGLG00100004183	-	100	93.971	MGP_CAROLIEiJ_G0015896	R3hdm2	100	93.971	Mus_caroli
ENSHGLG00100004183	-	100	94.061	ENSMUSG00000025404	R3hdm2	100	94.061	Mus_musculus
ENSHGLG00100004183	-	100	93.678	MGP_PahariEiJ_G0031189	R3hdm2	100	93.966	Mus_pahari
ENSHGLG00100004183	-	100	93.690	MGP_SPRETEiJ_G0016722	R3hdm2	100	93.690	Mus_spretus
ENSHGLG00100004183	-	98	92.121	ENSMPUG00000001818	R3HDM2	97	92.899	Mustela_putorius_furo
ENSHGLG00100004183	-	100	93.966	ENSMLUG00000004980	R3HDM2	100	93.966	Myotis_lucifugus
ENSHGLG00100004183	-	100	94.923	ENSNGAG00000018800	R3hdm2	100	94.923	Nannospalax_galili
ENSHGLG00100004183	-	94	64.688	ENSNBRG00000004483	r3hdm2	99	66.283	Neolamprologus_brichardi
ENSHGLG00100004183	-	100	95.464	ENSNLEG00000017351	R3HDM2	100	95.464	Nomascus_leucogenys
ENSHGLG00100004183	-	99	80.210	ENSMEUG00000008588	R3HDM2	100	79.828	Notamacropus_eugenii
ENSHGLG00100004183	-	100	84.289	ENSOPRG00000013670	R3HDM2	100	84.289	Ochotona_princeps
ENSHGLG00100004183	-	99	66.176	ENSONIG00000005075	r3hdm2	95	69.493	Oreochromis_niloticus
ENSHGLG00100004183	-	100	93.893	ENSOCUG00000013258	R3HDM2	100	93.893	Oryctolagus_cuniculus
ENSHGLG00100004183	-	99	64.995	ENSORLG00000005502	r3hdm2	99	65.306	Oryzias_latipes
ENSHGLG00100004183	-	99	64.810	ENSORLG00020017069	r3hdm2	99	65.121	Oryzias_latipes_hni
ENSHGLG00100004183	-	99	64.903	ENSORLG00015012735	r3hdm2	99	65.213	Oryzias_latipes_hsok
ENSHGLG00100004183	-	99	60.375	ENSOMEG00000018079	r3hdm2	94	63.087	Oryzias_melastigma
ENSHGLG00100004183	-	100	94.368	ENSOGAG00000012055	R3HDM2	100	94.368	Otolemur_garnettii
ENSHGLG00100004183	-	96	81.315	ENSOGAG00000027966	-	99	80.228	Otolemur_garnettii
ENSHGLG00100004183	-	100	93.869	ENSOARG00000006929	R3HDM2	100	93.869	Ovis_aries
ENSHGLG00100004183	-	100	95.766	ENSPPAG00000034395	R3HDM2	100	95.766	Pan_paniscus
ENSHGLG00100004183	-	100	93.548	ENSPPRG00000009240	R3HDM2	100	94.355	Panthera_pardus
ENSHGLG00100004183	-	100	93.548	ENSPTIG00000008752	R3HDM2	100	94.355	Panthera_tigris_altaica
ENSHGLG00100004183	-	100	95.867	ENSPTRG00000046457	R3HDM2	100	95.867	Pan_troglodytes
ENSHGLG00100004183	-	98	94.165	ENSPANG00000024002	R3HDM2	100	94.165	Papio_anubis
ENSHGLG00100004183	-	99	66.922	ENSPKIG00000003171	r3hdm2	99	65.028	Paramormyrops_kingsleyae
ENSHGLG00100004183	-	63	72.884	ENSPSIG00000006954	R3HDM2	100	72.884	Pelodiscus_sinensis
ENSHGLG00100004183	-	93	68.730	ENSPMGG00000007061	r3hdm2	99	68.556	Periophthalmus_magnuspinnatus
ENSHGLG00100004183	-	100	92.823	ENSPEMG00000015964	R3hdm2	100	92.823	Peromyscus_maniculatus_bairdii
ENSHGLG00100004183	-	100	88.442	ENSPCIG00000023841	R3HDM2	100	88.040	Phascolarctos_cinereus
ENSHGLG00100004183	-	94	75.802	ENSPFOG00000006077	r3hdm2	94	78.134	Poecilia_formosa
ENSHGLG00100004183	-	99	64.158	ENSPLAG00000002971	r3hdm2	99	65.038	Poecilia_latipinna
ENSHGLG00100004183	-	99	64.158	ENSPMEG00000005330	r3hdm2	99	65.038	Poecilia_mexicana
ENSHGLG00100004183	-	62	35.163	ENSPMEG00000014457	-	74	38.269	Poecilia_mexicana
ENSHGLG00100004183	-	99	64.292	ENSPREG00000008424	r3hdm2	99	65.157	Poecilia_reticulata
ENSHGLG00100004183	-	98	89.102	ENSPPYG00000004685	R3HDM2	81	89.102	Pongo_abelii
ENSHGLG00100004183	-	88	92.279	ENSPCAG00000014642	R3HDM2	100	85.035	Procavia_capensis
ENSHGLG00100004183	-	100	95.060	ENSPCOG00000013201	R3HDM2	100	95.060	Propithecus_coquereli
ENSHGLG00100004183	-	100	94.444	ENSPVAG00000003967	R3HDM2	100	94.444	Pteropus_vampyrus
ENSHGLG00100004183	-	94	65.000	ENSPNYG00000013479	r3hdm2	100	66.146	Pundamilia_nyererei
ENSHGLG00100004183	-	99	63.822	ENSPNAG00000017473	r3hdm2	99	64.319	Pygocentrus_nattereri
ENSHGLG00100004183	-	100	93.206	ENSRNOG00000007801	R3hdm2	100	93.206	Rattus_norvegicus
ENSHGLG00100004183	-	100	92.589	ENSRBIG00000037403	R3HDM2	100	92.292	Rhinopithecus_bieti
ENSHGLG00100004183	-	100	95.402	ENSRROG00000022271	R3HDM2	100	95.262	Rhinopithecus_roxellana
ENSHGLG00100004183	-	100	95.262	ENSSBOG00000023547	R3HDM2	100	95.262	Saimiri_boliviensis_boliviensis
ENSHGLG00100004183	-	100	85.538	ENSSHAG00000003511	R3HDM2	99	89.002	Sarcophilus_harrisii
ENSHGLG00100004183	-	94	69.758	ENSSFOG00015011219	r3hdm2	99	68.619	Scleropages_formosus
ENSHGLG00100004183	-	99	64.711	ENSSMAG00000012073	r3hdm2	100	64.995	Scophthalmus_maximus
ENSHGLG00100004183	-	99	65.695	ENSSDUG00000019269	r3hdm2	100	65.104	Seriola_dumerili
ENSHGLG00100004183	-	99	65.926	ENSSLDG00000005252	r3hdm2	100	65.477	Seriola_lalandi_dorsalis
ENSHGLG00100004183	-	93	88.192	ENSSARG00000003958	R3HDM2	94	88.192	Sorex_araneus
ENSHGLG00100004183	-	100	77.573	ENSSPUG00000014132	R3HDM2	100	77.573	Sphenodon_punctatus
ENSHGLG00100004183	-	99	65.602	ENSSPAG00000022594	r3hdm2	100	66.596	Stegastes_partitus
ENSHGLG00100004183	-	100	94.657	ENSSSCG00000026498	R3HDM2	100	95.086	Sus_scrofa
ENSHGLG00100004183	-	73	79.531	ENSTGUG00000015881	R3HDM2	100	78.879	Taeniopygia_guttata
ENSHGLG00100004183	-	95	63.158	ENSTRUG00000015075	r3hdm2	99	64.227	Takifugu_rubripes
ENSHGLG00100004183	-	87	81.897	ENSTNIG00000007057	r3hdm2	90	79.459	Tetraodon_nigroviridis
ENSHGLG00100004183	-	81	95.699	ENSTBEG00000015967	R3HDM2	81	95.699	Tupaia_belangeri
ENSHGLG00100004183	-	96	88.462	ENSTTRG00000013082	R3HDM2	93	88.889	Tursiops_truncatus
ENSHGLG00100004183	-	100	93.957	ENSUAMG00000020913	R3HDM2	100	94.347	Ursus_americanus
ENSHGLG00100004183	-	100	88.229	ENSUMAG00000019179	R3HDM2	100	89.537	Ursus_maritimus
ENSHGLG00100004183	-	100	88.506	ENSVPAG00000008656	R3HDM2	100	88.506	Vicugna_pacos
ENSHGLG00100004183	-	98	93.366	ENSVVUG00000018014	R3HDM2	97	94.146	Vulpes_vulpes
ENSHGLG00100004183	-	100	73.175	ENSXETG00000017153	r3hdm2	100	72.545	Xenopus_tropicalis
ENSHGLG00100004183	-	86	61.056	ENSXCOG00000013882	r3hdm2	100	63.718	Xiphophorus_couchianus
ENSHGLG00100004183	-	62	36.161	ENSXMAG00000002994	-	88	34.575	Xiphophorus_maculatus
ENSHGLG00100004183	-	99	63.115	ENSXMAG00000017978	r3hdm2	100	63.942	Xiphophorus_maculatus