EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100004228 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 43671 bases
Position: chrJH172722.1:965789-1009459
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005580	RRM_5	PF13893.6	8.8e-07	1	1
ENSHGLP00100005580	RRM_1	PF00076.22	2.3e-13	1	1
ENSHGLP00100005580	SAP	PF02037.27	7.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005662	SAFB-201	2547	-	ENSHGLP00100005580	848 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004228	SAFB	77	89.401	ENSG00000160633	SAFB	100	84.783	Homo_sapiens
ENSHGLG00100004228	SAFB	70	42.419	ENSACIG00000006247	safb	99	37.084	Amphilophus_citrinellus
ENSHGLG00100004228	SAFB	87	40.594	ENSAOCG00000006308	safb	77	57.463	Amphiprion_ocellaris
ENSHGLG00100004228	SAFB	67	59.337	ENSAPLG00000005780	-	100	51.751	Anas_platyrhynchos
ENSHGLG00100004228	SAFB	66	60.106	ENSAPLG00000006355	-	65	59.965	Anas_platyrhynchos
ENSHGLG00100004228	SAFB	77	88.786	ENSANAG00000028821	SAFB	100	84.058	Aotus_nancymaae
ENSHGLG00100004228	SAFB	53	41.734	ENSACLG00000001926	safb	51	55.285	Astatotilapia_calliptera
ENSHGLG00100004228	SAFB	73	42.080	ENSAMXG00000018154	safb	63	42.810	Astyanax_mexicanus
ENSHGLG00100004228	SAFB	70	94.340	ENSCJAG00000017081	SAFB	100	94.340	Callithrix_jacchus
ENSHGLG00100004228	SAFB	77	89.555	ENSCAFG00000018803	SAFB	87	75.774	Canis_familiaris
ENSHGLG00100004228	SAFB	77	89.555	ENSCAFG00020018943	SAFB	100	75.774	Canis_lupus_dingo
ENSHGLG00100004228	SAFB	93	89.533	ENSCAPG00000012121	SAFB	100	89.533	Cavia_aperea
ENSHGLG00100004228	SAFB	100	93.720	ENSCPOG00000026322	SAFB	100	75.263	Cavia_porcellus
ENSHGLG00100004228	SAFB	77	89.110	ENSCCAG00000020193	SAFB	100	84.058	Cebus_capucinus
ENSHGLG00100004228	SAFB	77	89.247	ENSCATG00000029994	SAFB	100	84.058	Cercocebus_atys
ENSHGLG00100004228	SAFB	100	97.542	ENSCLAG00000007734	SAFB	100	80.831	Chinchilla_lanigera
ENSHGLG00100004228	SAFB	77	89.247	ENSCSAG00000009949	SAFB	100	79.211	Chlorocebus_sabaeus
ENSHGLG00100004228	SAFB	74	92.857	ENSCHOG00000003208	SAFB	87	92.857	Choloepus_hoffmanni
ENSHGLG00100004228	SAFB	88	64.878	ENSCPBG00000010936	-	86	64.878	Chrysemys_picta_bellii
ENSHGLG00100004228	SAFB	100	88.719	ENSCANG00000004774	-	100	88.602	Colobus_angolensis_palliatus
ENSHGLG00100004228	SAFB	93	35.053	ENSCSEG00000019870	safb	99	35.080	Cynoglossus_semilaevis
ENSHGLG00100004228	SAFB	71	41.946	ENSDARG00000020467	safb	60	60.000	Danio_rerio
ENSHGLG00100004228	SAFB	77	88.804	ENSDNOG00000015746	SAFB	89	79.109	Dasypus_novemcinctus
ENSHGLG00100004228	SAFB	75	91.038	ENSDORG00000016200	Safb	69	90.938	Dipodomys_ordii
ENSHGLG00100004228	SAFB	80	82.143	ENSETEG00000018679	SAFB	80	82.143	Echinops_telfairi
ENSHGLG00100004228	SAFB	77	83.792	ENSEASG00005023019	SAFB	87	92.118	Equus_asinus_asinus
ENSHGLG00100004228	SAFB	77	85.407	ENSECAG00000018659	SAFB	66	85.407	Equus_caballus
ENSHGLG00100004228	SAFB	94	43.968	ENSELUG00000022327	safb	93	46.486	Esox_lucius
ENSHGLG00100004228	SAFB	77	90.169	ENSFCAG00000011835	SAFB	100	76.013	Felis_catus
ENSHGLG00100004228	SAFB	64	57.913	ENSFALG00000013881	-	64	57.886	Ficedula_albicollis
ENSHGLG00100004228	SAFB	100	92.471	ENSFDAG00000020306	SAFB	100	92.471	Fukomys_damarensis
ENSHGLG00100004228	SAFB	99	62.844	ENSGALG00000001948	-	88	65.686	Gallus_gallus
ENSHGLG00100004228	SAFB	74	60.759	ENSGALG00000013365	-	100	51.801	Gallus_gallus
ENSHGLG00100004228	SAFB	92	70.552	ENSGAGG00000008424	-	84	70.552	Gopherus_agassizii
ENSHGLG00100004228	SAFB	100	88.957	ENSGGOG00000015109	SAFB	100	84.783	Gorilla_gorilla
ENSHGLG00100004228	SAFB	66	36.237	ENSHCOG00000001705	safb	99	33.254	Hippocampus_comes
ENSHGLG00100004228	SAFB	73	44.006	ENSIPUG00000024869	safb2	84	45.425	Ictalurus_punctatus
ENSHGLG00100004228	SAFB	100	93.103	ENSJJAG00000009021	Safb	100	70.992	Jaculus_jaculus
ENSHGLG00100004228	SAFB	70	43.350	ENSLBEG00000006015	safb	63	42.251	Labrus_bergylta
ENSHGLG00100004228	SAFB	94	50.469	ENSLACG00000018090	SAFB	88	52.273	Latimeria_chalumnae
ENSHGLG00100004228	SAFB	94	47.471	ENSLOCG00000003613	safb	86	47.164	Lepisosteus_oculatus
ENSHGLG00100004228	SAFB	77	87.786	ENSLAFG00000003840	SAFB	100	73.656	Loxodonta_africana
ENSHGLG00100004228	SAFB	77	89.110	ENSMFAG00000003885	SAFB	100	84.058	Macaca_fascicularis
ENSHGLG00100004228	SAFB	100	87.270	ENSMMUG00000017970	SAFB	100	84.058	Macaca_mulatta
ENSHGLG00100004228	SAFB	77	83.896	ENSMNEG00000035637	SAFB	88	94.624	Macaca_nemestrina
ENSHGLG00100004228	SAFB	77	81.221	ENSMLEG00000038637	SAFB	88	94.624	Mandrillus_leucophaeus
ENSHGLG00100004228	SAFB	75	40.693	ENSMZEG00005009120	safb	84	41.786	Maylandia_zebra
ENSHGLG00100004228	SAFB	70	57.143	ENSMGAG00000001101	-	100	48.850	Meleagris_gallopavo
ENSHGLG00100004228	SAFB	73	55.086	ENSMGAG00000001051	-	87	72.000	Meleagris_gallopavo
ENSHGLG00100004228	SAFB	77	75.385	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSHGLG00100004228	SAFB	77	86.022	ENSMICG00000008739	-	100	81.884	Microcebus_murinus
ENSHGLG00100004228	SAFB	75	40.661	ENSMALG00000020330	safb	84	46.012	Monopterus_albus
ENSHGLG00100004228	SAFB	100	90.338	MGP_CAROLIEiJ_G0021780	Safb	100	91.133	Mus_caroli
ENSHGLG00100004228	SAFB	100	90.338	ENSMUSG00000071054	Safb	100	91.133	Mus_musculus
ENSHGLG00100004228	SAFB	77	88.633	ENSMPUG00000006123	SAFB	94	75.080	Mustela_putorius_furo
ENSHGLG00100004228	SAFB	100	78.694	ENSMLUG00000001081	SAFB	100	74.334	Myotis_lucifugus
ENSHGLG00100004228	SAFB	98	89.264	ENSNLEG00000013551	SAFB	100	84.058	Nomascus_leucogenys
ENSHGLG00100004228	SAFB	90	76.128	ENSOCUG00000014628	SAFB	88	88.177	Oryctolagus_cuniculus
ENSHGLG00100004228	SAFB	51	41.372	ENSORLG00020000404	safb	60	40.079	Oryzias_latipes_hni
ENSHGLG00100004228	SAFB	74	87.025	ENSOGAG00000027769	SAFB	100	71.612	Otolemur_garnettii
ENSHGLG00100004228	SAFB	69	82.483	ENSOARG00000007856	-	79	83.569	Ovis_aries
ENSHGLG00100004228	SAFB	100	89.110	ENSPPAG00000035129	SAFB	100	84.783	Pan_paniscus
ENSHGLG00100004228	SAFB	77	90.169	ENSPPRG00000017197	SAFB	100	76.013	Panthera_pardus
ENSHGLG00100004228	SAFB	100	89.110	ENSPTRG00000010335	SAFB	100	84.783	Pan_troglodytes
ENSHGLG00100004228	SAFB	77	88.957	ENSPANG00000007770	SAFB	100	84.058	Papio_anubis
ENSHGLG00100004228	SAFB	73	44.068	ENSPKIG00000009902	safb	83	44.322	Paramormyrops_kingsleyae
ENSHGLG00100004228	SAFB	76	57.991	ENSPSIG00000009367	-	85	65.865	Pelodiscus_sinensis
ENSHGLG00100004228	SAFB	97	65.686	ENSPSIG00000011679	-	87	65.686	Pelodiscus_sinensis
ENSHGLG00100004228	SAFB	66	52.033	ENSPFOG00000007745	safb	78	52.846	Poecilia_formosa
ENSHGLG00100004228	SAFB	93	35.281	ENSPLAG00000001614	safb	59	37.427	Poecilia_latipinna
ENSHGLG00100004228	SAFB	66	51.220	ENSPMEG00000021023	safb	78	52.033	Poecilia_mexicana
ENSHGLG00100004228	SAFB	67	41.781	ENSPREG00000012496	safb	79	47.445	Poecilia_reticulata
ENSHGLG00100004228	SAFB	77	89.555	ENSPPYG00000009428	SAFB	100	79.318	Pongo_abelii
ENSHGLG00100004228	SAFB	74	83.201	ENSPCAG00000006475	SAFB	100	69.486	Procavia_capensis
ENSHGLG00100004228	SAFB	100	68.730	ENSPCOG00000014090	SAFB	52	90.196	Propithecus_coquereli
ENSHGLG00100004228	SAFB	100	70.985	ENSPVAG00000004913	SAFB	100	73.399	Pteropus_vampyrus
ENSHGLG00100004228	SAFB	98	89.855	ENSRNOG00000050543	Safb	100	91.133	Rattus_norvegicus
ENSHGLG00100004228	SAFB	100	78.109	ENSRBIG00000042509	SAFB	88	95.699	Rhinopithecus_bieti
ENSHGLG00100004228	SAFB	77	89.417	ENSRROG00000029278	SAFB	100	84.783	Rhinopithecus_roxellana
ENSHGLG00100004228	SAFB	77	89.247	ENSSBOG00000026291	SAFB	100	84.058	Saimiri_boliviensis_boliviensis
ENSHGLG00100004228	SAFB	71	45.760	ENSSFOG00015008156	safb	98	38.889	Scleropages_formosus
ENSHGLG00100004228	SAFB	70	41.488	ENSSDUG00000009652	safb	59	39.731	Seriola_dumerili
ENSHGLG00100004228	SAFB	64	56.102	ENSSPUG00000009747	-	67	55.801	Sphenodon_punctatus
ENSHGLG00100004228	SAFB	58	54.887	ENSSPUG00000009820	-	85	67.665	Sphenodon_punctatus
ENSHGLG00100004228	SAFB	77	89.247	ENSSSCG00000013522	SAFB	95	75.696	Sus_scrofa
ENSHGLG00100004228	SAFB	89	71.223	ENSTGUG00000000489	-	84	71.223	Taeniopygia_guttata
ENSHGLG00100004228	SAFB	74	58.991	ENSTGUG00000000502	-	97	51.471	Taeniopygia_guttata
ENSHGLG00100004228	SAFB	70	40.584	ENSTRUG00000003567	safb	64	38.835	Takifugu_rubripes
ENSHGLG00100004228	SAFB	67	69.159	ENSTBEG00000013124	-	60	69.159	Tupaia_belangeri
ENSHGLG00100004228	SAFB	92	98.413	ENSTTRG00000013588	SAFB	81	98.413	Tursiops_truncatus
ENSHGLG00100004228	SAFB	54	83.153	ENSUAMG00000024543	SAFB	94	68.043	Ursus_americanus
ENSHGLG00100004228	SAFB	91	92.908	ENSUMAG00000009734	SAFB	88	92.908	Ursus_maritimus
ENSHGLG00100004228	SAFB	67	93.077	ENSVPAG00000012043	SAFB	66	93.077	Vicugna_pacos
ENSHGLG00100004228	SAFB	77	89.401	ENSVVUG00000013720	SAFB	87	75.399	Vulpes_vulpes
ENSHGLG00100004228	SAFB	91	54.839	ENSXETG00000008755	safb	85	54.839	Xenopus_tropicalis
ENSHGLG00100004228	SAFB	72	44.785	ENSXMAG00000003458	safb	84	45.399	Xiphophorus_maculatus