EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004278 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 892 bases
Position: chrJH171904.1:3970579-3971470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005642	SMN	PF06003.12	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100005724	-	666	-	ENSHGLP00100005642	221 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004278	-	100	76.639	ENSHGLG00100004814	-	100	77.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004278	-	100	76.230	ENSG00000119953	SMNDC1	100	76.639	Homo_sapiens
ENSHGLG00100004278	-	100	59.438	ENSAPOG00000021772	smndc1	100	60.408	Acanthochromis_polyacanthus
ENSHGLG00100004278	-	100	76.639	ENSAMEG00000005251	SMNDC1	100	77.049	Ailuropoda_melanoleuca
ENSHGLG00100004278	-	100	60.081	ENSACIG00000004819	smndc1	100	61.066	Amphilophus_citrinellus
ENSHGLG00100004278	-	100	59.839	ENSAOCG00000017869	smndc1	100	60.816	Amphiprion_ocellaris
ENSHGLG00100004278	-	100	59.839	ENSAPEG00000007752	smndc1	100	60.816	Amphiprion_percula
ENSHGLG00100004278	-	100	59.350	ENSATEG00000006830	smndc1	100	61.066	Anabas_testudineus
ENSHGLG00100004278	-	79	71.212	ENSAPLG00000004322	SMNDC1	99	73.096	Anas_platyrhynchos
ENSHGLG00100004278	-	100	72.541	ENSACAG00000005983	SMNDC1	100	72.951	Anolis_carolinensis
ENSHGLG00100004278	-	100	76.639	ENSANAG00000032875	SMNDC1	100	77.049	Aotus_nancymaae
ENSHGLG00100004278	-	100	60.081	ENSACLG00000016360	smndc1	100	61.066	Astatotilapia_calliptera
ENSHGLG00100004278	-	100	59.919	ENSAMXG00000020310	smndc1	100	61.475	Astyanax_mexicanus
ENSHGLG00100004278	-	100	76.230	ENSBTAG00000000551	SMNDC1	100	76.639	Bos_taurus
ENSHGLG00100004278	-	100	76.639	ENSCJAG00000018624	SMNDC1	100	77.049	Callithrix_jacchus
ENSHGLG00100004278	-	100	76.639	ENSCAFG00000010720	SMNDC1	100	77.049	Canis_familiaris
ENSHGLG00100004278	-	100	76.639	ENSCAFG00020011913	SMNDC1	100	77.049	Canis_lupus_dingo
ENSHGLG00100004278	-	100	76.230	ENSCHIG00000010604	SMNDC1	100	76.639	Capra_hircus
ENSHGLG00100004278	-	100	76.230	ENSTSYG00000026454	SMNDC1	100	76.639	Carlito_syrichta
ENSHGLG00100004278	-	83	75.362	ENSCAPG00000009132	SMNDC1	100	75.362	Cavia_aperea
ENSHGLG00100004278	-	100	77.049	ENSCPOG00000031666	SMNDC1	100	77.459	Cavia_porcellus
ENSHGLG00100004278	-	100	76.639	ENSCCAG00000021793	SMNDC1	100	77.049	Cebus_capucinus
ENSHGLG00100004278	-	100	76.230	ENSCATG00000035910	SMNDC1	100	76.639	Cercocebus_atys
ENSHGLG00100004278	-	100	76.639	ENSCLAG00000002838	SMNDC1	100	77.049	Chinchilla_lanigera
ENSHGLG00100004278	-	100	76.639	ENSCSAG00000005169	SMNDC1	100	77.049	Chlorocebus_sabaeus
ENSHGLG00100004278	-	80	74.372	ENSCHOG00000002936	SMNDC1	100	74.372	Choloepus_hoffmanni
ENSHGLG00100004278	-	100	72.951	ENSCPBG00000012837	SMNDC1	100	75.410	Chrysemys_picta_bellii
ENSHGLG00100004278	-	100	69.874	ENSCANG00000034620	-	100	72.881	Colobus_angolensis_palliatus
ENSHGLG00100004278	-	100	76.639	ENSCANG00000031720	-	100	77.049	Colobus_angolensis_palliatus
ENSHGLG00100004278	-	100	57.787	ENSCANG00000036994	-	100	58.197	Colobus_angolensis_palliatus
ENSHGLG00100004278	-	100	75.820	ENSCGRG00001012973	Smndc1	100	76.230	Cricetulus_griseus_chok1gshd
ENSHGLG00100004278	-	100	75.820	ENSCGRG00000012396	Smndc1	100	76.230	Cricetulus_griseus_crigri
ENSHGLG00100004278	-	100	59.514	ENSCSEG00000015621	smndc1	100	61.728	Cynoglossus_semilaevis
ENSHGLG00100004278	-	100	59.274	ENSCVAG00000020432	smndc1	100	61.475	Cyprinodon_variegatus
ENSHGLG00100004278	-	100	60.887	ENSDARG00000056235	smndc1	100	61.885	Danio_rerio
ENSHGLG00100004278	-	100	76.639	ENSDNOG00000016387	SMNDC1	83	77.049	Dasypus_novemcinctus
ENSHGLG00100004278	-	100	76.639	ENSDORG00000023715	Smndc1	100	77.049	Dipodomys_ordii
ENSHGLG00100004278	-	95	36.290	FBgn0039977	CG17454	98	37.903	Drosophila_melanogaster
ENSHGLG00100004278	-	100	55.466	ENSEBUG00000010929	smndc1	100	56.275	Eptatretus_burgeri
ENSHGLG00100004278	-	100	76.639	ENSEASG00005014930	SMNDC1	100	77.049	Equus_asinus_asinus
ENSHGLG00100004278	-	100	76.639	ENSECAG00000029973	SMNDC1	100	77.049	Equus_caballus
ENSHGLG00100004278	-	53	87.013	ENSEEUG00000013407	-	67	83.721	Erinaceus_europaeus
ENSHGLG00100004278	-	100	59.677	ENSELUG00000000227	smndc1	100	60.331	Esox_lucius
ENSHGLG00100004278	-	100	76.639	ENSFCAG00000027353	SMNDC1	100	77.049	Felis_catus
ENSHGLG00100004278	-	100	72.653	ENSFALG00000002306	SMNDC1	100	74.180	Ficedula_albicollis
ENSHGLG00100004278	-	100	76.639	ENSFDAG00000006468	SMNDC1	100	77.049	Fukomys_damarensis
ENSHGLG00100004278	-	100	60.241	ENSFHEG00000020150	smndc1	100	61.224	Fundulus_heteroclitus
ENSHGLG00100004278	-	100	60.484	ENSGMOG00000016585	smndc1	100	62.449	Gadus_morhua
ENSHGLG00100004278	-	100	72.653	ENSGALG00000008561	SMNDC1	100	74.180	Gallus_gallus
ENSHGLG00100004278	-	100	59.438	ENSGAFG00000011582	smndc1	100	60.408	Gambusia_affinis
ENSHGLG00100004278	-	100	59.839	ENSGACG00000009468	smndc1	100	60.408	Gasterosteus_aculeatus
ENSHGLG00100004278	-	100	72.951	ENSGAGG00000024547	SMNDC1	100	75.410	Gopherus_agassizii
ENSHGLG00100004278	-	100	76.639	ENSGGOG00000010071	SMNDC1	100	77.049	Gorilla_gorilla
ENSHGLG00100004278	-	100	60.081	ENSHBUG00000017596	smndc1	100	61.066	Haplochromis_burtoni
ENSHGLG00100004278	-	100	84.163	ENSHGLG00000001157	-	100	84.163	Heterocephalus_glaber_female
ENSHGLG00100004278	-	100	76.639	ENSHGLG00000013390	-	100	77.049	Heterocephalus_glaber_female
ENSHGLG00100004278	-	100	59.274	ENSHCOG00000000783	smndc1	100	60.000	Hippocampus_comes
ENSHGLG00100004278	-	100	60.484	ENSIPUG00000004217	smndc1	100	61.475	Ictalurus_punctatus
ENSHGLG00100004278	-	100	76.230	ENSSTOG00000006088	SMNDC1	100	76.639	Ictidomys_tridecemlineatus
ENSHGLG00100004278	-	100	76.230	ENSJJAG00000019974	Smndc1	100	76.639	Jaculus_jaculus
ENSHGLG00100004278	-	100	58.871	ENSKMAG00000020134	smndc1	100	60.656	Kryptolebias_marmoratus
ENSHGLG00100004278	-	100	59.839	ENSLBEG00000004598	smndc1	100	60.408	Labrus_bergylta
ENSHGLG00100004278	-	100	66.803	ENSLACG00000007784	SMNDC1	100	66.803	Latimeria_chalumnae
ENSHGLG00100004278	-	100	65.021	ENSLOCG00000012355	smndc1	100	65.432	Lepisosteus_oculatus
ENSHGLG00100004278	-	100	74.494	ENSLAFG00000014353	SMNDC1	100	77.049	Loxodonta_africana
ENSHGLG00100004278	-	100	66.527	ENSMFAG00000038381	-	100	66.527	Macaca_fascicularis
ENSHGLG00100004278	-	100	76.639	ENSMFAG00000002433	-	100	77.049	Macaca_fascicularis
ENSHGLG00100004278	-	100	66.527	ENSMMUG00000045875	-	100	66.527	Macaca_mulatta
ENSHGLG00100004278	-	100	76.639	ENSMMUG00000007775	SMNDC1	100	77.049	Macaca_mulatta
ENSHGLG00100004278	-	100	76.639	ENSMNEG00000042963	-	100	77.049	Macaca_nemestrina
ENSHGLG00100004278	-	100	66.946	ENSMNEG00000033853	-	100	69.915	Macaca_nemestrina
ENSHGLG00100004278	-	100	77.500	ENSMLEG00000040236	SMNDC1	100	77.500	Mandrillus_leucophaeus
ENSHGLG00100004278	-	89	55.357	ENSMAMG00000018233	smndc1	87	56.364	Mastacembelus_armatus
ENSHGLG00100004278	-	100	60.081	ENSMZEG00005027510	smndc1	100	61.066	Maylandia_zebra
ENSHGLG00100004278	-	79	70.051	ENSMGAG00000010777	SMNDC1	83	73.096	Meleagris_gallopavo
ENSHGLG00100004278	-	99	68.511	ENSMAUG00000005459	-	93	69.362	Mesocricetus_auratus
ENSHGLG00100004278	-	100	76.639	ENSMAUG00000012243	-	100	77.049	Mesocricetus_auratus
ENSHGLG00100004278	-	100	68.852	ENSMICG00000031640	-	100	68.852	Microcebus_murinus
ENSHGLG00100004278	-	100	76.639	ENSMICG00000027336	-	100	77.049	Microcebus_murinus
ENSHGLG00100004278	-	100	76.230	ENSMOCG00000002458	Smndc1	100	76.639	Microtus_ochrogaster
ENSHGLG00100004278	-	100	60.643	ENSMMOG00000008856	smndc1	100	61.633	Mola_mola
ENSHGLG00100004278	-	100	75.820	ENSMODG00000010542	SMNDC1	100	76.230	Monodelphis_domestica
ENSHGLG00100004278	-	100	59.109	ENSMALG00000017598	smndc1	100	60.816	Monopterus_albus
ENSHGLG00100004278	-	100	76.230	MGP_CAROLIEiJ_G0023072	Smndc1	100	76.639	Mus_caroli
ENSHGLG00100004278	-	100	76.230	ENSMUSG00000025024	Smndc1	100	76.639	Mus_musculus
ENSHGLG00100004278	-	100	75.820	MGP_PahariEiJ_G0014560	Smndc1	100	76.230	Mus_pahari
ENSHGLG00100004278	-	100	76.230	MGP_SPRETEiJ_G0023993	Smndc1	100	76.639	Mus_spretus
ENSHGLG00100004278	-	100	76.639	ENSMPUG00000002089	SMNDC1	100	77.049	Mustela_putorius_furo
ENSHGLG00100004278	-	100	76.230	ENSMLUG00000016007	SMNDC1	100	76.639	Myotis_lucifugus
ENSHGLG00100004278	-	100	75.820	ENSNGAG00000006833	Smndc1	100	76.230	Nannospalax_galili
ENSHGLG00100004278	-	100	59.677	ENSNBRG00000017089	smndc1	100	60.656	Neolamprologus_brichardi
ENSHGLG00100004278	-	100	76.639	ENSNLEG00000015471	SMNDC1	100	77.049	Nomascus_leucogenys
ENSHGLG00100004278	-	72	47.191	ENSMEUG00000010120	-	99	47.423	Notamacropus_eugenii
ENSHGLG00100004278	-	100	77.049	ENSOPRG00000015348	SMNDC1	100	77.459	Ochotona_princeps
ENSHGLG00100004278	-	100	56.332	ENSODEG00000007594	-	100	58.079	Octodon_degus
ENSHGLG00100004278	-	100	59.677	ENSONIG00000000434	smndc1	100	60.656	Oreochromis_niloticus
ENSHGLG00100004278	-	100	75.000	ENSOANG00000001598	SMNDC1	100	75.410	Ornithorhynchus_anatinus
ENSHGLG00100004278	-	100	76.230	ENSOCUG00000008145	-	100	76.639	Oryctolagus_cuniculus
ENSHGLG00100004278	-	100	62.553	ENSOCUG00000012274	-	100	62.553	Oryctolagus_cuniculus
ENSHGLG00100004278	-	100	59.836	ENSORLG00000005934	smndc1	95	60.000	Oryzias_latipes
ENSHGLG00100004278	-	100	59.836	ENSORLG00020008796	smndc1	95	60.000	Oryzias_latipes_hni
ENSHGLG00100004278	-	100	59.836	ENSORLG00015013666	smndc1	100	60.000	Oryzias_latipes_hsok
ENSHGLG00100004278	-	100	61.728	ENSOMEG00000007590	smndc1	100	62.140	Oryzias_melastigma
ENSHGLG00100004278	-	100	76.230	ENSOGAG00000000571	SMNDC1	100	76.639	Otolemur_garnettii
ENSHGLG00100004278	-	100	76.230	ENSOARG00000009500	SMNDC1	100	76.639	Ovis_aries
ENSHGLG00100004278	-	100	76.639	ENSPPAG00000027815	SMNDC1	100	77.049	Pan_paniscus
ENSHGLG00100004278	-	100	76.639	ENSPPRG00000013749	SMNDC1	100	77.049	Panthera_pardus
ENSHGLG00100004278	-	100	76.639	ENSPTIG00000011451	SMNDC1	100	77.049	Panthera_tigris_altaica
ENSHGLG00100004278	-	100	76.639	ENSPTRG00000002937	SMNDC1	100	77.049	Pan_troglodytes
ENSHGLG00100004278	-	100	72.541	ENSPANG00000031346	-	100	72.541	Papio_anubis
ENSHGLG00100004278	-	100	76.639	ENSPANG00000020805	-	100	77.049	Papio_anubis
ENSHGLG00100004278	-	100	63.525	ENSPKIG00000017164	smndc1	100	65.164	Paramormyrops_kingsleyae
ENSHGLG00100004278	-	100	72.541	ENSPSIG00000012257	SMNDC1	100	75.000	Pelodiscus_sinensis
ENSHGLG00100004278	-	100	58.607	ENSPMGG00000015651	smndc1	100	60.996	Periophthalmus_magnuspinnatus
ENSHGLG00100004278	-	100	76.639	ENSPEMG00000022058	Smndc1	100	77.049	Peromyscus_maniculatus_bairdii
ENSHGLG00100004278	-	100	52.000	ENSPMAG00000007705	smndc1	100	53.846	Petromyzon_marinus
ENSHGLG00100004278	-	100	75.820	ENSPCIG00000018419	SMNDC1	100	76.230	Phascolarctos_cinereus
ENSHGLG00100004278	-	96	53.247	ENSPCIG00000009693	-	100	53.247	Phascolarctos_cinereus
ENSHGLG00100004278	-	100	59.274	ENSPFOG00000017113	smndc1	100	61.066	Poecilia_formosa
ENSHGLG00100004278	-	100	59.677	ENSPLAG00000010372	smndc1	100	61.475	Poecilia_latipinna
ENSHGLG00100004278	-	100	59.677	ENSPMEG00000012288	smndc1	100	61.224	Poecilia_mexicana
ENSHGLG00100004278	-	100	58.871	ENSPREG00000012279	smndc1	100	60.656	Poecilia_reticulata
ENSHGLG00100004278	-	100	76.639	ENSPPYG00000002643	SMNDC1	100	77.049	Pongo_abelii
ENSHGLG00100004278	-	80	70.792	ENSPCAG00000016183	SMNDC1	100	73.869	Procavia_capensis
ENSHGLG00100004278	-	100	76.639	ENSPCOG00000024343	SMNDC1	100	77.049	Propithecus_coquereli
ENSHGLG00100004278	-	74	90.909	ENSPVAG00000004368	SMNDC1	73	87.209	Pteropus_vampyrus
ENSHGLG00100004278	-	79	59.204	ENSPNYG00000024093	smndc1	86	60.406	Pundamilia_nyererei
ENSHGLG00100004278	-	100	60.729	ENSPNAG00000025285	smndc1	100	61.728	Pygocentrus_nattereri
ENSHGLG00100004278	-	100	76.230	ENSRNOG00000014833	Smndc1	100	76.639	Rattus_norvegicus
ENSHGLG00100004278	-	100	60.569	ENSRBIG00000032452	-	100	63.374	Rhinopithecus_bieti
ENSHGLG00100004278	-	100	76.230	ENSRBIG00000000224	-	100	76.639	Rhinopithecus_bieti
ENSHGLG00100004278	-	100	60.976	ENSRROG00000039125	-	100	63.786	Rhinopithecus_roxellana
ENSHGLG00100004278	-	100	76.639	ENSRROG00000044992	-	100	77.049	Rhinopithecus_roxellana
ENSHGLG00100004278	-	100	76.639	ENSSBOG00000026789	SMNDC1	100	77.049	Saimiri_boliviensis_boliviensis
ENSHGLG00100004278	-	100	75.820	ENSSHAG00000015189	SMNDC1	100	76.230	Sarcophilus_harrisii
ENSHGLG00100004278	-	100	63.306	ENSSFOG00015008311	smndc1	100	64.344	Scleropages_formosus
ENSHGLG00100004278	-	100	59.350	ENSSMAG00000020118	smndc1	100	61.066	Scophthalmus_maximus
ENSHGLG00100004278	-	100	59.919	ENSSDUG00000015330	smndc1	100	61.633	Seriola_dumerili
ENSHGLG00100004278	-	100	59.919	ENSSLDG00000017325	smndc1	100	61.633	Seriola_lalandi_dorsalis
ENSHGLG00100004278	-	100	76.639	ENSSARG00000006063	SMNDC1	100	77.049	Sorex_araneus
ENSHGLG00100004278	-	100	72.951	ENSSPUG00000004574	SMNDC1	100	73.361	Sphenodon_punctatus
ENSHGLG00100004278	-	100	57.895	ENSSPAG00000000338	smndc1	100	59.592	Stegastes_partitus
ENSHGLG00100004278	-	100	77.049	ENSSSCG00000030507	SMNDC1	100	77.459	Sus_scrofa
ENSHGLG00100004278	-	100	72.653	ENSTGUG00000010599	SMNDC1	100	74.180	Taeniopygia_guttata
ENSHGLG00100004278	-	100	59.109	ENSTRUG00000023281	smndc1	100	60.816	Takifugu_rubripes
ENSHGLG00100004278	-	100	58.943	ENSTNIG00000013331	smndc1	100	60.656	Tetraodon_nigroviridis
ENSHGLG00100004278	-	100	76.639	ENSTBEG00000014337	SMNDC1	100	77.049	Tupaia_belangeri
ENSHGLG00100004278	-	100	76.639	ENSUAMG00000008142	SMNDC1	100	77.049	Ursus_americanus
ENSHGLG00100004278	-	100	76.639	ENSUMAG00000023722	SMNDC1	100	77.049	Ursus_maritimus
ENSHGLG00100004278	-	79	74.619	ENSVPAG00000003402	SMNDC1	99	75.127	Vicugna_pacos
ENSHGLG00100004278	-	100	76.639	ENSVVUG00000007820	SMNDC1	100	77.049	Vulpes_vulpes
ENSHGLG00100004278	-	60	64.189	ENSXETG00000015415	SMNDC1	99	64.189	Xenopus_tropicalis
ENSHGLG00100004278	-	100	61.157	ENSXCOG00000009159	smndc1	100	61.157	Xiphophorus_couchianus
ENSHGLG00100004278	-	100	59.438	ENSXMAG00000012755	smndc1	100	60.656	Xiphophorus_maculatus