EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004479 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 52775 bases
Position: chrJH169663.1:423898-476672
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100005940	ResIII	PF04851.15	5.6e-07	1	1
ENSHGLP00100005941	ResIII	PF04851.15	1.2e-06	1	1
ENSHGLP00100005941	DEAD	PF00270.29	5.3e-50	1	1
ENSHGLP00100005940	DEAD	PF00270.29	6.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006023	-	3263	-	ENSHGLP00100005940	934 (aa)	-	UPI00034FD945
ENSHGLT00100006024	-	2670	-	ENSHGLP00100005941	889 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004479	-	50	37.086	ENSHGLG00100011895	-	79	34.834
ENSHGLG00100004479	-	94	75.086	ENSHGLG00100007138	-	95	75.086
ENSHGLG00100004479	-	50	38.612	ENSHGLG00100018132	DDX41	82	35.514
ENSHGLG00100004479	-	50	34.375	ENSHGLG00100019169	DDX59	71	34.375
ENSHGLG00100004479	-	52	35.464	ENSHGLG00100000759	-	73	35.451
ENSHGLG00100004479	-	52	45.726	ENSHGLG00100016515	DDX46	51	43.452
ENSHGLG00100004479	-	61	37.814	ENSHGLG00100001046	DDX5	85	38.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004479	-	100	95.634	ENSG00000198231	DDX42	100	98.077	Homo_sapiens
ENSHGLG00100004479	-	93	74.685	ENSAPOG00000017675	ddx42	98	73.348	Acanthochromis_polyacanthus
ENSHGLG00100004479	-	100	96.364	ENSAMEG00000003200	DDX42	100	96.364	Ailuropoda_melanoleuca
ENSHGLG00100004479	-	85	71.482	ENSACIG00000007376	ddx42	99	72.340	Amphilophus_citrinellus
ENSHGLG00100004479	-	99	67.983	ENSAOCG00000003520	ddx42	99	71.623	Amphiprion_ocellaris
ENSHGLG00100004479	-	90	76.651	ENSAPEG00000000984	ddx42	99	71.086	Amphiprion_percula
ENSHGLG00100004479	-	99	71.036	ENSATEG00000022920	ddx42	99	72.403	Anabas_testudineus
ENSHGLG00100004479	-	100	84.355	ENSAPLG00000010544	DDX42	100	83.420	Anas_platyrhynchos
ENSHGLG00100004479	-	100	83.070	ENSACAG00000003994	DDX42	99	84.004	Anolis_carolinensis
ENSHGLG00100004479	-	100	96.257	ENSANAG00000035693	DDX42	100	96.257	Aotus_nancymaae
ENSHGLG00100004479	-	89	76.822	ENSACLG00000025113	ddx42	99	72.727	Astatotilapia_calliptera
ENSHGLG00100004479	-	81	79.156	ENSAMXG00000011435	ddx42	99	69.969	Astyanax_mexicanus
ENSHGLG00100004479	-	100	93.664	ENSBTAG00000021058	DDX42	100	94.192	Bos_taurus
ENSHGLG00100004479	-	64	52.830	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSHGLG00100004479	-	100	96.578	ENSCJAG00000019649	DDX42	99	98.303	Callithrix_jacchus
ENSHGLG00100004479	-	100	96.788	ENSCAFG00000012818	DDX42	100	96.788	Canis_familiaris
ENSHGLG00100004479	-	100	96.895	ENSCAFG00020026631	DDX42	100	96.895	Canis_lupus_dingo
ENSHGLG00100004479	-	100	94.995	ENSCHIG00000014431	DDX42	100	95.101	Capra_hircus
ENSHGLG00100004479	-	100	94.979	ENSTSYG00000001380	DDX42	100	94.979	Carlito_syrichta
ENSHGLG00100004479	-	72	76.809	ENSCAPG00000013621	DDX42	94	76.809	Cavia_aperea
ENSHGLG00100004479	-	100	96.795	ENSCPOG00000005633	DDX42	100	96.795	Cavia_porcellus
ENSHGLG00100004479	-	100	91.337	ENSCCAG00000020612	DDX42	100	96.178	Cebus_capucinus
ENSHGLG00100004479	-	100	95.824	ENSCATG00000030490	DDX42	100	95.824	Cercocebus_atys
ENSHGLG00100004479	-	100	97.754	ENSCLAG00000003497	DDX42	100	97.754	Chinchilla_lanigera
ENSHGLG00100004479	-	100	91.737	ENSCSAG00000003914	DDX42	100	91.737	Chlorocebus_sabaeus
ENSHGLG00100004479	-	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSHGLG00100004479	-	100	84.205	ENSCPBG00000026682	DDX42	100	82.937	Chrysemys_picta_bellii
ENSHGLG00100004479	-	100	95.931	ENSCANG00000034663	DDX42	99	97.122	Colobus_angolensis_palliatus
ENSHGLG00100004479	-	100	95.187	ENSCGRG00001009775	Ddx42	100	95.187	Cricetulus_griseus_chok1gshd
ENSHGLG00100004479	-	100	95.187	ENSCGRG00000011718	Ddx42	100	95.187	Cricetulus_griseus_crigri
ENSHGLG00100004479	-	91	73.974	ENSCSEG00000021574	ddx42	99	70.319	Cynoglossus_semilaevis
ENSHGLG00100004479	-	99	70.075	ENSCVAG00000011404	ddx42	99	71.050	Cyprinodon_variegatus
ENSHGLG00100004479	-	100	69.916	ENSDARG00000037928	ddx42	99	70.293	Danio_rerio
ENSHGLG00100004479	-	100	89.765	ENSDNOG00000007961	DDX42	100	89.765	Dasypus_novemcinctus
ENSHGLG00100004479	-	100	87.313	ENSDORG00000004199	Ddx42	100	86.994	Dipodomys_ordii
ENSHGLG00100004479	-	66	60.514	FBgn0036104	CG6418	92	53.888	Drosophila_melanogaster
ENSHGLG00100004479	-	80	73.077	ENSEBUG00000001155	ddx42	91	73.077	Eptatretus_burgeri
ENSHGLG00100004479	-	100	97.540	ENSEASG00005013089	DDX42	100	97.540	Equus_asinus_asinus
ENSHGLG00100004479	-	100	97.647	ENSECAG00000022684	DDX42	100	97.647	Equus_caballus
ENSHGLG00100004479	-	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSHGLG00100004479	-	100	69.543	ENSELUG00000020593	ddx42	100	70.262	Esox_lucius
ENSHGLG00100004479	-	100	97.430	ENSFCAG00000003499	DDX42	100	97.430	Felis_catus
ENSHGLG00100004479	-	94	84.572	ENSFALG00000004675	DDX42	72	89.647	Ficedula_albicollis
ENSHGLG00100004479	-	100	97.545	ENSFDAG00000020516	DDX42	100	97.545	Fukomys_damarensis
ENSHGLG00100004479	-	99	68.770	ENSFHEG00000023290	ddx42	99	70.285	Fundulus_heteroclitus
ENSHGLG00100004479	-	75	77.997	ENSGMOG00000004595	ddx42	88	73.907	Gadus_morhua
ENSHGLG00100004479	-	100	82.881	ENSGALG00000000581	DDX42	100	81.940	Gallus_gallus
ENSHGLG00100004479	-	89	74.584	ENSGAFG00000011846	ddx42	96	72.277	Gambusia_affinis
ENSHGLG00100004479	-	99	68.443	ENSGACG00000009782	ddx42	99	67.410	Gasterosteus_aculeatus
ENSHGLG00100004479	-	100	84.696	ENSGAGG00000024411	DDX42	99	82.798	Gopherus_agassizii
ENSHGLG00100004479	-	100	96.253	ENSGGOG00000006779	DDX42	100	96.253	Gorilla_gorilla
ENSHGLG00100004479	-	89	77.061	ENSHBUG00000008705	ddx42	99	72.833	Haplochromis_burtoni
ENSHGLG00100004479	-	100	99.888	ENSHGLG00000010024	DDX42	100	99.888	Heterocephalus_glaber_female
ENSHGLG00100004479	-	84	77.665	ENSHCOG00000003357	ddx42	96	75.112	Hippocampus_comes
ENSHGLG00100004479	-	80	79.392	ENSIPUG00000013327	ddx42	100	69.401	Ictalurus_punctatus
ENSHGLG00100004479	-	100	97.439	ENSSTOG00000008922	DDX42	100	97.439	Ictidomys_tridecemlineatus
ENSHGLG00100004479	-	100	95.508	ENSJJAG00000011727	Ddx42	100	95.508	Jaculus_jaculus
ENSHGLG00100004479	-	99	66.597	ENSKMAG00000009914	ddx42	99	71.882	Kryptolebias_marmoratus
ENSHGLG00100004479	-	89	70.907	ENSLBEG00000004687	ddx42	99	66.667	Labrus_bergylta
ENSHGLG00100004479	-	99	75.748	ENSLACG00000013476	DDX42	97	77.021	Latimeria_chalumnae
ENSHGLG00100004479	-	100	74.145	ENSLOCG00000011764	ddx42	100	74.386	Lepisosteus_oculatus
ENSHGLG00100004479	-	100	96.684	ENSLAFG00000003249	DDX42	100	96.684	Loxodonta_africana
ENSHGLG00100004479	-	100	95.824	ENSMFAG00000031356	DDX42	100	95.824	Macaca_fascicularis
ENSHGLG00100004479	-	100	95.182	ENSMMUG00000016762	DDX42	100	95.122	Macaca_mulatta
ENSHGLG00100004479	-	100	95.824	ENSMNEG00000038250	DDX42	100	95.824	Macaca_nemestrina
ENSHGLG00100004479	-	100	95.527	ENSMLEG00000043080	DDX42	100	95.527	Mandrillus_leucophaeus
ENSHGLG00100004479	-	90	76.769	ENSMAMG00000021888	ddx42	98	71.102	Mastacembelus_armatus
ENSHGLG00100004479	-	89	76.822	ENSMZEG00005023103	ddx42	99	72.727	Maylandia_zebra
ENSHGLG00100004479	-	100	83.507	ENSMGAG00000001822	DDX42	100	82.147	Meleagris_gallopavo
ENSHGLG00100004479	-	75	97.017	ENSMAUG00000020774	-	94	97.017	Mesocricetus_auratus
ENSHGLG00100004479	-	100	96.578	ENSMICG00000009952	DDX42	100	95.936	Microcebus_murinus
ENSHGLG00100004479	-	100	94.011	ENSMOCG00000015504	Ddx42	100	93.904	Microtus_ochrogaster
ENSHGLG00100004479	-	89	72.619	ENSMMOG00000016963	ddx42	87	70.136	Mola_mola
ENSHGLG00100004479	-	50	97.430	ENSMODG00000009917	-	98	97.430	Monodelphis_domestica
ENSHGLG00100004479	-	99	71.778	ENSMALG00000007800	ddx42	99	72.340	Monopterus_albus
ENSHGLG00100004479	-	100	95.294	MGP_CAROLIEiJ_G0017314	Ddx42	100	95.294	Mus_caroli
ENSHGLG00100004479	-	100	95.294	ENSMUSG00000020705	Ddx42	100	95.294	Mus_musculus
ENSHGLG00100004479	-	79	99.106	MGP_PahariEiJ_G0018444	-	100	99.106	Mus_pahari
ENSHGLG00100004479	-	100	95.294	MGP_SPRETEiJ_G0018158	Ddx42	100	95.294	Mus_spretus
ENSHGLG00100004479	-	100	96.489	ENSMPUG00000014921	DDX42	100	96.489	Mustela_putorius_furo
ENSHGLG00100004479	-	100	95.258	ENSMLUG00000011645	DDX42	100	95.258	Myotis_lucifugus
ENSHGLG00100004479	-	100	95.187	ENSNGAG00000021897	Ddx42	100	95.187	Nannospalax_galili
ENSHGLG00100004479	-	89	75.508	ENSNBRG00000004466	ddx42	99	71.564	Neolamprologus_brichardi
ENSHGLG00100004479	-	100	95.824	ENSNLEG00000004248	DDX42	99	97.126	Nomascus_leucogenys
ENSHGLG00100004479	-	74	82.616	ENSMEUG00000013227	-	85	82.616	Notamacropus_eugenii
ENSHGLG00100004479	-	100	94.456	ENSOPRG00000014960	DDX42	100	94.456	Ochotona_princeps
ENSHGLG00100004479	-	100	93.690	ENSODEG00000007810	DDX42	100	93.690	Octodon_degus
ENSHGLG00100004479	-	89	76.941	ENSONIG00000000734	ddx42	99	72.833	Oreochromis_niloticus
ENSHGLG00100004479	-	58	92.208	ENSOANG00000000265	DDX42	100	92.208	Ornithorhynchus_anatinus
ENSHGLG00100004479	-	95	95.286	ENSOCUG00000004304	DDX42	88	95.286	Oryctolagus_cuniculus
ENSHGLG00100004479	-	100	70.148	ENSORLG00000002395	ddx42	100	69.630	Oryzias_latipes
ENSHGLG00100004479	-	100	70.390	ENSORLG00020011621	ddx42	100	71.308	Oryzias_latipes_hni
ENSHGLG00100004479	-	100	70.285	ENSORLG00015004487	ddx42	100	71.097	Oryzias_latipes_hsok
ENSHGLG00100004479	-	90	75.416	ENSOMEG00000020093	ddx42	100	70.062	Oryzias_melastigma
ENSHGLG00100004479	-	100	96.162	ENSOGAG00000006872	DDX42	100	96.162	Otolemur_garnettii
ENSHGLG00100004479	-	100	93.882	ENSOARG00000013540	DDX42	100	94.409	Ovis_aries
ENSHGLG00100004479	-	100	96.039	ENSPPAG00000007496	DDX42	100	96.039	Pan_paniscus
ENSHGLG00100004479	-	100	97.537	ENSPPRG00000002740	DDX42	100	97.537	Panthera_pardus
ENSHGLG00100004479	-	100	97.323	ENSPTIG00000009932	DDX42	100	97.323	Panthera_tigris_altaica
ENSHGLG00100004479	-	100	96.039	ENSPTRG00000009523	DDX42	100	96.039	Pan_troglodytes
ENSHGLG00100004479	-	100	95.824	ENSPANG00000020990	DDX42	100	95.824	Papio_anubis
ENSHGLG00100004479	-	100	69.442	ENSPKIG00000002901	ddx42	96	75.355	Paramormyrops_kingsleyae
ENSHGLG00100004479	-	86	91.677	ENSPSIG00000010289	DDX42	98	91.502	Pelodiscus_sinensis
ENSHGLG00100004479	-	100	67.511	ENSPMGG00000009323	ddx42	100	68.681	Periophthalmus_magnuspinnatus
ENSHGLG00100004479	-	100	95.406	ENSPEMG00000006755	Ddx42	100	95.406	Peromyscus_maniculatus_bairdii
ENSHGLG00100004479	-	80	72.084	ENSPMAG00000005580	ddx42	100	73.001	Petromyzon_marinus
ENSHGLG00100004479	-	100	91.640	ENSPCIG00000009093	DDX42	100	91.429	Phascolarctos_cinereus
ENSHGLG00100004479	-	99	70.428	ENSPFOG00000014104	ddx42	99	70.332	Poecilia_formosa
ENSHGLG00100004479	-	100	70.355	ENSPLAG00000010522	ddx42	99	70.332	Poecilia_latipinna
ENSHGLG00100004479	-	100	70.355	ENSPMEG00000010744	ddx42	99	70.938	Poecilia_mexicana
ENSHGLG00100004479	-	100	69.008	ENSPREG00000009926	ddx42	99	70.582	Poecilia_reticulata
ENSHGLG00100004479	-	100	93.743	ENSPPYG00000008531	DDX42	100	93.743	Pongo_abelii
ENSHGLG00100004479	-	92	90.825	ENSPCAG00000002474	DDX42	100	90.825	Procavia_capensis
ENSHGLG00100004479	-	100	86.952	ENSPCOG00000001559	DDX42	98	89.249	Propithecus_coquereli
ENSHGLG00100004479	-	100	92.308	ENSPVAG00000000160	DDX42	100	92.415	Pteropus_vampyrus
ENSHGLG00100004479	-	74	74.928	ENSPNYG00000013954	ddx42	97	70.200	Pundamilia_nyererei
ENSHGLG00100004479	-	77	80.245	ENSPNAG00000017352	ddx42	99	69.104	Pygocentrus_nattereri
ENSHGLG00100004479	-	100	94.866	ENSRNOG00000009474	Ddx42	100	94.866	Rattus_norvegicus
ENSHGLG00100004479	-	100	95.931	ENSRBIG00000004781	DDX42	99	97.122	Rhinopithecus_bieti
ENSHGLG00100004479	-	100	95.931	ENSRROG00000029794	DDX42	100	95.931	Rhinopithecus_roxellana
ENSHGLG00100004479	-	100	96.257	ENSSBOG00000029624	DDX42	100	96.257	Saimiri_boliviensis_boliviensis
ENSHGLG00100004479	-	74	60.863	ENSSHAG00000007919	-	99	60.979	Sarcophilus_harrisii
ENSHGLG00100004479	-	100	91.640	ENSSHAG00000012896	-	100	91.429	Sarcophilus_harrisii
ENSHGLG00100004479	-	81	81.735	ENSSFOG00015014064	ddx42	81	81.866	Scleropages_formosus
ENSHGLG00100004479	-	99	67.487	ENSSMAG00000009077	ddx42	99	71.990	Scophthalmus_maximus
ENSHGLG00100004479	-	99	71.670	ENSSDUG00000022221	ddx42	99	71.941	Seriola_dumerili
ENSHGLG00100004479	-	99	71.429	ENSSLDG00000018483	ddx42	99	71.383	Seriola_lalandi_dorsalis
ENSHGLG00100004479	-	100	95.722	ENSSARG00000009847	DDX42	100	95.722	Sorex_araneus
ENSHGLG00100004479	-	100	84.583	ENSSPUG00000018806	DDX42	100	82.777	Sphenodon_punctatus
ENSHGLG00100004479	-	90	76.561	ENSSPAG00000013055	ddx42	99	71.730	Stegastes_partitus
ENSHGLG00100004479	-	86	94.293	ENSSSCG00000017289	DDX42	97	94.913	Sus_scrofa
ENSHGLG00100004479	-	100	82.668	ENSTGUG00000001931	DDX42	100	82.668	Taeniopygia_guttata
ENSHGLG00100004479	-	99	69.501	ENSTRUG00000010711	ddx42	99	80.889	Takifugu_rubripes
ENSHGLG00100004479	-	81	93.561	ENSTBEG00000010159	DDX42	100	93.561	Tupaia_belangeri
ENSHGLG00100004479	-	100	96.368	ENSTTRG00000006962	DDX42	100	96.368	Tursiops_truncatus
ENSHGLG00100004479	-	100	96.364	ENSUAMG00000007321	DDX42	100	96.364	Ursus_americanus
ENSHGLG00100004479	-	100	95.615	ENSUMAG00000017438	DDX42	100	95.615	Ursus_maritimus
ENSHGLG00100004479	-	97	97.222	ENSVPAG00000009633	DDX42	93	97.222	Vicugna_pacos
ENSHGLG00100004479	-	100	97.109	ENSVVUG00000006095	DDX42	100	97.109	Vulpes_vulpes
ENSHGLG00100004479	-	100	76.146	ENSXETG00000003245	ddx42	100	75.442	Xenopus_tropicalis
ENSHGLG00100004479	-	85	69.963	ENSXCOG00000017560	ddx42	97	70.729	Xiphophorus_couchianus
ENSHGLG00100004479	-	100	70.514	ENSXMAG00000008138	ddx42	99	71.809	Xiphophorus_maculatus