EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 2445 bases
Position: chrJH171305.1:1744562-1747006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006072	TRM	PF02005.16	4.4e-57	1	2
ENSHGLP00100006072	TRM	PF02005.16	4.4e-57	2	2
ENSHGLP00100006071	TRM	PF02005.16	6.3e-57	1	2
ENSHGLP00100006071	TRM	PF02005.16	6.3e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006156	-	1953	-	ENSHGLP00100006072	650 (aa)	-	-
ENSHGLT00100006155	-	2103	-	ENSHGLP00100006071	700 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004569	-	99	81.694	ENSHGLG00100019412	-	100	82.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004569	-	99	78.138	ENSG00000121486	TRMT1L	100	82.949	Homo_sapiens
ENSHGLG00100004569	-	90	51.442	ENSAPOG00000011807	trmt1l	97	48.232	Acanthochromis_polyacanthus
ENSHGLG00100004569	-	99	77.315	ENSAMEG00000013538	TRMT1L	100	77.524	Ailuropoda_melanoleuca
ENSHGLG00100004569	-	72	56.432	ENSACIG00000012049	trmt1l	94	55.761	Amphilophus_citrinellus
ENSHGLG00100004569	-	90	51.122	ENSAOCG00000018112	trmt1l	97	51.140	Amphiprion_ocellaris
ENSHGLG00100004569	-	90	51.282	ENSAPEG00000021433	trmt1l	97	51.452	Amphiprion_percula
ENSHGLG00100004569	-	92	51.398	ENSATEG00000004573	trmt1l	90	56.272	Anabas_testudineus
ENSHGLG00100004569	-	92	60.742	ENSAPLG00000008394	TRMT1L	94	60.921	Anas_platyrhynchos
ENSHGLG00100004569	-	96	60.030	ENSACAG00000002342	TRMT1L	89	60.829	Anolis_carolinensis
ENSHGLG00100004569	-	99	78.273	ENSANAG00000038162	TRMT1L	100	77.868	Aotus_nancymaae
ENSHGLG00100004569	-	85	51.987	ENSACLG00000021625	trmt1l	92	51.262	Astatotilapia_calliptera
ENSHGLG00100004569	-	96	49.925	ENSAMXG00000009602	trmt1l	93	51.364	Astyanax_mexicanus
ENSHGLG00100004569	-	99	75.401	ENSBTAG00000011285	TRMT1L	100	75.936	Bos_taurus
ENSHGLG00100004569	-	99	77.883	ENSCJAG00000005456	TRMT1L	100	77.883	Callithrix_jacchus
ENSHGLG00100004569	-	96	79.403	ENSCAFG00000013518	TRMT1L	94	77.902	Canis_familiaris
ENSHGLG00100004569	-	96	79.434	ENSCAFG00020015640	TRMT1L	96	77.933	Canis_lupus_dingo
ENSHGLG00100004569	-	99	75.535	ENSCHIG00000016522	TRMT1L	100	76.070	Capra_hircus
ENSHGLG00100004569	-	99	77.038	ENSTSYG00000010465	TRMT1L	100	76.829	Carlito_syrichta
ENSHGLG00100004569	-	74	83.214	ENSCAPG00000012562	TRMT1L	88	83.214	Cavia_aperea
ENSHGLG00100004569	-	99	80.328	ENSCPOG00000001567	TRMT1L	100	80.328	Cavia_porcellus
ENSHGLG00100004569	-	99	78.408	ENSCCAG00000018699	TRMT1L	100	78.003	Cebus_capucinus
ENSHGLG00100004569	-	96	78.631	ENSCATG00000043114	TRMT1L	100	77.658	Cercocebus_atys
ENSHGLG00100004569	-	97	67.954	ENSCLAG00000010853	-	96	67.811	Chinchilla_lanigera
ENSHGLG00100004569	-	99	81.446	ENSCLAG00000010801	-	100	81.446	Chinchilla_lanigera
ENSHGLG00100004569	-	96	78.631	ENSCSAG00000012880	TRMT1L	100	77.658	Chlorocebus_sabaeus
ENSHGLG00100004569	-	58	88.477	ENSCHOG00000011164	TRMT1L	76	88.477	Choloepus_hoffmanni
ENSHGLG00100004569	-	98	61.662	ENSCPBG00000015694	TRMT1L	94	63.274	Chrysemys_picta_bellii
ENSHGLG00100004569	-	96	78.073	ENSCANG00000031107	TRMT1L	100	77.120	Colobus_angolensis_palliatus
ENSHGLG00100004569	-	99	73.046	ENSCGRG00001019297	Trmt1l	100	73.108	Cricetulus_griseus_chok1gshd
ENSHGLG00100004569	-	99	73.046	ENSCGRG00000005036	Trmt1l	100	73.108	Cricetulus_griseus_crigri
ENSHGLG00100004569	-	95	49.091	ENSCSEG00000001248	trmt1l	97	49.309	Cynoglossus_semilaevis
ENSHGLG00100004569	-	92	50.696	ENSCVAG00000012274	trmt1l	96	50.000	Cyprinodon_variegatus
ENSHGLG00100004569	-	92	49.307	ENSDARG00000042057	trmt1l	91	49.846	Danio_rerio
ENSHGLG00100004569	-	99	75.505	ENSDNOG00000005239	TRMT1L	100	75.505	Dasypus_novemcinctus
ENSHGLG00100004569	-	95	76.341	ENSDORG00000003298	Trmt1l	100	74.249	Dipodomys_ordii
ENSHGLG00100004569	-	76	88.066	ENSETEG00000015895	TRMT1L	80	88.066	Echinops_telfairi
ENSHGLG00100004569	-	83	43.705	ENSEBUG00000010301	trmt1l	83	43.525	Eptatretus_burgeri
ENSHGLG00100004569	-	99	72.400	ENSEASG00005005551	TRMT1L	100	72.400	Equus_asinus_asinus
ENSHGLG00100004569	-	99	76.070	ENSECAG00000020999	TRMT1L	95	76.070	Equus_caballus
ENSHGLG00100004569	-	90	73.611	ENSEEUG00000014110	TRMT1L	88	76.984	Erinaceus_europaeus
ENSHGLG00100004569	-	90	52.524	ENSELUG00000020587	trmt1l	89	52.373	Esox_lucius
ENSHGLG00100004569	-	99	78.095	ENSFCAG00000011285	TRMT1L	100	77.687	Felis_catus
ENSHGLG00100004569	-	94	58.118	ENSFALG00000003177	TRMT1L	100	58.850	Ficedula_albicollis
ENSHGLG00100004569	-	99	80.790	ENSFDAG00000008822	TRMT1L	100	80.518	Fukomys_damarensis
ENSHGLG00100004569	-	80	56.273	ENSFHEG00000014328	trmt1l	99	56.089	Fundulus_heteroclitus
ENSHGLG00100004569	-	89	51.797	ENSGMOG00000009535	trmt1l	98	52.033	Gadus_morhua
ENSHGLG00100004569	-	95	59.789	ENSGALG00000033077	TRMT1L	86	59.789	Gallus_gallus
ENSHGLG00100004569	-	95	48.281	ENSGAFG00000012445	trmt1l	93	49.923	Gambusia_affinis
ENSHGLG00100004569	-	89	50.237	ENSGACG00000005050	trmt1l	96	55.000	Gasterosteus_aculeatus
ENSHGLG00100004569	-	97	62.370	ENSGAGG00000007441	TRMT1L	83	65.474	Gopherus_agassizii
ENSHGLG00100004569	-	99	78.003	ENSGGOG00000011778	TRMT1L	100	77.598	Gorilla_gorilla
ENSHGLG00100004569	-	85	51.669	ENSHBUG00000000622	trmt1l	92	50.946	Haplochromis_burtoni
ENSHGLG00100004569	-	99	82.584	ENSHGLG00000003135	-	100	83.427	Heterocephalus_glaber_female
ENSHGLG00100004569	-	100	100.000	ENSHGLG00000012595	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100004569	-	89	51.613	ENSIPUG00000008873	trmt1l	97	51.447	Ictalurus_punctatus
ENSHGLG00100004569	-	99	77.808	ENSSTOG00000010332	TRMT1L	100	77.883	Ictidomys_tridecemlineatus
ENSHGLG00100004569	-	97	74.041	ENSJJAG00000010929	Trmt1l	100	71.526	Jaculus_jaculus
ENSHGLG00100004569	-	90	49.678	ENSKMAG00000010310	trmt1l	92	50.321	Kryptolebias_marmoratus
ENSHGLG00100004569	-	96	47.465	ENSLBEG00000003487	trmt1l	93	49.691	Labrus_bergylta
ENSHGLG00100004569	-	87	47.141	ENSLBEG00000007982	-	92	49.573	Labrus_bergylta
ENSHGLG00100004569	-	91	56.086	ENSLACG00000008447	TRMT1L	95	56.595	Latimeria_chalumnae
ENSHGLG00100004569	-	92	52.795	ENSLOCG00000001781	trmt1l	91	52.795	Lepisosteus_oculatus
ENSHGLG00100004569	-	99	76.391	ENSLAFG00000004339	TRMT1L	100	76.526	Loxodonta_africana
ENSHGLG00100004569	-	96	78.492	ENSMFAG00000037592	TRMT1L	100	77.524	Macaca_fascicularis
ENSHGLG00100004569	-	100	78.632	ENSMMUG00000013879	TRMT1L	100	78.205	Macaca_mulatta
ENSHGLG00100004569	-	96	78.631	ENSMNEG00000041637	TRMT1L	100	77.658	Macaca_nemestrina
ENSHGLG00100004569	-	96	78.492	ENSMLEG00000004840	TRMT1L	100	77.524	Mandrillus_leucophaeus
ENSHGLG00100004569	-	90	49.678	ENSMAMG00000015305	trmt1l	98	51.535	Mastacembelus_armatus
ENSHGLG00100004569	-	85	51.828	ENSMZEG00005017822	trmt1l	92	51.104	Maylandia_zebra
ENSHGLG00100004569	-	94	58.886	ENSMGAG00000000930	TRMT1L	100	58.850	Meleagris_gallopavo
ENSHGLG00100004569	-	99	70.396	ENSMAUG00000019870	Trmt1l	100	70.014	Mesocricetus_auratus
ENSHGLG00100004569	-	99	78.408	ENSMICG00000009494	TRMT1L	100	78.003	Microcebus_murinus
ENSHGLG00100004569	-	99	71.930	ENSMOCG00000016453	Trmt1l	100	71.989	Microtus_ochrogaster
ENSHGLG00100004569	-	88	50.828	ENSMMOG00000016961	trmt1l	96	50.828	Mola_mola
ENSHGLG00100004569	-	99	64.368	ENSMODG00000007454	TRMT1L	75	66.970	Monodelphis_domestica
ENSHGLG00100004569	-	92	49.767	ENSMALG00000019306	trmt1l	91	50.877	Monopterus_albus
ENSHGLG00100004569	-	99	72.690	MGP_CAROLIEiJ_G0014693	Trmt1l	97	72.549	Mus_caroli
ENSHGLG00100004569	-	99	72.973	ENSMUSG00000053286	Trmt1l	100	72.432	Mus_musculus
ENSHGLG00100004569	-	99	72.140	MGP_PahariEiJ_G0027929	Trmt1l	100	72.065	Mus_pahari
ENSHGLG00100004569	-	86	75.385	MGP_SPRETEiJ_G0015500	Trmt1l	100	76.378	Mus_spretus
ENSHGLG00100004569	-	99	74.661	ENSMPUG00000011859	TRMT1L	100	75.745	Mustela_putorius_furo
ENSHGLG00100004569	-	95	78.947	ENSMLUG00000001136	TRMT1L	100	76.975	Myotis_lucifugus
ENSHGLG00100004569	-	99	73.505	ENSNGAG00000011685	Trmt1l	100	74.321	Nannospalax_galili
ENSHGLG00100004569	-	63	53.412	ENSNBRG00000004053	trmt1l	94	39.147	Neolamprologus_brichardi
ENSHGLG00100004569	-	99	78.677	ENSNLEG00000018030	TRMT1L	100	78.273	Nomascus_leucogenys
ENSHGLG00100004569	-	86	65.693	ENSMEUG00000011344	TRMT1L	87	65.693	Notamacropus_eugenii
ENSHGLG00100004569	-	94	67.428	ENSOPRG00000000680	TRMT1L	99	67.580	Ochotona_princeps
ENSHGLG00100004569	-	99	76.093	ENSODEG00000000826	TRMT1L	100	76.093	Octodon_degus
ENSHGLG00100004569	-	89	51.356	ENSONIG00000007823	trmt1l	100	51.905	Oreochromis_niloticus
ENSHGLG00100004569	-	94	64.122	ENSOANG00000001010	TRMT1L	99	64.122	Ornithorhynchus_anatinus
ENSHGLG00100004569	-	96	72.727	ENSOCUG00000004896	TRMT1L	92	73.939	Oryctolagus_cuniculus
ENSHGLG00100004569	-	88	51.786	ENSORLG00000029610	trmt1l	92	51.496	Oryzias_latipes
ENSHGLG00100004569	-	88	51.786	ENSORLG00020002203	trmt1l	92	51.496	Oryzias_latipes_hni
ENSHGLG00100004569	-	88	51.466	ENSORLG00015021512	trmt1l	92	51.104	Oryzias_latipes_hsok
ENSHGLG00100004569	-	78	53.435	ENSOMEG00000016275	trmt1l	79	53.244	Oryzias_melastigma
ENSHGLG00100004569	-	93	70.312	ENSOGAG00000016186	TRMT1L	99	69.829	Otolemur_garnettii
ENSHGLG00100004569	-	99	74.833	ENSOARG00000003786	TRMT1L	100	75.904	Ovis_aries
ENSHGLG00100004569	-	99	78.273	ENSPPAG00000029141	TRMT1L	100	77.868	Pan_paniscus
ENSHGLG00100004569	-	99	77.959	ENSPPRG00000023981	TRMT1L	100	77.551	Panthera_pardus
ENSHGLG00100004569	-	99	78.095	ENSPTIG00000021754	TRMT1L	100	77.687	Panthera_tigris_altaica
ENSHGLG00100004569	-	99	78.273	ENSPTRG00000001776	TRMT1L	100	77.868	Pan_troglodytes
ENSHGLG00100004569	-	96	78.448	ENSPANG00000020890	TRMT1L	100	77.455	Papio_anubis
ENSHGLG00100004569	-	95	49.425	ENSPKIG00000005941	trmt1l	89	52.305	Paramormyrops_kingsleyae
ENSHGLG00100004569	-	92	64.174	ENSPSIG00000010011	TRMT1L	94	64.496	Pelodiscus_sinensis
ENSHGLG00100004569	-	72	50.895	ENSPMGG00000021359	trmt1l	85	50.600	Periophthalmus_magnuspinnatus
ENSHGLG00100004569	-	96	73.913	ENSPEMG00000000031	Trmt1l	100	73.777	Peromyscus_maniculatus_bairdii
ENSHGLG00100004569	-	89	46.069	ENSPMAG00000005838	trmt1l	100	45.984	Petromyzon_marinus
ENSHGLG00100004569	-	99	64.530	ENSPCIG00000002409	TRMT1L	91	65.698	Phascolarctos_cinereus
ENSHGLG00100004569	-	95	49.031	ENSPFOG00000003872	trmt1l	100	51.149	Poecilia_formosa
ENSHGLG00100004569	-	95	48.882	ENSPLAG00000010387	trmt1l	93	51.008	Poecilia_latipinna
ENSHGLG00100004569	-	95	49.031	ENSPMEG00000011828	trmt1l	90	54.562	Poecilia_mexicana
ENSHGLG00100004569	-	92	50.077	ENSPREG00000002866	trmt1l	93	50.693	Poecilia_reticulata
ENSHGLG00100004569	-	99	78.003	ENSPPYG00000000416	TRMT1L	100	77.598	Pongo_abelii
ENSHGLG00100004569	-	83	82.400	ENSPCAG00000008257	TRMT1L	87	82.400	Procavia_capensis
ENSHGLG00100004569	-	86	74.757	ENSPCOG00000005682	TRMT1L	94	74.757	Propithecus_coquereli
ENSHGLG00100004569	-	99	68.548	ENSPVAG00000005961	TRMT1L	100	68.952	Pteropus_vampyrus
ENSHGLG00100004569	-	80	56.030	ENSPNYG00000005607	trmt1l	97	50.562	Pundamilia_nyererei
ENSHGLG00100004569	-	90	51.429	ENSPNAG00000004389	trmt1l	89	51.887	Pygocentrus_nattereri
ENSHGLG00100004569	-	99	72.616	ENSRNOG00000002580	Trmt1l	100	72.678	Rattus_norvegicus
ENSHGLG00100004569	-	96	78.352	ENSRBIG00000042589	TRMT1L	100	77.389	Rhinopithecus_bieti
ENSHGLG00100004569	-	96	78.352	ENSRROG00000032183	TRMT1L	100	77.389	Rhinopithecus_roxellana
ENSHGLG00100004569	-	99	77.868	ENSSBOG00000029282	TRMT1L	100	77.328	Saimiri_boliviensis_boliviensis
ENSHGLG00100004569	-	93	52.301	ENSSFOG00015004878	trmt1l	92	52.705	Scleropages_formosus
ENSHGLG00100004569	-	64	55.238	ENSSMAG00000015425	trmt1l	96	55.238	Scophthalmus_maximus
ENSHGLG00100004569	-	90	51.587	ENSSDUG00000021807	trmt1l	88	56.852	Seriola_dumerili
ENSHGLG00100004569	-	80	57.037	ENSSLDG00000016579	trmt1l	97	52.520	Seriola_lalandi_dorsalis
ENSHGLG00100004569	-	73	73.243	ENSSARG00000010135	TRMT1L	87	72.789	Sorex_araneus
ENSHGLG00100004569	-	81	69.485	ENSSPUG00000003927	TRMT1L	88	68.199	Sphenodon_punctatus
ENSHGLG00100004569	-	90	51.752	ENSSPAG00000008597	trmt1l	90	52.389	Stegastes_partitus
ENSHGLG00100004569	-	99	74.319	ENSSSCG00000021393	TRMT1L	98	70.604	Sus_scrofa
ENSHGLG00100004569	-	91	59.375	ENSTGUG00000003737	TRMT1L	94	59.720	Taeniopygia_guttata
ENSHGLG00100004569	-	88	43.729	ENSTRUG00000002396	trmt1l	95	68.750	Takifugu_rubripes
ENSHGLG00100004569	-	64	57.243	ENSTNIG00000005534	trmt1l	99	56.573	Tetraodon_nigroviridis
ENSHGLG00100004569	-	86	77.778	ENSTBEG00000016498	TRMT1L	86	77.778	Tupaia_belangeri
ENSHGLG00100004569	-	99	73.930	ENSTTRG00000005892	TRMT1L	97	75.174	Tursiops_truncatus
ENSHGLG00100004569	-	99	77.120	ENSUAMG00000020936	TRMT1L	100	77.658	Ursus_americanus
ENSHGLG00100004569	-	99	77.224	ENSUMAG00000021919	TRMT1L	99	77.763	Ursus_maritimus
ENSHGLG00100004569	-	94	78.485	ENSVPAG00000011854	TRMT1L	100	78.097	Vicugna_pacos
ENSHGLG00100004569	-	96	79.434	ENSVVUG00000009166	TRMT1L	96	77.933	Vulpes_vulpes
ENSHGLG00100004569	-	73	49.801	ENSXETG00000004539	trmt1l	95	49.801	Xenopus_tropicalis
ENSHGLG00100004569	-	84	52.143	ENSXCOG00000007372	trmt1l	86	52.143	Xiphophorus_couchianus
ENSHGLG00100004569	-	95	49.025	ENSXMAG00000003575	trmt1l	95	49.394	Xiphophorus_maculatus