EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100004708 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 60742 bases
Position: chrJH171319.1:1014734-1075475
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006261	RRM_1	PF00076.22	1.6e-09	1	1
ENSHGLP00100006262	RRM_1	PF00076.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006349	SCAF8-202	3816	-	ENSHGLP00100006262	1271 (aa)	-	-
ENSHGLT00100006348	SCAF8-201	8029	-	ENSHGLP00100006261	1261 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004708	SCAF8	100	95.563	ENSG00000213079	SCAF8	100	94.969	Homo_sapiens
ENSHGLG00100004708	SCAF8	87	67.966	ENSAPOG00000015527	SCAF8	76	67.600	Acanthochromis_polyacanthus
ENSHGLG00100004708	SCAF8	100	94.295	ENSAMEG00000007583	SCAF8	95	94.299	Ailuropoda_melanoleuca
ENSHGLG00100004708	SCAF8	87	67.966	ENSAOCG00000002421	SCAF8	76	67.600	Amphiprion_ocellaris
ENSHGLG00100004708	SCAF8	88	65.328	ENSATEG00000006959	SCAF8	96	64.677	Anabas_testudineus
ENSHGLG00100004708	SCAF8	100	79.278	ENSAPLG00000005765	SCAF8	100	78.738	Anas_platyrhynchos
ENSHGLG00100004708	SCAF8	100	74.077	ENSACAG00000005282	SCAF8	100	73.655	Anolis_carolinensis
ENSHGLG00100004708	SCAF8	100	95.325	ENSANAG00000036184	SCAF8	100	94.733	Aotus_nancymaae
ENSHGLG00100004708	SCAF8	87	68.889	ENSACLG00000018828	SCAF8	79	68.480	Astatotilapia_calliptera
ENSHGLG00100004708	SCAF8	100	93.423	ENSBTAG00000031917	SCAF8	100	92.846	Bos_taurus
ENSHGLG00100004708	SCAF8	100	95.087	ENSCJAG00000012631	SCAF8	94	95.091	Callithrix_jacchus
ENSHGLG00100004708	SCAF8	100	94.537	ENSCAFG00000000570	SCAF8	99	94.541	Canis_familiaris
ENSHGLG00100004708	SCAF8	100	94.537	ENSCAFG00020015048	SCAF8	99	94.173	Canis_lupus_dingo
ENSHGLG00100004708	SCAF8	100	93.344	ENSCHIG00000025041	SCAF8	100	92.767	Capra_hircus
ENSHGLG00100004708	SCAF8	100	94.612	ENSTSYG00000010991	SCAF8	97	94.616	Carlito_syrichta
ENSHGLG00100004708	SCAF8	66	98.707	ENSCAPG00000003300	SCAF8	85	98.684	Cavia_aperea
ENSHGLG00100004708	SCAF8	100	89.802	ENSCPOG00000022216	-	99	89.012	Cavia_porcellus
ENSHGLG00100004708	SCAF8	100	95.008	ENSCCAG00000024952	SCAF8	100	94.418	Cebus_capucinus
ENSHGLG00100004708	SCAF8	100	96.038	ENSCATG00000035361	SCAF8	100	95.440	Cercocebus_atys
ENSHGLG00100004708	SCAF8	100	96.907	ENSCLAG00000004910	SCAF8	100	96.907	Chinchilla_lanigera
ENSHGLG00100004708	SCAF8	100	96.038	ENSCSAG00000013430	SCAF8	98	96.041	Chlorocebus_sabaeus
ENSHGLG00100004708	SCAF8	100	95.721	ENSCANG00000039499	SCAF8	99	95.721	Colobus_angolensis_palliatus
ENSHGLG00100004708	SCAF8	100	91.356	ENSCGRG00001020167	Scaf8	100	90.795	Cricetulus_griseus_chok1gshd
ENSHGLG00100004708	SCAF8	100	91.356	ENSCGRG00000004120	Scaf8	99	91.356	Cricetulus_griseus_crigri
ENSHGLG00100004708	SCAF8	87	65.488	ENSCSEG00000000043	-	77	66.707	Cynoglossus_semilaevis
ENSHGLG00100004708	SCAF8	60	66.535	ENSCVAG00000000925	SCAF8	56	66.010	Cyprinodon_variegatus
ENSHGLG00100004708	SCAF8	97	87.787	ENSDNOG00000025271	SCAF8	100	91.393	Dasypus_novemcinctus
ENSHGLG00100004708	SCAF8	100	92.880	ENSDORG00000006391	Scaf8	99	92.959	Dipodomys_ordii
ENSHGLG00100004708	SCAF8	100	94.295	ENSEASG00005018879	SCAF8	100	93.637	Equus_asinus_asinus
ENSHGLG00100004708	SCAF8	100	94.374	ENSECAG00000005540	SCAF8	100	93.789	Equus_caballus
ENSHGLG00100004708	SCAF8	82	69.503	ENSELUG00000002779	SCAF8	72	68.889	Esox_lucius
ENSHGLG00100004708	SCAF8	100	94.770	ENSFCAG00000023424	SCAF8	100	94.182	Felis_catus
ENSHGLG00100004708	SCAF8	100	78.667	ENSFALG00000012433	SCAF8	100	78.460	Ficedula_albicollis
ENSHGLG00100004708	SCAF8	100	98.176	ENSFDAG00000010335	SCAF8	99	98.176	Fukomys_damarensis
ENSHGLG00100004708	SCAF8	91	67.794	ENSFHEG00000008284	SCAF8	77	67.544	Fundulus_heteroclitus
ENSHGLG00100004708	SCAF8	80	56.071	ENSGMOG00000018812	SCAF8	77	59.852	Gadus_morhua
ENSHGLG00100004708	SCAF8	100	79.859	ENSGALG00000013635	SCAF8	98	79.467	Gallus_gallus
ENSHGLG00100004708	SCAF8	91	67.706	ENSGAFG00000018033	SCAF8	78	63.793	Gambusia_affinis
ENSHGLG00100004708	SCAF8	93	53.846	ENSGACG00000006909	SCAF8	99	54.938	Gasterosteus_aculeatus
ENSHGLG00100004708	SCAF8	63	72.325	ENSGAGG00000017820	-	88	72.325	Gopherus_agassizii
ENSHGLG00100004708	SCAF8	100	95.563	ENSGGOG00000008645	SCAF8	100	94.969	Gorilla_gorilla
ENSHGLG00100004708	SCAF8	87	68.765	ENSHBUG00000019537	SCAF8	79	68.356	Haplochromis_burtoni
ENSHGLG00100004708	SCAF8	100	100.000	ENSHGLG00000003619	SCAF8	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100004708	SCAF8	100	95.800	ENSSTOG00000026043	SCAF8	99	95.804	Ictidomys_tridecemlineatus
ENSHGLG00100004708	SCAF8	100	92.235	ENSJJAG00000020480	Scaf8	100	91.654	Jaculus_jaculus
ENSHGLG00100004708	SCAF8	92	67.479	ENSKMAG00000012767	SCAF8	77	67.113	Kryptolebias_marmoratus
ENSHGLG00100004708	SCAF8	67	75.926	ENSLBEG00000012484	-	59	76.071	Labrus_bergylta
ENSHGLG00100004708	SCAF8	100	61.260	ENSLOCG00000016856	SCAF8	99	60.472	Lepisosteus_oculatus
ENSHGLG00100004708	SCAF8	100	91.930	ENSLAFG00000000022	SCAF8	100	91.915	Loxodonta_africana
ENSHGLG00100004708	SCAF8	100	96.038	ENSMFAG00000032738	SCAF8	100	95.440	Macaca_fascicularis
ENSHGLG00100004708	SCAF8	100	96.038	ENSMMUG00000015163	SCAF8	100	95.440	Macaca_mulatta
ENSHGLG00100004708	SCAF8	100	96.038	ENSMNEG00000043466	SCAF8	100	95.440	Macaca_nemestrina
ENSHGLG00100004708	SCAF8	100	96.038	ENSMLEG00000034845	SCAF8	99	96.038	Mandrillus_leucophaeus
ENSHGLG00100004708	SCAF8	84	65.051	ENSMAMG00000009457	SCAF8	76	64.158	Mastacembelus_armatus
ENSHGLG00100004708	SCAF8	87	68.765	ENSMZEG00005005698	SCAF8	79	68.356	Maylandia_zebra
ENSHGLG00100004708	SCAF8	100	79.453	ENSMGAG00000012762	SCAF8	99	79.219	Meleagris_gallopavo
ENSHGLG00100004708	SCAF8	100	90.722	ENSMAUG00000009513	Scaf8	100	90.722	Mesocricetus_auratus
ENSHGLG00100004708	SCAF8	100	94.141	ENSMICG00000028965	SCAF8	100	93.401	Microcebus_murinus
ENSHGLG00100004708	SCAF8	100	91.990	ENSMOCG00000014950	Scaf8	100	91.424	Microtus_ochrogaster
ENSHGLG00100004708	SCAF8	85	64.594	ENSMMOG00000002216	SCAF8	78	63.579	Mola_mola
ENSHGLG00100004708	SCAF8	100	85.601	ENSMODG00000008301	SCAF8	99	85.613	Monodelphis_domestica
ENSHGLG00100004708	SCAF8	87	68.227	ENSMALG00000011584	SCAF8	78	67.980	Monopterus_albus
ENSHGLG00100004708	SCAF8	100	91.039	MGP_CAROLIEiJ_G0021016	Scaf8	100	90.480	Mus_caroli
ENSHGLG00100004708	SCAF8	100	91.118	ENSMUSG00000046201	Scaf8	100	90.559	Mus_musculus
ENSHGLG00100004708	SCAF8	100	91.594	MGP_PahariEiJ_G0023334	Scaf8	100	91.031	Mus_pahari
ENSHGLG00100004708	SCAF8	100	93.899	ENSMPUG00000001974	SCAF8	98	93.903	Mustela_putorius_furo
ENSHGLG00100004708	SCAF8	100	92.552	ENSMLUG00000029190	SCAF8	99	92.552	Myotis_lucifugus
ENSHGLG00100004708	SCAF8	100	92.466	ENSNGAG00000012332	Scaf8	100	91.896	Nannospalax_galili
ENSHGLG00100004708	SCAF8	100	52.096	ENSNBRG00000009067	SCAF8	99	52.106	Neolamprologus_brichardi
ENSHGLG00100004708	SCAF8	100	94.229	ENSNLEG00000015509	SCAF8	99	94.229	Nomascus_leucogenys
ENSHGLG00100004708	SCAF8	70	92.857	ENSOPRG00000018413	-	76	93.939	Ochotona_princeps
ENSHGLG00100004708	SCAF8	100	97.464	ENSODEG00000007296	SCAF8	100	96.855	Octodon_degus
ENSHGLG00100004708	SCAF8	100	55.132	ENSONIG00000008119	SCAF8	99	55.156	Oreochromis_niloticus
ENSHGLG00100004708	SCAF8	100	95.642	ENSOCUG00000026063	SCAF8	99	95.645	Oryctolagus_cuniculus
ENSHGLG00100004708	SCAF8	86	68.375	ENSORLG00000017358	SCAF8	77	68.375	Oryzias_latipes
ENSHGLG00100004708	SCAF8	86	68.500	ENSORLG00020002214	SCAF8	77	67.235	Oryzias_latipes_hni
ENSHGLG00100004708	SCAF8	86	68.625	ENSORLG00015015779	SCAF8	77	68.625	Oryzias_latipes_hsok
ENSHGLG00100004708	SCAF8	86	68.625	ENSOMEG00000015471	SCAF8	77	68.625	Oryzias_melastigma
ENSHGLG00100004708	SCAF8	100	94.532	ENSOGAG00000034223	SCAF8	94	94.537	Otolemur_garnettii
ENSHGLG00100004708	SCAF8	100	93.344	ENSOARG00000004159	SCAF8	99	93.344	Ovis_aries
ENSHGLG00100004708	SCAF8	100	95.404	ENSPPAG00000039826	SCAF8	100	94.811	Pan_paniscus
ENSHGLG00100004708	SCAF8	100	94.849	ENSPPRG00000023175	SCAF8	100	94.261	Panthera_pardus
ENSHGLG00100004708	SCAF8	100	94.849	ENSPTIG00000014836	SCAF8	99	94.849	Panthera_tigris_altaica
ENSHGLG00100004708	SCAF8	100	95.563	ENSPTRG00000018727	SCAF8	100	94.969	Pan_troglodytes
ENSHGLG00100004708	SCAF8	100	95.880	ENSPANG00000017489	SCAF8	99	94.532	Papio_anubis
ENSHGLG00100004708	SCAF8	95	71.887	ENSPKIG00000021212	SCAF8	99	70.988	Paramormyrops_kingsleyae
ENSHGLG00100004708	SCAF8	89	73.775	ENSPSIG00000008614	SCAF8	94	76.718	Pelodiscus_sinensis
ENSHGLG00100004708	SCAF8	100	92.070	ENSPEMG00000010531	Scaf8	100	92.070	Peromyscus_maniculatus_bairdii
ENSHGLG00100004708	SCAF8	100	86.392	ENSPCIG00000001141	SCAF8	100	85.871	Phascolarctos_cinereus
ENSHGLG00100004708	SCAF8	91	68.250	ENSPFOG00000004176	SCAF8	99	54.330	Poecilia_formosa
ENSHGLG00100004708	SCAF8	91	68.250	ENSPLAG00000021432	SCAF8	77	67.750	Poecilia_latipinna
ENSHGLG00100004708	SCAF8	86	68.250	ENSPMEG00000007591	SCAF8	84	67.313	Poecilia_mexicana
ENSHGLG00100004708	SCAF8	86	68.250	ENSPREG00000000652	SCAF8	77	67.750	Poecilia_reticulata
ENSHGLG00100004708	SCAF8	100	93.908	ENSPPYG00000017121	SCAF8	100	93.014	Pongo_abelii
ENSHGLG00100004708	SCAF8	85	96.934	ENSPCAG00000013044	SCAF8	89	96.934	Procavia_capensis
ENSHGLG00100004708	SCAF8	100	94.458	ENSPCOG00000002067	SCAF8	99	94.299	Propithecus_coquereli
ENSHGLG00100004708	SCAF8	98	90.499	ENSPVAG00000005582	SCAF8	100	91.054	Pteropus_vampyrus
ENSHGLG00100004708	SCAF8	87	68.889	ENSPNYG00000007277	SCAF8	79	68.480	Pundamilia_nyererei
ENSHGLG00100004708	SCAF8	86	67.906	ENSPNAG00000024740	SCAF8	81	68.154	Pygocentrus_nattereri
ENSHGLG00100004708	SCAF8	100	91.118	ENSRNOG00000016919	Scaf8	100	90.559	Rattus_norvegicus
ENSHGLG00100004708	SCAF8	100	95.800	ENSRBIG00000035769	SCAF8	100	95.204	Rhinopithecus_bieti
ENSHGLG00100004708	SCAF8	100	95.721	ENSRROG00000013580	SCAF8	100	95.126	Rhinopithecus_roxellana
ENSHGLG00100004708	SCAF8	100	95.008	ENSSBOG00000027023	SCAF8	100	94.418	Saimiri_boliviensis_boliviensis
ENSHGLG00100004708	SCAF8	100	85.929	ENSSHAG00000009915	SCAF8	100	85.412	Sarcophilus_harrisii
ENSHGLG00100004708	SCAF8	100	53.810	ENSSFOG00015009481	SCAF8	92	68.649	Scleropages_formosus
ENSHGLG00100004708	SCAF8	87	67.640	ENSSMAG00000008275	SCAF8	77	66.346	Scophthalmus_maximus
ENSHGLG00100004708	SCAF8	100	77.052	ENSSPUG00000015219	SCAF8	100	76.395	Sphenodon_punctatus
ENSHGLG00100004708	SCAF8	100	94.216	ENSSSCG00000004070	SCAF8	100	94.146	Sus_scrofa
ENSHGLG00100004708	SCAF8	100	79.717	ENSTGUG00000011151	SCAF8	99	79.953	Taeniopygia_guttata
ENSHGLG00100004708	SCAF8	86	67.250	ENSTRUG00000009243	SCAF8	77	67.250	Takifugu_rubripes
ENSHGLG00100004708	SCAF8	87	65.043	ENSTNIG00000016885	SCAF8	99	65.164	Tetraodon_nigroviridis
ENSHGLG00100004708	SCAF8	100	93.582	ENSTTRG00000014538	SCAF8	100	93.582	Tursiops_truncatus
ENSHGLG00100004708	SCAF8	100	94.057	ENSUAMG00000024736	SCAF8	99	94.057	Ursus_americanus
ENSHGLG00100004708	SCAF8	99	94.066	ENSUMAG00000013404	SCAF8	100	94.066	Ursus_maritimus
ENSHGLG00100004708	SCAF8	67	84.302	ENSVPAG00000012465	SCAF8	99	83.834	Vicugna_pacos
ENSHGLG00100004708	SCAF8	100	94.612	ENSVVUG00000007532	SCAF8	100	94.547	Vulpes_vulpes
ENSHGLG00100004708	SCAF8	100	61.581	ENSXETG00000013132	scaf8	99	61.520	Xenopus_tropicalis
ENSHGLG00100004708	SCAF8	91	68.250	ENSXMAG00000019192	SCAF8	77	67.875	Xiphophorus_maculatus