EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 3408 bases
Position: chrJH168597.1:1513-4920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006508	EST1	PF10374.9	1.4e-24	1	1
ENSHGLP00100006508	EST1_DNA_bind	PF10373.9	4.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006595	-	3267	-	ENSHGLP00100006508	1088 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004878	-	98	91.351	ENSHGLG00100009637	-	100	91.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004878	-	99	89.144	ENSG00000116698	SMG7	100	89.947	Homo_sapiens
ENSHGLG00100004878	-	70	65.906	ENSAPOG00000009611	smg7	94	65.385	Acanthochromis_polyacanthus
ENSHGLG00100004878	-	96	84.541	ENSAMEG00000002357	SMG7	100	84.454	Ailuropoda_melanoleuca
ENSHGLG00100004878	-	97	54.460	ENSACIG00000015152	smg7	100	54.715	Amphilophus_citrinellus
ENSHGLG00100004878	-	99	59.143	ENSAOCG00000013538	smg7	99	59.524	Amphiprion_ocellaris
ENSHGLG00100004878	-	99	59.012	ENSAPEG00000007851	smg7	99	59.393	Amphiprion_percula
ENSHGLG00100004878	-	99	56.967	ENSATEG00000006931	smg7	99	57.377	Anabas_testudineus
ENSHGLG00100004878	-	100	74.769	ENSAPLG00000015811	SMG7	100	74.602	Anas_platyrhynchos
ENSHGLG00100004878	-	100	78.028	ENSACAG00000014989	SMG7	100	75.732	Anolis_carolinensis
ENSHGLG00100004878	-	97	89.040	ENSANAG00000028114	SMG7	94	89.040	Aotus_nancymaae
ENSHGLG00100004878	-	99	59.042	ENSACLG00000022079	smg7	99	59.323	Astatotilapia_calliptera
ENSHGLG00100004878	-	99	60.418	ENSAMXG00000020809	smg7	99	60.702	Astyanax_mexicanus
ENSHGLG00100004878	-	99	87.908	ENSBTAG00000008003	SMG7	97	87.908	Bos_taurus
ENSHGLG00100004878	-	99	88.879	ENSCJAG00000005135	SMG7	97	88.879	Callithrix_jacchus
ENSHGLG00100004878	-	99	88.438	ENSCAFG00000013276	SMG7	97	88.614	Canis_familiaris
ENSHGLG00100004878	-	99	88.438	ENSCAFG00020015475	SMG7	97	88.614	Canis_lupus_dingo
ENSHGLG00100004878	-	99	88.095	ENSCHIG00000018192	SMG7	99	88.095	Capra_hircus
ENSHGLG00100004878	-	99	88.614	ENSTSYG00000002667	SMG7	97	88.614	Carlito_syrichta
ENSHGLG00100004878	-	99	89.673	ENSCPOG00000008906	SMG7	99	89.144	Cavia_porcellus
ENSHGLG00100004878	-	100	82.140	ENSCCAG00000028596	SMG7	100	82.620	Cebus_capucinus
ENSHGLG00100004878	-	99	89.232	ENSCATG00000011063	SMG7	97	89.232	Cercocebus_atys
ENSHGLG00100004878	-	100	89.746	ENSCLAG00000010751	SMG7	100	89.746	Chinchilla_lanigera
ENSHGLG00100004878	-	99	89.056	ENSCSAG00000012654	SMG7	97	89.056	Chlorocebus_sabaeus
ENSHGLG00100004878	-	91	81.202	ENSCHOG00000010522	SMG7	93	81.662	Choloepus_hoffmanni
ENSHGLG00100004878	-	100	81.092	ENSCPBG00000015724	SMG7	100	80.924	Chrysemys_picta_bellii
ENSHGLG00100004878	-	96	85.502	ENSCANG00000015680	SMG7	100	83.057	Colobus_angolensis_palliatus
ENSHGLG00100004878	-	100	88.081	ENSCGRG00001013705	Smg7	100	88.081	Cricetulus_griseus_chok1gshd
ENSHGLG00100004878	-	99	87.908	ENSCGRG00000018401	Smg7	99	87.908	Cricetulus_griseus_crigri
ENSHGLG00100004878	-	98	57.583	ENSCVAG00000011842	smg7	98	59.106	Cyprinodon_variegatus
ENSHGLG00100004878	-	99	60.783	ENSDARG00000060767	smg7	99	61.314	Danio_rerio
ENSHGLG00100004878	-	100	88.168	ENSDORG00000007331	Smg7	100	88.168	Dipodomys_ordii
ENSHGLG00100004878	-	97	87.228	ENSETEG00000002654	SMG7	100	87.228	Echinops_telfairi
ENSHGLG00100004878	-	100	89.220	ENSEASG00005006524	SMG7	100	89.220	Equus_asinus_asinus
ENSHGLG00100004878	-	100	89.308	ENSECAG00000004313	SMG7	100	89.308	Equus_caballus
ENSHGLG00100004878	-	97	87.240	ENSEEUG00000002024	SMG7	94	87.240	Erinaceus_europaeus
ENSHGLG00100004878	-	92	70.103	ENSELUG00000010293	smg7	99	58.780	Esox_lucius
ENSHGLG00100004878	-	100	88.782	ENSFCAG00000010900	SMG7	100	88.957	Felis_catus
ENSHGLG00100004878	-	98	75.660	ENSFALG00000003047	SMG7	99	75.574	Ficedula_albicollis
ENSHGLG00100004878	-	99	89.991	ENSFDAG00000012121	SMG7	99	90.374	Fukomys_damarensis
ENSHGLG00100004878	-	99	55.993	ENSFHEG00000011073	smg7	99	56.100	Fundulus_heteroclitus
ENSHGLG00100004878	-	88	62.500	ENSGMOG00000004916	smg7	92	62.592	Gadus_morhua
ENSHGLG00100004878	-	100	75.209	ENSGALG00000004667	SMG7	100	75.042	Gallus_gallus
ENSHGLG00100004878	-	99	55.278	ENSGAFG00000019000	smg7	99	55.333	Gambusia_affinis
ENSHGLG00100004878	-	97	59.615	ENSGACG00000001634	smg7	99	59.738	Gasterosteus_aculeatus
ENSHGLG00100004878	-	99	88.967	ENSGGOG00000002342	SMG7	97	88.967	Gorilla_gorilla
ENSHGLG00100004878	-	99	59.042	ENSHBUG00000003726	smg7	97	61.929	Haplochromis_burtoni
ENSHGLG00100004878	-	98	91.176	ENSHGLG00000009353	SMG7	100	91.176	Heterocephalus_glaber_female
ENSHGLG00100004878	-	99	61.293	ENSIPUG00000016997	smg7	99	61.461	Ictalurus_punctatus
ENSHGLG00100004878	-	100	89.395	ENSSTOG00000000401	SMG7	100	89.395	Ictidomys_tridecemlineatus
ENSHGLG00100004878	-	100	87.292	ENSJJAG00000012351	Smg7	100	87.292	Jaculus_jaculus
ENSHGLG00100004878	-	88	57.277	ENSKMAG00000004900	smg7	96	59.000	Kryptolebias_marmoratus
ENSHGLG00100004878	-	99	56.406	ENSLBEG00000002983	smg7	99	56.988	Labrus_bergylta
ENSHGLG00100004878	-	99	68.631	ENSLACG00000000972	SMG7	99	68.604	Latimeria_chalumnae
ENSHGLG00100004878	-	99	61.730	ENSLOCG00000002010	smg7	99	61.897	Lepisosteus_oculatus
ENSHGLG00100004878	-	99	88.428	ENSLAFG00000008186	SMG7	99	88.428	Loxodonta_africana
ENSHGLG00100004878	-	100	89.308	ENSMFAG00000031653	SMG7	100	89.308	Macaca_fascicularis
ENSHGLG00100004878	-	99	89.232	ENSMMUG00000018458	SMG7	97	89.232	Macaca_mulatta
ENSHGLG00100004878	-	100	82.140	ENSMNEG00000034798	SMG7	100	83.144	Macaca_nemestrina
ENSHGLG00100004878	-	99	89.232	ENSMLEG00000037170	SMG7	97	89.232	Mandrillus_leucophaeus
ENSHGLG00100004878	-	87	57.841	ENSMAMG00000018733	smg7	85	58.026	Mastacembelus_armatus
ENSHGLG00100004878	-	99	58.930	ENSMZEG00005015247	smg7	99	59.095	Maylandia_zebra
ENSHGLG00100004878	-	97	74.721	ENSMGAG00000001561	SMG7	99	74.704	Meleagris_gallopavo
ENSHGLG00100004878	-	100	88.431	ENSMAUG00000019484	Smg7	100	88.431	Mesocricetus_auratus
ENSHGLG00100004878	-	99	89.056	ENSMICG00000007145	SMG7	99	89.056	Microcebus_murinus
ENSHGLG00100004878	-	100	88.256	ENSMOCG00000020748	Smg7	100	88.256	Microtus_ochrogaster
ENSHGLG00100004878	-	99	55.046	ENSMMOG00000001524	smg7	99	55.250	Mola_mola
ENSHGLG00100004878	-	92	77.536	ENSMODG00000007139	SMG7	99	77.536	Monodelphis_domestica
ENSHGLG00100004878	-	99	58.134	ENSMALG00000000061	smg7	91	61.607	Monopterus_albus
ENSHGLG00100004878	-	100	88.168	MGP_CAROLIEiJ_G0014704	Smg7	100	88.168	Mus_caroli
ENSHGLG00100004878	-	100	88.060	ENSMUSG00000042772	Smg7	100	88.060	Mus_musculus
ENSHGLG00100004878	-	100	87.993	MGP_PahariEiJ_G0027940	Smg7	100	87.993	Mus_pahari
ENSHGLG00100004878	-	100	88.147	MGP_SPRETEiJ_G0015511	Smg7	100	88.147	Mus_spretus
ENSHGLG00100004878	-	98	88.503	ENSMPUG00000011732	SMG7	97	88.681	Mustela_putorius_furo
ENSHGLG00100004878	-	99	88.261	ENSMLUG00000015417	SMG7	99	88.261	Myotis_lucifugus
ENSHGLG00100004878	-	99	88.085	ENSNGAG00000009836	Smg7	99	88.085	Nannospalax_galili
ENSHGLG00100004878	-	98	52.525	ENSNBRG00000024343	smg7	98	60.476	Neolamprologus_brichardi
ENSHGLG00100004878	-	99	89.232	ENSNLEG00000018018	SMG7	97	89.232	Nomascus_leucogenys
ENSHGLG00100004878	-	78	80.286	ENSMEUG00000004681	SMG7	75	80.286	Notamacropus_eugenii
ENSHGLG00100004878	-	96	76.530	ENSOPRG00000013942	SMG7	96	76.256	Ochotona_princeps
ENSHGLG00100004878	-	100	90.009	ENSODEG00000010390	SMG7	100	90.009	Octodon_degus
ENSHGLG00100004878	-	99	56.410	ENSONIG00000000277	smg7	99	56.694	Oreochromis_niloticus
ENSHGLG00100004878	-	98	83.052	ENSOANG00000000994	SMG7	99	83.319	Ornithorhynchus_anatinus
ENSHGLG00100004878	-	99	82.171	ENSOCUG00000005887	SMG7	92	82.348	Oryctolagus_cuniculus
ENSHGLG00100004878	-	99	56.784	ENSORLG00000007314	smg7	70	88.158	Oryzias_latipes
ENSHGLG00100004878	-	99	57.155	ENSORLG00020015779	smg7	70	88.158	Oryzias_latipes_hni
ENSHGLG00100004878	-	99	58.977	ENSORLG00015012289	smg7	99	57.298	Oryzias_latipes_hsok
ENSHGLG00100004878	-	99	56.761	ENSOMEG00000002328	smg7	99	56.845	Oryzias_melastigma
ENSHGLG00100004878	-	99	85.877	ENSOGAG00000003107	SMG7	94	88.305	Otolemur_garnettii
ENSHGLG00100004878	-	99	88.085	ENSOARG00000001352	SMG7	97	88.085	Ovis_aries
ENSHGLG00100004878	-	100	82.140	ENSPPAG00000031619	SMG7	100	83.144	Pan_paniscus
ENSHGLG00100004878	-	99	88.703	ENSPPRG00000011222	SMG7	97	88.879	Panthera_pardus
ENSHGLG00100004878	-	96	88.605	ENSPTIG00000007242	SMG7	100	84.541	Panthera_tigris_altaica
ENSHGLG00100004878	-	97	89.312	ENSPTRG00000001764	SMG7	94	89.312	Pan_troglodytes
ENSHGLG00100004878	-	99	89.232	ENSPANG00000004520	SMG7	97	89.232	Papio_anubis
ENSHGLG00100004878	-	99	57.948	ENSPKIG00000007242	smg7	99	60.000	Paramormyrops_kingsleyae
ENSHGLG00100004878	-	99	83.848	ENSPSIG00000012201	SMG7	99	83.672	Pelodiscus_sinensis
ENSHGLG00100004878	-	54	47.692	ENSPMGG00000021833	smg7	89	45.729	Periophthalmus_magnuspinnatus
ENSHGLG00100004878	-	100	87.555	ENSPEMG00000011315	Smg7	100	87.555	Peromyscus_maniculatus_bairdii
ENSHGLG00100004878	-	100	82.660	ENSPCIG00000003786	SMG7	92	92.727	Phascolarctos_cinereus
ENSHGLG00100004878	-	99	57.475	ENSPFOG00000019219	smg7	99	57.960	Poecilia_formosa
ENSHGLG00100004878	-	99	55.454	ENSPLAG00000001446	smg7	99	55.657	Poecilia_latipinna
ENSHGLG00100004878	-	96	54.725	ENSPMEG00000005218	smg7	99	54.936	Poecilia_mexicana
ENSHGLG00100004878	-	89	54.206	ENSPREG00000019039	smg7	90	55.352	Poecilia_reticulata
ENSHGLG00100004878	-	100	82.224	ENSPPYG00000000427	SMG7	100	82.224	Pongo_abelii
ENSHGLG00100004878	-	96	77.828	ENSPCAG00000008360	SMG7	95	77.828	Procavia_capensis
ENSHGLG00100004878	-	99	89.144	ENSPCOG00000011996	SMG7	97	89.144	Propithecus_coquereli
ENSHGLG00100004878	-	91	83.923	ENSPVAG00000000851	SMG7	89	83.923	Pteropus_vampyrus
ENSHGLG00100004878	-	99	58.974	ENSPNYG00000007643	smg7	99	59.421	Pundamilia_nyererei
ENSHGLG00100004878	-	99	60.935	ENSPNAG00000011374	smg7	99	60.935	Pygocentrus_nattereri
ENSHGLG00100004878	-	100	87.916	ENSRNOG00000027962	Smg7	100	88.624	Rattus_norvegicus
ENSHGLG00100004878	-	99	89.144	ENSRBIG00000036316	SMG7	97	89.144	Rhinopithecus_bieti
ENSHGLG00100004878	-	100	89.308	ENSRROG00000035719	SMG7	100	89.308	Rhinopithecus_roxellana
ENSHGLG00100004878	-	100	89.132	ENSSBOG00000023454	SMG7	100	89.132	Saimiri_boliviensis_boliviensis
ENSHGLG00100004878	-	100	78.301	ENSSHAG00000013147	SMG7	100	78.049	Sarcophilus_harrisii
ENSHGLG00100004878	-	99	60.756	ENSSFOG00015017252	smg7	99	63.492	Scleropages_formosus
ENSHGLG00100004878	-	99	58.624	ENSSMAG00000006067	smg7	99	59.038	Scophthalmus_maximus
ENSHGLG00100004878	-	95	65.369	ENSSDUG00000017543	smg7	99	56.628	Seriola_dumerili
ENSHGLG00100004878	-	99	76.058	ENSSPUG00000002064	SMG7	99	75.888	Sphenodon_punctatus
ENSHGLG00100004878	-	100	55.546	ENSSPAG00000008733	smg7	100	55.887	Stegastes_partitus
ENSHGLG00100004878	-	100	89.045	ENSSSCG00000015558	SMG7	100	89.045	Sus_scrofa
ENSHGLG00100004878	-	99	75.105	ENSTGUG00000003928	SMG7	100	75.021	Taeniopygia_guttata
ENSHGLG00100004878	-	99	58.179	ENSTNIG00000002802	smg7	99	58.263	Tetraodon_nigroviridis
ENSHGLG00100004878	-	77	85.193	ENSTBEG00000003220	SMG7	75	85.622	Tupaia_belangeri
ENSHGLG00100004878	-	96	88.493	ENSTTRG00000014778	SMG7	94	88.493	Tursiops_truncatus
ENSHGLG00100004878	-	96	84.167	ENSUAMG00000017473	SMG7	100	84.076	Ursus_americanus
ENSHGLG00100004878	-	96	88.717	ENSUMAG00000016389	SMG7	100	88.899	Ursus_maritimus
ENSHGLG00100004878	-	100	88.694	ENSVVUG00000008976	SMG7	100	88.869	Vulpes_vulpes
ENSHGLG00100004878	-	100	59.884	ENSXETG00000012528	smg7	100	60.017	Xenopus_tropicalis
ENSHGLG00100004878	-	99	55.399	ENSXMAG00000007123	smg7	99	55.758	Xiphophorus_maculatus