EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004881 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 720 bases
Position: chrJH172330.1:74627-75346
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006510	LSM	PF01423.22	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006598	-	681	-	ENSHGLP00100006510	226 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004881	-	92	75.566	ENSHGLG00100012877	-	100	77.922
ENSHGLG00100004881	-	88	78.774	ENSHGLG00100021056	-	100	79.498
ENSHGLG00100004881	-	88	83.099	ENSHGLG00100016559	SNRPN	100	82.917
ENSHGLG00100004881	-	61	71.333	ENSHGLG00100004178	-	72	71.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004881	-	88	83.099	ENSG00000128739	SNRPN	100	94.915	Homo_sapiens
ENSHGLG00100004881	-	91	82.727	ENSAMEG00000007034	SNRPN	98	82.427	Ailuropoda_melanoleuca
ENSHGLG00100004881	-	95	83.772	ENSANAG00000034241	SNRPN	100	82.917	Aotus_nancymaae
ENSHGLG00100004881	-	92	82.353	ENSBTAG00000008251	SNRPN	100	81.667	Bos_taurus
ENSHGLG00100004881	-	88	83.099	ENSCJAG00000042622	-	94	76.667	Callithrix_jacchus
ENSHGLG00100004881	-	88	83.099	ENSCJAG00000003759	-	100	82.917	Callithrix_jacchus
ENSHGLG00100004881	-	92	82.805	ENSCAFG00000010127	SNRPN	100	82.500	Canis_familiaris
ENSHGLG00100004881	-	92	83.258	ENSCAFG00020024075	SNRPN	100	82.500	Canis_lupus_dingo
ENSHGLG00100004881	-	95	82.533	ENSCHIG00000017477	SNRPN	100	81.667	Capra_hircus
ENSHGLG00100004881	-	88	83.099	ENSTSYG00000005248	SNRPN	100	82.917	Carlito_syrichta
ENSHGLG00100004881	-	88	83.099	ENSCAPG00000003047	SNRPN	100	82.917	Cavia_aperea
ENSHGLG00100004881	-	88	83.099	ENSCPOG00000020270	SNRPN	100	82.917	Cavia_porcellus
ENSHGLG00100004881	-	88	83.099	ENSCCAG00000024231	SNRPN	100	82.917	Cebus_capucinus
ENSHGLG00100004881	-	88	83.099	ENSCATG00000032518	SNRPN	100	82.917	Cercocebus_atys
ENSHGLG00100004881	-	88	83.099	ENSCLAG00000011376	SNRPN	100	82.917	Chinchilla_lanigera
ENSHGLG00100004881	-	88	83.099	ENSCSAG00000006406	SNRPN	100	82.917	Chlorocebus_sabaeus
ENSHGLG00100004881	-	85	82.126	ENSCHOG00000001846	SNRPN	88	81.624	Choloepus_hoffmanni
ENSHGLG00100004881	-	88	83.099	ENSCANG00000041156	SNRPN	100	82.917	Colobus_angolensis_palliatus
ENSHGLG00100004881	-	88	82.629	ENSCGRG00001004136	Snrpn	100	82.500	Cricetulus_griseus_chok1gshd
ENSHGLG00100004881	-	88	82.160	ENSCGRG00000001621	Snrpn	100	82.083	Cricetulus_griseus_crigri
ENSHGLG00100004881	-	70	79.070	ENSCVAG00000014193	SNRPN	99	74.477	Cyprinodon_variegatus
ENSHGLG00100004881	-	88	82.075	ENSDNOG00000037060	SNRPN	98	82.008	Dasypus_novemcinctus
ENSHGLG00100004881	-	88	82.629	ENSDORG00000004527	Snrpn	100	82.500	Dipodomys_ordii
ENSHGLG00100004881	-	92	82.805	ENSEASG00005017871	SNRPN	100	82.500	Equus_asinus_asinus
ENSHGLG00100004881	-	92	82.805	ENSECAG00000018148	SNRPN	100	82.500	Equus_caballus
ENSHGLG00100004881	-	91	81.818	ENSEEUG00000007440	-	100	81.590	Erinaceus_europaeus
ENSHGLG00100004881	-	95	83.406	ENSFCAG00000022298	-	100	82.500	Felis_catus
ENSHGLG00100004881	-	79	71.875	ENSFDAG00000010528	-	100	70.616	Fukomys_damarensis
ENSHGLG00100004881	-	88	82.629	ENSFDAG00000016578	-	100	82.500	Fukomys_damarensis
ENSHGLG00100004881	-	72	64.773	ENSGMOG00000018161	SNRPN	99	57.322	Gadus_morhua
ENSHGLG00100004881	-	89	63.551	ENSGGOG00000024469	-	95	63.462	Gorilla_gorilla
ENSHGLG00100004881	-	88	83.099	ENSGGOG00000003988	SNRPN	100	82.917	Gorilla_gorilla
ENSHGLG00100004881	-	88	83.099	ENSHGLG00000011924	SNRPN	100	82.917	Heterocephalus_glaber_female
ENSHGLG00100004881	-	88	78.774	ENSHGLG00000019812	-	100	79.498	Heterocephalus_glaber_female
ENSHGLG00100004881	-	100	98.238	ENSHGLG00000002327	-	100	98.238	Heterocephalus_glaber_female
ENSHGLG00100004881	-	92	70.909	ENSHGLG00000020936	-	100	71.967	Heterocephalus_glaber_female
ENSHGLG00100004881	-	88	83.099	ENSSTOG00000001339	SNRPN	100	82.917	Ictidomys_tridecemlineatus
ENSHGLG00100004881	-	88	82.547	ENSLAFG00000009458	SNRPN	99	82.427	Loxodonta_africana
ENSHGLG00100004881	-	88	83.099	ENSMFAG00000042235	SNRPN	100	82.917	Macaca_fascicularis
ENSHGLG00100004881	-	88	83.099	ENSMMUG00000023139	SNURF	100	82.917	Macaca_mulatta
ENSHGLG00100004881	-	88	83.099	ENSMNEG00000031291	SNRPN	100	82.917	Macaca_nemestrina
ENSHGLG00100004881	-	88	83.099	ENSMLEG00000038837	SNRPN	100	82.917	Mandrillus_leucophaeus
ENSHGLG00100004881	-	91	69.545	ENSMGAG00000008696	SNRPN	98	72.881	Meleagris_gallopavo
ENSHGLG00100004881	-	88	83.099	ENSMAUG00000000051	Snrpn	100	82.917	Mesocricetus_auratus
ENSHGLG00100004881	-	88	83.099	ENSMICG00000042356	SNRPN	100	82.917	Microcebus_murinus
ENSHGLG00100004881	-	88	83.099	ENSMOCG00000015350	Snrpn	100	82.917	Microtus_ochrogaster
ENSHGLG00100004881	-	92	76.923	ENSMODG00000013926	-	100	78.750	Monodelphis_domestica
ENSHGLG00100004881	-	88	83.099	MGP_CAROLIEiJ_G0029815	Snrpn	100	82.917	Mus_caroli
ENSHGLG00100004881	-	88	83.099	ENSMUSG00000102252	Snrpn	100	82.917	Mus_musculus
ENSHGLG00100004881	-	88	83.099	MGP_PahariEiJ_G0013040	Snrpn	100	82.917	Mus_pahari
ENSHGLG00100004881	-	88	83.099	MGP_SPRETEiJ_G0030918	Snrpn	100	82.917	Mus_spretus
ENSHGLG00100004881	-	87	41.748	ENSMPUG00000007115	-	60	54.887	Mustela_putorius_furo
ENSHGLG00100004881	-	92	82.805	ENSMPUG00000014638	-	100	82.500	Mustela_putorius_furo
ENSHGLG00100004881	-	57	68.939	ENSMLUG00000024428	-	64	68.217	Myotis_lucifugus
ENSHGLG00100004881	-	95	56.364	ENSMLUG00000025849	-	100	56.364	Myotis_lucifugus
ENSHGLG00100004881	-	91	82.273	ENSMLUG00000023361	-	98	82.008	Myotis_lucifugus
ENSHGLG00100004881	-	88	83.099	ENSNGAG00000000181	Snrpn	100	82.917	Nannospalax_galili
ENSHGLG00100004881	-	88	65.258	ENSNLEG00000001376	SNRPN	99	66.250	Nomascus_leucogenys
ENSHGLG00100004881	-	97	73.932	ENSODEG00000016065	-	99	70.815	Octodon_degus
ENSHGLG00100004881	-	88	82.629	ENSODEG00000013478	-	100	82.500	Octodon_degus
ENSHGLG00100004881	-	88	82.160	ENSODEG00000019708	-	95	75.833	Octodon_degus
ENSHGLG00100004881	-	88	82.629	ENSODEG00000020110	-	100	82.500	Octodon_degus
ENSHGLG00100004881	-	88	83.178	ENSOCUG00000003532	-	100	82.158	Oryctolagus_cuniculus
ENSHGLG00100004881	-	73	78.090	ENSORLG00020007490	SNRPN	99	74.895	Oryzias_latipes_hni
ENSHGLG00100004881	-	73	78.090	ENSORLG00015003332	SNRPN	99	74.895	Oryzias_latipes_hsok
ENSHGLG00100004881	-	73	77.528	ENSOMEG00000002066	SNRPN	99	75.314	Oryzias_melastigma
ENSHGLG00100004881	-	88	83.099	ENSOGAG00000007392	SNRPN	100	82.917	Otolemur_garnettii
ENSHGLG00100004881	-	92	81.900	ENSOARG00000009080	SNRPN	100	81.667	Ovis_aries
ENSHGLG00100004881	-	92	62.443	ENSPPAG00000034049	-	92	59.149	Pan_paniscus
ENSHGLG00100004881	-	88	83.099	ENSPPAG00000027650	SNRPN	100	82.917	Pan_paniscus
ENSHGLG00100004881	-	92	82.805	ENSPPRG00000019878	-	100	82.500	Panthera_pardus
ENSHGLG00100004881	-	85	56.000	ENSPPRG00000006957	-	63	60.156	Panthera_pardus
ENSHGLG00100004881	-	95	81.659	ENSPTIG00000004537	SNRPN	100	82.917	Panthera_tigris_altaica
ENSHGLG00100004881	-	88	83.099	ENSPTRG00000006826	SNRPN	100	82.917	Pan_troglodytes
ENSHGLG00100004881	-	92	62.443	ENSPTRG00000052400	-	92	59.149	Pan_troglodytes
ENSHGLG00100004881	-	88	83.099	ENSPANG00000020142	SNRPN	100	82.917	Papio_anubis
ENSHGLG00100004881	-	88	78.873	ENSPEMG00000020979	-	100	78.750	Peromyscus_maniculatus_bairdii
ENSHGLG00100004881	-	88	83.099	ENSPEMG00000012911	-	100	82.917	Peromyscus_maniculatus_bairdii
ENSHGLG00100004881	-	88	77.451	ENSPEMG00000013920	-	100	77.056	Peromyscus_maniculatus_bairdii
ENSHGLG00100004881	-	74	79.670	ENSPCIG00000004699	-	76	78.243	Phascolarctos_cinereus
ENSHGLG00100004881	-	70	77.326	ENSPMEG00000020674	SNRPN	99	75.314	Poecilia_mexicana
ENSHGLG00100004881	-	88	83.099	ENSPPYG00000006269	SNURF	100	82.917	Pongo_abelii
ENSHGLG00100004881	-	95	83.772	ENSPCOG00000014231	SNRPN	100	82.917	Propithecus_coquereli
ENSHGLG00100004881	-	88	83.099	ENSRNOG00000059764	Snrpn	100	82.917	Rattus_norvegicus
ENSHGLG00100004881	-	88	83.099	ENSRBIG00000041765	SNRPN	100	82.917	Rhinopithecus_bieti
ENSHGLG00100004881	-	88	83.099	ENSRROG00000035157	SNRPN	100	82.917	Rhinopithecus_roxellana
ENSHGLG00100004881	-	92	83.258	ENSSBOG00000024929	-	100	82.500	Saimiri_boliviensis_boliviensis
ENSHGLG00100004881	-	88	83.099	ENSSBOG00000000110	-	100	82.917	Saimiri_boliviensis_boliviensis
ENSHGLG00100004881	-	75	79.235	ENSSHAG00000010257	-	98	77.917	Sarcophilus_harrisii
ENSHGLG00100004881	-	96	82.684	ENSSSCG00000028124	SNRPN	100	82.083	Sus_scrofa
ENSHGLG00100004881	-	92	81.900	ENSTTRG00000010966	SNRPN	89	81.667	Tursiops_truncatus
ENSHGLG00100004881	-	92	83.408	ENSUAMG00000016284	SNRPN	78	82.063	Ursus_americanus
ENSHGLG00100004881	-	92	82.805	ENSUMAG00000025589	SNRPN	100	82.500	Ursus_maritimus
ENSHGLG00100004881	-	95	83.406	ENSVVUG00000017971	SNRPN	94	82.969	Vulpes_vulpes