EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100004977 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 2644 bases
Position: chrJH172220.1:99424-102067
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006635	DND1_DSRM	PF14709.7	3e-15	1	1
ENSHGLP00100006635	RRM_1	PF00076.22	3.4e-30	1	3
ENSHGLP00100006635	RRM_1	PF00076.22	3.4e-30	2	3
ENSHGLP00100006635	RRM_1	PF00076.22	3.4e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006725	-	1461	-	ENSHGLP00100006635	486 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100004977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100004977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100004977	-	58	59.122	ENSHGLG00100003071	-	53	58.108
ENSHGLG00100004977	-	86	59.740	ENSHGLG00100000518	A1CF	65	59.416
ENSHGLG00100004977	-	57	47.535	ENSHGLG00100009598	-	57	45.724
ENSHGLG00100004977	-	62	45.538	ENSHGLG00100008473	-	51	45.231
ENSHGLG00100004977	-	100	60.038	ENSHGLG00100018987	-	100	60.038
ENSHGLG00100004977	-	97	73.592	ENSHGLG00100012752	-	94	81.136
ENSHGLG00100004977	-	56	48.454	ENSHGLG00100013302	SYNCRIP	52	47.119
ENSHGLG00100004977	-	58	63.851	ENSHGLG00100014028	-	84	67.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100004977	-	99	75.954	ENSG00000151962	RBM46	100	89.474	Homo_sapiens
ENSHGLG00100004977	-	83	56.335	ENSAPOG00000009209	rbm46	84	56.335	Acanthochromis_polyacanthus
ENSHGLG00100004977	-	99	76.527	ENSAMEG00000013290	RBM46	97	77.481	Ailuropoda_melanoleuca
ENSHGLG00100004977	-	84	54.353	ENSACIG00000014500	rbm46	81	54.098	Amphilophus_citrinellus
ENSHGLG00100004977	-	80	60.197	ENSAOCG00000001892	-	80	59.214	Amphiprion_ocellaris
ENSHGLG00100004977	-	80	60.197	ENSAPEG00000017762	rbm46	90	59.214	Amphiprion_percula
ENSHGLG00100004977	-	83	58.234	ENSATEG00000010775	rbm46	80	58.950	Anabas_testudineus
ENSHGLG00100004977	-	86	72.273	ENSAPLG00000005116	RBM46	94	72.727	Anas_platyrhynchos
ENSHGLG00100004977	-	99	69.524	ENSACAG00000015599	RBM46	97	69.905	Anolis_carolinensis
ENSHGLG00100004977	-	99	74.618	ENSANAG00000029193	RBM46	94	82.273	Aotus_nancymaae
ENSHGLG00100004977	-	82	56.909	ENSACLG00000016153	rbm46	76	57.343	Astatotilapia_calliptera
ENSHGLG00100004977	-	94	50.489	ENSAMXG00000020892	-	96	50.489	Astyanax_mexicanus
ENSHGLG00100004977	-	81	62.019	ENSAMXG00000009397	rbm46	91	61.058	Astyanax_mexicanus
ENSHGLG00100004977	-	86	82.273	ENSBTAG00000001696	RBM46	91	82.727	Bos_taurus
ENSHGLG00100004977	-	99	75.728	ENSCJAG00000001768	RBM46	94	82.045	Callithrix_jacchus
ENSHGLG00100004977	-	99	76.046	ENSCAFG00000008473	RBM46	91	83.864	Canis_familiaris
ENSHGLG00100004977	-	99	76.046	ENSCAFG00020002468	RBM46	97	76.996	Canis_lupus_dingo
ENSHGLG00100004977	-	99	74.618	ENSCHIG00000000502	RBM46	91	82.045	Capra_hircus
ENSHGLG00100004977	-	86	82.500	ENSTSYG00000010435	RBM46	94	82.955	Carlito_syrichta
ENSHGLG00100004977	-	86	81.591	ENSCAPG00000011928	-	91	82.045	Cavia_aperea
ENSHGLG00100004977	-	72	79.730	ENSCAPG00000011841	-	99	80.488	Cavia_aperea
ENSHGLG00100004977	-	97	75.152	ENSCPOG00000020396	-	99	75.301	Cavia_porcellus
ENSHGLG00100004977	-	99	72.727	ENSCPOG00000019272	-	97	73.106	Cavia_porcellus
ENSHGLG00100004977	-	99	74.427	ENSCPOG00000010284	-	94	82.045	Cavia_porcellus
ENSHGLG00100004977	-	99	75.382	ENSCCAG00000027619	-	94	82.955	Cebus_capucinus
ENSHGLG00100004977	-	99	64.881	ENSCCAG00000001323	-	97	64.811	Cebus_capucinus
ENSHGLG00100004977	-	86	82.955	ENSCATG00000040148	RBM46	94	83.409	Cercocebus_atys
ENSHGLG00100004977	-	99	74.187	ENSCLAG00000005846	-	94	82.273	Chinchilla_lanigera
ENSHGLG00100004977	-	100	76.527	ENSCLAG00000011886	-	100	76.908	Chinchilla_lanigera
ENSHGLG00100004977	-	99	75.954	ENSCSAG00000003263	RBM46	97	76.336	Chlorocebus_sabaeus
ENSHGLG00100004977	-	99	74.952	ENSCHOG00000003429	RBM46	97	75.763	Choloepus_hoffmanni
ENSHGLG00100004977	-	86	78.636	ENSCPBG00000009314	RBM46	96	79.091	Chrysemys_picta_bellii
ENSHGLG00100004977	-	86	82.955	ENSCANG00000039065	RBM46	94	83.409	Colobus_angolensis_palliatus
ENSHGLG00100004977	-	99	75.954	ENSCGRG00001016714	Rbm46	94	83.182	Cricetulus_griseus_chok1gshd
ENSHGLG00100004977	-	99	75.954	ENSCGRG00000011738	Rbm46	94	83.182	Cricetulus_griseus_crigri
ENSHGLG00100004977	-	81	53.056	ENSCSEG00000005530	rbm46	89	53.545	Cynoglossus_semilaevis
ENSHGLG00100004977	-	81	56.796	ENSCVAG00000021013	rbm46	88	56.604	Cyprinodon_variegatus
ENSHGLG00100004977	-	97	53.635	ENSDARG00000079452	rbm46	97	54.150	Danio_rerio
ENSHGLG00100004977	-	99	76.145	ENSDNOG00000016195	RBM46	97	77.099	Dasypus_novemcinctus
ENSHGLG00100004977	-	99	76.527	ENSDORG00000006405	Rbm46	94	83.636	Dipodomys_ordii
ENSHGLG00100004977	-	99	73.614	ENSETEG00000014902	RBM46	97	74.374	Echinops_telfairi
ENSHGLG00100004977	-	99	74.618	ENSEASG00005015821	RBM46	97	75.000	Equus_asinus_asinus
ENSHGLG00100004977	-	86	81.591	ENSECAG00000007649	RBM46	91	82.045	Equus_caballus
ENSHGLG00100004977	-	99	74.237	ENSEEUG00000011824	RBM46	97	74.809	Erinaceus_europaeus
ENSHGLG00100004977	-	74	61.741	ENSELUG00000008166	rbm46	98	62.269	Esox_lucius
ENSHGLG00100004977	-	99	75.954	ENSFCAG00000029812	RBM46	94	83.636	Felis_catus
ENSHGLG00100004977	-	86	70.909	ENSFALG00000013157	RBM46	86	71.364	Ficedula_albicollis
ENSHGLG00100004977	-	98	75.200	ENSFDAG00000006445	-	97	75.600	Fukomys_damarensis
ENSHGLG00100004977	-	99	72.137	ENSFDAG00000019281	-	97	72.519	Fukomys_damarensis
ENSHGLG00100004977	-	69	57.386	ENSFHEG00000013257	rbm46	82	56.868	Fundulus_heteroclitus
ENSHGLG00100004977	-	86	67.500	ENSGALG00000009278	RBM46	93	68.182	Gallus_gallus
ENSHGLG00100004977	-	56	69.338	ENSGAFG00000020245	rbm46	67	70.383	Gambusia_affinis
ENSHGLG00100004977	-	86	78.864	ENSGAGG00000002019	RBM46	84	79.318	Gopherus_agassizii
ENSHGLG00100004977	-	99	76.145	ENSGGOG00000001876	RBM46	94	83.636	Gorilla_gorilla
ENSHGLG00100004977	-	81	56.808	ENSHBUG00000009609	rbm46	91	58.571	Haplochromis_burtoni
ENSHGLG00100004977	-	100	100.000	ENSHGLG00000010742	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100004977	-	97	63.548	ENSHGLG00000002940	-	98	63.548	Heterocephalus_glaber_female
ENSHGLG00100004977	-	97	75.304	ENSHGLG00000002463	-	99	81.755	Heterocephalus_glaber_female
ENSHGLG00100004977	-	84	47.045	ENSHCOG00000012998	rbm46	88	46.336	Hippocampus_comes
ENSHGLG00100004977	-	96	52.794	ENSIPUG00000024038	rbm46	97	53.371	Ictalurus_punctatus
ENSHGLG00100004977	-	99	76.718	ENSSTOG00000007918	RBM46	94	84.091	Ictidomys_tridecemlineatus
ENSHGLG00100004977	-	86	81.136	ENSJJAG00000003902	Rbm46	94	81.591	Jaculus_jaculus
ENSHGLG00100004977	-	85	58.199	ENSKMAG00000015127	rbm46	83	58.891	Kryptolebias_marmoratus
ENSHGLG00100004977	-	98	69.038	ENSLACG00000002062	RBM46	97	69.423	Latimeria_chalumnae
ENSHGLG00100004977	-	95	59.519	ENSLOCG00000008298	rbm46	90	67.548	Lepisosteus_oculatus
ENSHGLG00100004977	-	86	83.409	ENSLAFG00000015448	RBM46	94	83.864	Loxodonta_africana
ENSHGLG00100004977	-	86	83.182	ENSMFAG00000043485	RBM46	94	83.636	Macaca_fascicularis
ENSHGLG00100004977	-	86	83.182	ENSMMUG00000021147	RBM46	91	83.636	Macaca_mulatta
ENSHGLG00100004977	-	86	83.182	ENSMNEG00000002787	RBM46	94	83.636	Macaca_nemestrina
ENSHGLG00100004977	-	86	82.955	ENSMLEG00000029756	RBM46	94	83.409	Mandrillus_leucophaeus
ENSHGLG00100004977	-	80	59.712	ENSMAMG00000009093	rbm46	82	60.723	Mastacembelus_armatus
ENSHGLG00100004977	-	92	52.610	ENSMZEG00005027849	rbm46	95	53.320	Maylandia_zebra
ENSHGLG00100004977	-	86	67.727	ENSMGAG00000001457	RBM46	94	68.409	Meleagris_gallopavo
ENSHGLG00100004977	-	99	75.954	ENSMAUG00000009911	Rbm46	94	83.182	Mesocricetus_auratus
ENSHGLG00100004977	-	99	75.954	ENSMICG00000042747	RBM46	94	83.182	Microcebus_murinus
ENSHGLG00100004977	-	99	76.145	ENSMOCG00000001188	Rbm46	94	83.409	Microtus_ochrogaster
ENSHGLG00100004977	-	82	55.634	ENSMMOG00000011214	rbm46	81	55.634	Mola_mola
ENSHGLG00100004977	-	86	82.273	ENSMODG00000001302	RBM46	82	82.727	Monodelphis_domestica
ENSHGLG00100004977	-	80	58.010	ENSMALG00000006185	rbm46	87	57.627	Monopterus_albus
ENSHGLG00100004977	-	99	76.145	MGP_CAROLIEiJ_G0025101	Rbm46	94	83.409	Mus_caroli
ENSHGLG00100004977	-	99	75.763	ENSMUSG00000033882	Rbm46	94	82.955	Mus_musculus
ENSHGLG00100004977	-	99	75.763	MGP_PahariEiJ_G0026544	Rbm46	94	83.182	Mus_pahari
ENSHGLG00100004977	-	99	75.573	MGP_SPRETEiJ_G0026043	Rbm46	94	82.727	Mus_spretus
ENSHGLG00100004977	-	86	83.636	ENSMPUG00000005670	RBM46	91	84.091	Mustela_putorius_furo
ENSHGLG00100004977	-	99	75.810	ENSMLUG00000003221	RBM46	97	76.190	Myotis_lucifugus
ENSHGLG00100004977	-	99	74.618	ENSNGAG00000004231	Rbm46	93	82.955	Nannospalax_galili
ENSHGLG00100004977	-	82	57.729	ENSNBRG00000000273	rbm46	77	58.722	Neolamprologus_brichardi
ENSHGLG00100004977	-	86	82.955	ENSNLEG00000006184	RBM46	94	83.409	Nomascus_leucogenys
ENSHGLG00100004977	-	76	83.290	ENSMEUG00000013328	RBM46	92	82.984	Notamacropus_eugenii
ENSHGLG00100004977	-	57	86.170	ENSOPRG00000007136	RBM46	100	86.170	Ochotona_princeps
ENSHGLG00100004977	-	99	74.257	ENSODEG00000018002	-	96	74.851	Octodon_degus
ENSHGLG00100004977	-	99	72.710	ENSODEG00000000735	-	94	80.682	Octodon_degus
ENSHGLG00100004977	-	78	58.416	ENSONIG00000014096	rbm46	90	57.857	Oreochromis_niloticus
ENSHGLG00100004977	-	86	76.190	ENSOANG00000002141	RBM46	91	76.190	Ornithorhynchus_anatinus
ENSHGLG00100004977	-	99	76.527	ENSOCUG00000017859	RBM46	97	77.481	Oryctolagus_cuniculus
ENSHGLG00100004977	-	84	56.000	ENSORLG00000002429	rbm46	85	56.190	Oryzias_latipes
ENSHGLG00100004977	-	84	55.000	ENSORLG00020022154	rbm46	79	55.909	Oryzias_latipes_hni
ENSHGLG00100004977	-	84	56.075	ENSORLG00015020234	rbm46	89	55.227	Oryzias_latipes_hsok
ENSHGLG00100004977	-	80	53.318	ENSOMEG00000022580	rbm46	80	55.687	Oryzias_melastigma
ENSHGLG00100004977	-	99	76.527	ENSOGAG00000005647	RBM46	97	77.481	Otolemur_garnettii
ENSHGLG00100004977	-	99	75.191	ENSOARG00000016406	RBM46	91	82.727	Ovis_aries
ENSHGLG00100004977	-	86	83.182	ENSPPAG00000043236	RBM46	94	83.636	Pan_paniscus
ENSHGLG00100004977	-	99	75.573	ENSPPRG00000009416	RBM46	94	83.409	Panthera_pardus
ENSHGLG00100004977	-	99	75.573	ENSPTIG00000017449	RBM46	94	83.409	Panthera_tigris_altaica
ENSHGLG00100004977	-	86	83.182	ENSPTRG00000016538	RBM46	94	83.636	Pan_troglodytes
ENSHGLG00100004977	-	99	76.145	ENSPANG00000004186	RBM46	94	83.636	Papio_anubis
ENSHGLG00100004977	-	96	57.570	ENSPKIG00000015334	rbm46	88	56.773	Paramormyrops_kingsleyae
ENSHGLG00100004977	-	86	79.318	ENSPSIG00000006429	RBM46	90	79.773	Pelodiscus_sinensis
ENSHGLG00100004977	-	78	59.375	ENSPMGG00000019872	rbm46	85	59.747	Periophthalmus_magnuspinnatus
ENSHGLG00100004977	-	99	75.954	ENSPEMG00000013899	Rbm46	94	83.182	Peromyscus_maniculatus_bairdii
ENSHGLG00100004977	-	99	75.382	ENSPCIG00000029626	RBM46	91	82.500	Phascolarctos_cinereus
ENSHGLG00100004977	-	70	67.450	ENSPFOG00000001079	rbm46	65	67.450	Poecilia_formosa
ENSHGLG00100004977	-	85	56.751	ENSPLAG00000004541	rbm46	78	57.883	Poecilia_latipinna
ENSHGLG00100004977	-	85	56.751	ENSPMEG00000015724	rbm46	95	51.476	Poecilia_mexicana
ENSHGLG00100004977	-	85	56.751	ENSPREG00000014464	rbm46	89	59.048	Poecilia_reticulata
ENSHGLG00100004977	-	99	75.763	ENSPPYG00000015144	RBM46	97	76.718	Pongo_abelii
ENSHGLG00100004977	-	99	69.981	ENSPCAG00000003110	RBM46	97	71.319	Procavia_capensis
ENSHGLG00100004977	-	99	75.573	ENSPCOG00000024347	RBM46	94	82.727	Propithecus_coquereli
ENSHGLG00100004977	-	99	76.291	ENSPVAG00000008376	RBM46	97	77.247	Pteropus_vampyrus
ENSHGLG00100004977	-	93	53.984	ENSPNAG00000025312	rbm46	95	54.762	Pygocentrus_nattereri
ENSHGLG00100004977	-	99	76.145	ENSRNOG00000025823	Rbm46	97	76.527	Rattus_norvegicus
ENSHGLG00100004977	-	86	82.045	ENSRBIG00000032583	RBM46	94	82.500	Rhinopithecus_bieti
ENSHGLG00100004977	-	86	82.273	ENSRROG00000044288	RBM46	94	82.727	Rhinopithecus_roxellana
ENSHGLG00100004977	-	99	75.191	ENSSBOG00000033028	RBM46	94	82.727	Saimiri_boliviensis_boliviensis
ENSHGLG00100004977	-	99	75.573	ENSSHAG00000012596	RBM46	97	75.954	Sarcophilus_harrisii
ENSHGLG00100004977	-	97	58.614	ENSSFOG00015000087	rbm46	95	58.614	Scleropages_formosus
ENSHGLG00100004977	-	81	56.174	ENSSMAG00000017042	rbm46	87	56.659	Scophthalmus_maximus
ENSHGLG00100004977	-	82	59.102	ENSSDUG00000020645	rbm46	82	60.095	Seriola_dumerili
ENSHGLG00100004977	-	99	75.954	ENSSARG00000006520	RBM46	97	76.908	Sorex_araneus
ENSHGLG00100004977	-	98	72.587	ENSSPUG00000012525	-	97	72.973	Sphenodon_punctatus
ENSHGLG00100004977	-	86	76.364	ENSSPUG00000004773	-	92	76.818	Sphenodon_punctatus
ENSHGLG00100004977	-	82	56.115	ENSSPAG00000013697	rbm46	88	56.115	Stegastes_partitus
ENSHGLG00100004977	-	86	83.182	ENSSSCG00000008994	RBM46	91	83.636	Sus_scrofa
ENSHGLG00100004977	-	85	70.023	ENSTGUG00000005307	RBM46	94	70.481	Taeniopygia_guttata
ENSHGLG00100004977	-	83	56.440	ENSTRUG00000004237	rbm46	85	57.656	Takifugu_rubripes
ENSHGLG00100004977	-	82	54.483	ENSTNIG00000008714	rbm46	80	55.172	Tetraodon_nigroviridis
ENSHGLG00100004977	-	98	73.654	ENSTBEG00000013949	RBM46	97	73.664	Tupaia_belangeri
ENSHGLG00100004977	-	99	73.855	ENSTTRG00000001239	RBM46	97	74.237	Tursiops_truncatus
ENSHGLG00100004977	-	99	76.527	ENSUAMG00000026593	RBM46	91	84.091	Ursus_americanus
ENSHGLG00100004977	-	99	76.336	ENSUMAG00000016442	RBM46	91	83.864	Ursus_maritimus
ENSHGLG00100004977	-	99	76.236	ENSVVUG00000024957	RBM46	94	84.091	Vulpes_vulpes
ENSHGLG00100004977	-	71	61.308	ENSXETG00000032067	-	100	62.670	Xenopus_tropicalis
ENSHGLG00100004977	-	86	66.287	ENSXETG00000022412	-	96	60.694	Xenopus_tropicalis
ENSHGLG00100004977	-	86	46.018	ENSXETG00000032344	-	96	43.797	Xenopus_tropicalis
ENSHGLG00100004977	-	80	61.235	ENSXMAG00000008237	rbm46	79	61.235	Xiphophorus_maculatus