EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100005043 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 3359 bases
Position: chrJH169581.1:670562-673920
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006717	RRM_1	PF00076.22	4.1e-21	1	2
ENSHGLP00100006717	RRM_1	PF00076.22	4.1e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100006808	SRSF6-201	879	-	ENSHGLP00100006717	292 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100005043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100005043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100005043	SRSF6	50	33.000	ENSHGLG00100016906	-	78	33.663

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100005043	SRSF6	94	79.077	ENSG00000124193	SRSF6	94	82.099	Homo_sapiens
ENSHGLG00100005043	SRSF6	92	97.222	ENSAMEG00000003710	SRSF6	94	80.308	Ailuropoda_melanoleuca
ENSHGLG00100005043	SRSF6	68	54.510	ENSACIG00000020091	-	95	50.394	Amphilophus_citrinellus
ENSHGLG00100005043	SRSF6	85	49.329	ENSACIG00000023658	-	56	65.363	Amphilophus_citrinellus
ENSHGLG00100005043	SRSF6	60	53.304	ENSAPEG00000020746	-	66	60.106	Amphiprion_percula
ENSHGLG00100005043	SRSF6	93	67.077	ENSACAG00000002061	SRSF6	92	70.625	Anolis_carolinensis
ENSHGLG00100005043	SRSF6	94	78.462	ENSANAG00000024080	SRSF6	94	81.481	Aotus_nancymaae
ENSHGLG00100005043	SRSF6	93	78.571	ENSBTAG00000008527	SRSF6	94	81.173	Bos_taurus
ENSHGLG00100005043	SRSF6	74	80.224	ENSCJAG00000048403	SRSF6	99	80.224	Callithrix_jacchus
ENSHGLG00100005043	SRSF6	93	78.395	ENSCAFG00000009289	SRSF6	94	80.864	Canis_familiaris
ENSHGLG00100005043	SRSF6	93	78.395	ENSCAFG00020013559	SRSF6	94	80.864	Canis_lupus_dingo
ENSHGLG00100005043	SRSF6	93	78.704	ENSCHIG00000015890	-	94	81.173	Capra_hircus
ENSHGLG00100005043	SRSF6	93	78.704	ENSCHIG00000009148	-	94	81.173	Capra_hircus
ENSHGLG00100005043	SRSF6	93	96.679	ENSTSYG00000026476	SRSF6	93	96.703	Carlito_syrichta
ENSHGLG00100005043	SRSF6	93	63.580	ENSCPOG00000011761	SRSF6	78	97.183	Cavia_porcellus
ENSHGLG00100005043	SRSF6	94	78.769	ENSCCAG00000026018	-	94	81.790	Cebus_capucinus
ENSHGLG00100005043	SRSF6	94	59.119	ENSCCAG00000018540	-	62	68.889	Cebus_capucinus
ENSHGLG00100005043	SRSF6	100	82.899	ENSCATG00000030794	SRSF6	100	82.899	Cercocebus_atys
ENSHGLG00100005043	SRSF6	100	85.131	ENSCLAG00000010247	SRSF6	100	85.131	Chinchilla_lanigera
ENSHGLG00100005043	SRSF6	100	82.899	ENSCSAG00000014022	SRSF6	100	82.899	Chlorocebus_sabaeus
ENSHGLG00100005043	SRSF6	100	82.319	ENSCHOG00000000561	SRSF6	100	82.319	Choloepus_hoffmanni
ENSHGLG00100005043	SRSF6	93	78.704	ENSCANG00000037774	-	94	81.481	Colobus_angolensis_palliatus
ENSHGLG00100005043	SRSF6	100	96.939	ENSCANG00000042529	-	100	96.939	Colobus_angolensis_palliatus
ENSHGLG00100005043	SRSF6	100	81.924	ENSCGRG00001022339	Srsf6	100	81.924	Cricetulus_griseus_chok1gshd
ENSHGLG00100005043	SRSF6	73	95.327	ENSCGRG00000006618	Srsf6	100	95.327	Cricetulus_griseus_crigri
ENSHGLG00100005043	SRSF6	93	77.778	ENSDNOG00000008410	SRSF6	94	80.556	Dasypus_novemcinctus
ENSHGLG00100005043	SRSF6	100	83.430	ENSDORG00000028378	Srsf6	100	83.430	Dipodomys_ordii
ENSHGLG00100005043	SRSF6	92	78.370	ENSETEG00000006221	SRSF6	94	79.503	Echinops_telfairi
ENSHGLG00100005043	SRSF6	93	77.469	ENSEASG00005023429	SRSF6	94	80.864	Equus_asinus_asinus
ENSHGLG00100005043	SRSF6	93	77.469	ENSECAG00000023932	SRSF6	94	80.864	Equus_caballus
ENSHGLG00100005043	SRSF6	67	93.333	ENSEEUG00000002324	SRSF6	90	93.401	Erinaceus_europaeus
ENSHGLG00100005043	SRSF6	93	78.395	ENSFCAG00000032814	SRSF6	94	80.864	Felis_catus
ENSHGLG00100005043	SRSF6	100	98.973	ENSFDAG00000012191	SRSF6	100	98.973	Fukomys_damarensis
ENSHGLG00100005043	SRSF6	86	55.921	ENSFHEG00000023065	srsf6a	55	66.120	Fundulus_heteroclitus
ENSHGLG00100005043	SRSF6	92	69.207	ENSGALG00000000990	SRSF6	94	67.470	Gallus_gallus
ENSHGLG00100005043	SRSF6	86	46.313	ENSGACG00000006084	srsf6a	53	61.828	Gasterosteus_aculeatus
ENSHGLG00100005043	SRSF6	94	79.077	ENSGGOG00000009808	SRSF6	94	82.099	Gorilla_gorilla
ENSHGLG00100005043	SRSF6	51	92.667	ENSGGOG00000043139	-	99	85.870	Gorilla_gorilla
ENSHGLG00100005043	SRSF6	57	56.250	ENSHBUG00000006386	-	58	63.889	Haplochromis_burtoni
ENSHGLG00100005043	SRSF6	86	67.687	ENSHGLG00000007701	-	58	59.358	Heterocephalus_glaber_female
ENSHGLG00100005043	SRSF6	100	85.131	ENSHGLG00000007348	SRSF6	100	85.131	Heterocephalus_glaber_female
ENSHGLG00100005043	SRSF6	100	83.430	ENSSTOG00000010866	SRSF6	100	83.430	Ictidomys_tridecemlineatus
ENSHGLG00100005043	SRSF6	66	93.264	ENSJJAG00000020690	Srsf6	91	92.308	Jaculus_jaculus
ENSHGLG00100005043	SRSF6	87	67.308	ENSLACG00000005466	SRSF6	54	67.568	Latimeria_chalumnae
ENSHGLG00100005043	SRSF6	82	94.142	ENSLAFG00000006682	SRSF6	92	94.538	Loxodonta_africana
ENSHGLG00100005043	SRSF6	100	82.899	ENSMFAG00000036925	SRSF6	100	82.899	Macaca_fascicularis
ENSHGLG00100005043	SRSF6	100	82.899	ENSMMUG00000006742	SRSF6	100	82.899	Macaca_mulatta
ENSHGLG00100005043	SRSF6	93	77.640	ENSMNEG00000038270	-	94	81.790	Macaca_nemestrina
ENSHGLG00100005043	SRSF6	100	82.899	ENSMNEG00000027392	-	100	82.899	Macaca_nemestrina
ENSHGLG00100005043	SRSF6	73	96.296	ENSMLEG00000031524	SRSF6	100	96.296	Mandrillus_leucophaeus
ENSHGLG00100005043	SRSF6	56	54.626	ENSMZEG00005008032	-	57	63.889	Maylandia_zebra
ENSHGLG00100005043	SRSF6	94	77.846	ENSMICG00000008537	SRSF6	94	80.864	Microcebus_murinus
ENSHGLG00100005043	SRSF6	73	95.327	ENSMOCG00000018738	Srsf6	100	95.327	Microtus_ochrogaster
ENSHGLG00100005043	SRSF6	93	78.086	MGP_CAROLIEiJ_G0024606	Srsf6	95	80.556	Mus_caroli
ENSHGLG00100005043	SRSF6	93	78.395	ENSMUSG00000016921	Srsf6	95	80.864	Mus_musculus
ENSHGLG00100005043	SRSF6	93	78.395	MGP_PahariEiJ_G0026050	Srsf6	95	80.556	Mus_pahari
ENSHGLG00100005043	SRSF6	93	78.395	MGP_SPRETEiJ_G0025528	Srsf6	95	80.864	Mus_spretus
ENSHGLG00100005043	SRSF6	81	79.861	ENSMPUG00000017692	SRSF6	99	79.861	Mustela_putorius_furo
ENSHGLG00100005043	SRSF6	93	79.503	ENSMLUG00000016618	SRSF6	94	79.630	Myotis_lucifugus
ENSHGLG00100005043	SRSF6	100	81.924	ENSNGAG00000017560	Srsf6	100	81.924	Nannospalax_galili
ENSHGLG00100005043	SRSF6	94	79.077	ENSNLEG00000006524	SRSF6	94	82.099	Nomascus_leucogenys
ENSHGLG00100005043	SRSF6	88	96.512	ENSOPRG00000002017	-	100	96.512	Ochotona_princeps
ENSHGLG00100005043	SRSF6	82	79.322	ENSOCUG00000009785	-	98	79.322	Oryctolagus_cuniculus
ENSHGLG00100005043	SRSF6	94	77.231	ENSOGAG00000014468	SRSF6	94	80.247	Otolemur_garnettii
ENSHGLG00100005043	SRSF6	93	80.625	ENSOARG00000003117	SRSF6	94	81.366	Ovis_aries
ENSHGLG00100005043	SRSF6	89	73.355	ENSPPAG00000043131	-	100	74.013	Pan_paniscus
ENSHGLG00100005043	SRSF6	94	76.543	ENSPPAG00000034327	-	94	82.353	Pan_paniscus
ENSHGLG00100005043	SRSF6	93	78.395	ENSPPRG00000008917	SRSF6	94	80.864	Panthera_pardus
ENSHGLG00100005043	SRSF6	67	95.385	ENSPTIG00000019153	SRSF6	90	95.385	Panthera_tigris_altaica
ENSHGLG00100005043	SRSF6	89	73.355	ENSPTRG00000046274	-	100	74.013	Pan_troglodytes
ENSHGLG00100005043	SRSF6	94	78.769	ENSPTRG00000044686	-	94	81.790	Pan_troglodytes
ENSHGLG00100005043	SRSF6	89	96.169	ENSPANG00000035224	SRSF6	100	82.899	Papio_anubis
ENSHGLG00100005043	SRSF6	89	56.105	ENSPKIG00000018463	-	67	65.169	Paramormyrops_kingsleyae
ENSHGLG00100005043	SRSF6	86	53.595	ENSPMGG00000014963	srsf6a	55	66.304	Periophthalmus_magnuspinnatus
ENSHGLG00100005043	SRSF6	86	50.314	ENSPLAG00000009243	srsf6a	80	51.969	Poecilia_latipinna
ENSHGLG00100005043	SRSF6	94	79.077	ENSPPYG00000011019	SRSF6	94	82.099	Pongo_abelii
ENSHGLG00100005043	SRSF6	94	78.769	ENSPCOG00000026364	SRSF6	94	81.790	Propithecus_coquereli
ENSHGLG00100005043	SRSF6	93	76.235	ENSPVAG00000015232	SRSF6	94	78.704	Pteropus_vampyrus
ENSHGLG00100005043	SRSF6	93	78.395	ENSRNOG00000006380	Srsf6	95	80.864	Rattus_norvegicus
ENSHGLG00100005043	SRSF6	93	81.703	ENSRBIG00000041414	SRSF6	94	83.072	Rhinopithecus_bieti
ENSHGLG00100005043	SRSF6	93	79.012	ENSRROG00000029989	SRSF6	94	81.790	Rhinopithecus_roxellana
ENSHGLG00100005043	SRSF6	94	78.462	ENSSBOG00000033708	-	94	81.481	Saimiri_boliviensis_boliviensis
ENSHGLG00100005043	SRSF6	92	62.258	ENSSBOG00000034078	-	54	62.353	Saimiri_boliviensis_boliviensis
ENSHGLG00100005043	SRSF6	82	95.378	ENSSARG00000001602	SRSF6	92	94.958	Sorex_araneus
ENSHGLG00100005043	SRSF6	71	48.679	ENSSPAG00000002362	srsf6a	67	64.021	Stegastes_partitus
ENSHGLG00100005043	SRSF6	93	78.395	ENSSSCG00000007362	SRSF6	96	79.931	Sus_scrofa
ENSHGLG00100005043	SRSF6	92	67.385	ENSTGUG00000003455	SRSF6	94	70.213	Taeniopygia_guttata
ENSHGLG00100005043	SRSF6	86	54.125	ENSTNIG00000001692	srsf6a	57	63.978	Tetraodon_nigroviridis
ENSHGLG00100005043	SRSF6	79	95.217	ENSTBEG00000013448	SRSF6	76	95.000	Tupaia_belangeri
ENSHGLG00100005043	SRSF6	80	96.596	ENSTTRG00000015410	SRSF6	92	96.639	Tursiops_truncatus
ENSHGLG00100005043	SRSF6	93	78.395	ENSUAMG00000003559	SRSF6	94	80.864	Ursus_americanus
ENSHGLG00100005043	SRSF6	67	95.385	ENSUMAG00000001154	SRSF6	90	95.385	Ursus_maritimus
ENSHGLG00100005043	SRSF6	89	100.000	ENSVPAG00000003016	SRSF6	77	100.000	Vicugna_pacos