EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100005198 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 11272 bases
Position: chrJH172096.1:430020-441291
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100006927	MBD	PF01429.19	5.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100007019	MBD1-201	1961	-	ENSHGLP00100006927	551 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100005198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100005198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100005198	MBD1	100	87.948	ENSG00000141644	MBD1	93	86.943	Homo_sapiens
ENSHGLG00100005198	MBD1	100	88.961	ENSAMEG00000000238	MBD1	81	88.961	Ailuropoda_melanoleuca
ENSHGLG00100005198	MBD1	52	42.857	ENSACAG00000006091	-	72	41.156	Anolis_carolinensis
ENSHGLG00100005198	MBD1	100	87.622	ENSANAG00000036253	MBD1	93	86.624	Aotus_nancymaae
ENSHGLG00100005198	MBD1	100	88.487	ENSBTAG00000003801	MBD1	84	87.948	Bos_taurus
ENSHGLG00100005198	MBD1	98	89.734	ENSCJAG00000004959	MBD1	93	84.356	Callithrix_jacchus
ENSHGLG00100005198	MBD1	100	87.742	ENSCAFG00000018928	MBD1	89	87.261	Canis_familiaris
ENSHGLG00100005198	MBD1	98	85.366	ENSCAFG00020024272	MBD1	90	87.261	Canis_lupus_dingo
ENSHGLG00100005198	MBD1	100	88.197	ENSCHIG00000021134	MBD1	84	87.948	Capra_hircus
ENSHGLG00100005198	MBD1	98	87.833	ENSTSYG00000000509	MBD1	93	85.350	Carlito_syrichta
ENSHGLG00100005198	MBD1	98	73.989	ENSCAPG00000015782	MBD1	96	73.462	Cavia_aperea
ENSHGLG00100005198	MBD1	100	77.821	ENSCPOG00000001671	MBD1	89	77.308	Cavia_porcellus
ENSHGLG00100005198	MBD1	98	89.354	ENSCCAG00000034600	MBD1	100	79.685	Cebus_capucinus
ENSHGLG00100005198	MBD1	100	88.274	ENSCATG00000029959	MBD1	100	80.488	Cercocebus_atys
ENSHGLG00100005198	MBD1	100	90.774	ENSCLAG00000007457	MBD1	82	93.312	Chinchilla_lanigera
ENSHGLG00100005198	MBD1	100	81.433	ENSCSAG00000018070	MBD1	89	90.152	Chlorocebus_sabaeus
ENSHGLG00100005198	MBD1	100	87.948	ENSCANG00000033425	MBD1	93	86.943	Colobus_angolensis_palliatus
ENSHGLG00100005198	MBD1	100	71.125	ENSCGRG00001014843	Mbd1	93	75.601	Cricetulus_griseus_chok1gshd
ENSHGLG00100005198	MBD1	98	62.345	ENSCGRG00000014135	Mbd1	96	63.704	Cricetulus_griseus_crigri
ENSHGLG00100005198	MBD1	100	88.411	ENSDNOG00000015998	MBD1	90	86.538	Dasypus_novemcinctus
ENSHGLG00100005198	MBD1	98	72.954	ENSDORG00000013917	Mbd1	96	74.081	Dipodomys_ordii
ENSHGLG00100005198	MBD1	100	89.216	ENSEASG00005003857	MBD1	84	89.251	Equus_asinus_asinus
ENSHGLG00100005198	MBD1	100	88.973	ENSECAG00000011497	MBD1	66	88.961	Equus_caballus
ENSHGLG00100005198	MBD1	100	84.273	ENSFCAG00000015730	MBD1	92	88.312	Felis_catus
ENSHGLG00100005198	MBD1	98	86.477	ENSFDAG00000011085	MBD1	95	85.587	Fukomys_damarensis
ENSHGLG00100005198	MBD1	90	36.969	ENSGAGG00000008206	-	51	47.312	Gopherus_agassizii
ENSHGLG00100005198	MBD1	100	87.948	ENSGGOG00000016966	MBD1	93	86.943	Gorilla_gorilla
ENSHGLG00100005198	MBD1	100	99.682	ENSHGLG00000008740	MBD1	93	99.682	Heterocephalus_glaber_female
ENSHGLG00100005198	MBD1	100	78.505	ENSSTOG00000007780	MBD1	92	78.125	Ictidomys_tridecemlineatus
ENSHGLG00100005198	MBD1	98	72.695	ENSJJAG00000022859	Mbd1	96	71.631	Jaculus_jaculus
ENSHGLG00100005198	MBD1	98	71.212	ENSLAFG00000031328	MBD1	90	65.204	Loxodonta_africana
ENSHGLG00100005198	MBD1	100	87.821	ENSMFAG00000026335	MBD1	100	81.010	Macaca_fascicularis
ENSHGLG00100005198	MBD1	100	87.821	ENSMMUG00000009050	MBD1	93	87.580	Macaca_mulatta
ENSHGLG00100005198	MBD1	100	87.821	ENSMNEG00000038822	MBD1	100	81.010	Macaca_nemestrina
ENSHGLG00100005198	MBD1	100	88.274	ENSMLEG00000043121	MBD1	100	80.488	Mandrillus_leucophaeus
ENSHGLG00100005198	MBD1	100	83.067	ENSMICG00000006414	MBD1	100	73.973	Microcebus_murinus
ENSHGLG00100005198	MBD1	98	62.994	ENSMUSG00000024561	Mbd1	96	61.189	Mus_musculus
ENSHGLG00100005198	MBD1	100	63.478	MGP_PahariEiJ_G0019128	Mbd1	96	62.434	Mus_pahari
ENSHGLG00100005198	MBD1	98	64.368	MGP_SPRETEiJ_G0023304	Mbd1	92	64.072	Mus_spretus
ENSHGLG00100005198	MBD1	100	85.758	ENSMPUG00000008843	MBD1	88	89.286	Mustela_putorius_furo
ENSHGLG00100005198	MBD1	100	87.541	ENSMLUG00000008286	MBD1	89	85.987	Myotis_lucifugus
ENSHGLG00100005198	MBD1	98	68.641	ENSNGAG00000011412	Mbd1	96	69.534	Nannospalax_galili
ENSHGLG00100005198	MBD1	98	68.496	ENSNLEG00000032711	-	90	70.384	Nomascus_leucogenys
ENSHGLG00100005198	MBD1	100	86.624	ENSNLEG00000011661	-	93	86.624	Nomascus_leucogenys
ENSHGLG00100005198	MBD1	100	56.121	ENSOPRG00000007647	MBD1	94	78.451	Ochotona_princeps
ENSHGLG00100005198	MBD1	98	83.630	ENSODEG00000018451	MBD1	96	83.452	Octodon_degus
ENSHGLG00100005198	MBD1	97	84.295	ENSOCUG00000006554	MBD1	86	84.889	Oryctolagus_cuniculus
ENSHGLG00100005198	MBD1	100	85.942	ENSOGAG00000003784	MBD1	89	85.714	Otolemur_garnettii
ENSHGLG00100005198	MBD1	96	88.197	ENSOARG00000004218	MBD1	80	87.948	Ovis_aries
ENSHGLG00100005198	MBD1	100	81.185	ENSPPAG00000038886	MBD1	100	81.010	Pan_paniscus
ENSHGLG00100005198	MBD1	100	84.273	ENSPPRG00000021387	MBD1	92	88.312	Panthera_pardus
ENSHGLG00100005198	MBD1	100	84.570	ENSPTIG00000021231	MBD1	92	88.312	Panthera_tigris_altaica
ENSHGLG00100005198	MBD1	100	87.948	ENSPTRG00000010021	MBD1	100	81.010	Pan_troglodytes
ENSHGLG00100005198	MBD1	100	87.948	ENSPANG00000010867	MBD1	93	86.943	Papio_anubis
ENSHGLG00100005198	MBD1	98	62.715	ENSPEMG00000022630	Mbd1	96	63.009	Peromyscus_maniculatus_bairdii
ENSHGLG00100005198	MBD1	96	60.227	ENSPCIG00000027937	-	69	59.623	Phascolarctos_cinereus
ENSHGLG00100005198	MBD1	100	81.433	ENSPPYG00000009158	MBD1	80	90.152	Pongo_abelii
ENSHGLG00100005198	MBD1	99	82.576	ENSPCAG00000001648	MBD1	89	82.576	Procavia_capensis
ENSHGLG00100005198	MBD1	94	87.732	ENSPCOG00000012450	MBD1	100	77.565	Propithecus_coquereli
ENSHGLG00100005198	MBD1	98	50.171	ENSRNOG00000024104	Mbd1	96	54.724	Rattus_norvegicus
ENSHGLG00100005198	MBD1	100	74.919	ENSRBIG00000041294	MBD1	100	72.125	Rhinopithecus_bieti
ENSHGLG00100005198	MBD1	100	87.948	ENSRROG00000032517	MBD1	93	86.943	Rhinopithecus_roxellana
ENSHGLG00100005198	MBD1	100	84.953	ENSSBOG00000027169	MBD1	100	80.314	Saimiri_boliviensis_boliviensis
ENSHGLG00100005198	MBD1	98	88.746	ENSSSCG00000004516	MBD1	86	88.535	Sus_scrofa
ENSHGLG00100005198	MBD1	71	80.365	ENSTBEG00000012651	-	65	80.365	Tupaia_belangeri
ENSHGLG00100005198	MBD1	100	89.354	ENSTTRG00000015523	MBD1	81	89.394	Tursiops_truncatus
ENSHGLG00100005198	MBD1	98	88.636	ENSUAMG00000004752	MBD1	85	88.636	Ursus_americanus
ENSHGLG00100005198	MBD1	100	88.973	ENSUMAG00000002947	MBD1	81	89.015	Ursus_maritimus