EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100005497 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 7463 bases
Position: chrJH171126.1:521047-528509
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100007340	tRNA_int_end_N2	PF12928.7	4.1e-15	1	1
ENSHGLP00100007339	tRNA_int_end_N2	PF12928.7	4.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100007436	TSEN54-202	1461	-	ENSHGLP00100007340	486 (aa)	-	-
ENSHGLT00100007435	TSEN54-201	1578	-	ENSHGLP00100007339	525 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100005497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100005497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100005497	TSEN54	100	85.361	ENSG00000182173	TSEN54	100	94.444	Homo_sapiens
ENSHGLG00100005497	TSEN54	97	46.304	ENSAPOG00000009659	tsen54	99	44.522	Acanthochromis_polyacanthus
ENSHGLG00100005497	TSEN54	99	79.811	ENSAMEG00000009414	TSEN54	99	80.377	Ailuropoda_melanoleuca
ENSHGLG00100005497	TSEN54	97	46.109	ENSAOCG00000000152	tsen54	95	46.109	Amphiprion_ocellaris
ENSHGLG00100005497	TSEN54	97	45.525	ENSAPEG00000018931	tsen54	94	45.525	Amphiprion_percula
ENSHGLG00100005497	TSEN54	97	43.160	ENSATEG00000019860	tsen54	97	43.762	Anabas_testudineus
ENSHGLG00100005497	TSEN54	86	50.753	ENSAPLG00000009419	TSEN54	100	50.753	Anas_platyrhynchos
ENSHGLG00100005497	TSEN54	99	51.692	ENSACAG00000006714	TSEN54	99	51.692	Anolis_carolinensis
ENSHGLG00100005497	TSEN54	99	85.934	ENSANAG00000024061	TSEN54	99	86.095	Aotus_nancymaae
ENSHGLG00100005497	TSEN54	97	44.782	ENSACLG00000019800	tsen54	96	45.315	Astatotilapia_calliptera
ENSHGLG00100005497	TSEN54	97	47.002	ENSAMXG00000006546	tsen54	96	47.002	Astyanax_mexicanus
ENSHGLG00100005497	TSEN54	100	81.698	ENSBTAG00000000824	TSEN54	100	82.298	Bos_taurus
ENSHGLG00100005497	TSEN54	99	84.778	ENSCJAG00000014278	TSEN54	99	84.952	Callithrix_jacchus
ENSHGLG00100005497	TSEN54	100	83.051	ENSCAFG00000004798	TSEN54	100	83.239	Canis_familiaris
ENSHGLG00100005497	TSEN54	100	83.051	ENSCAFG00020000312	TSEN54	100	83.239	Canis_lupus_dingo
ENSHGLG00100005497	TSEN54	100	82.095	ENSCHIG00000019908	TSEN54	100	82.095	Capra_hircus
ENSHGLG00100005497	TSEN54	86	81.758	ENSTSYG00000037439	TSEN54	100	82.198	Carlito_syrichta
ENSHGLG00100005497	TSEN54	99	85.356	ENSCCAG00000036624	TSEN54	99	85.333	Cebus_capucinus
ENSHGLG00100005497	TSEN54	97	85.547	ENSCATG00000042877	TSEN54	99	85.714	Cercocebus_atys
ENSHGLG00100005497	TSEN54	97	88.258	ENSCLAG00000002924	TSEN54	99	88.550	Chinchilla_lanigera
ENSHGLG00100005497	TSEN54	100	85.171	ENSCSAG00000004809	TSEN54	100	85.361	Chlorocebus_sabaeus
ENSHGLG00100005497	TSEN54	99	54.717	ENSCPBG00000028071	TSEN54	99	54.717	Chrysemys_picta_bellii
ENSHGLG00100005497	TSEN54	100	84.601	ENSCANG00000028053	TSEN54	100	84.601	Colobus_angolensis_palliatus
ENSHGLG00100005497	TSEN54	100	82.476	ENSCGRG00001020029	Tsen54	100	82.476	Cricetulus_griseus_chok1gshd
ENSHGLG00100005497	TSEN54	84	82.127	ENSCGRG00000016289	Tsen54	100	82.127	Cricetulus_griseus_crigri
ENSHGLG00100005497	TSEN54	80	38.915	ENSCSEG00000020586	tsen54	99	38.915	Cynoglossus_semilaevis
ENSHGLG00100005497	TSEN54	80	45.498	ENSDARG00000036844	tsen54	99	45.498	Danio_rerio
ENSHGLG00100005497	TSEN54	100	77.778	ENSDNOG00000018452	TSEN54	100	78.908	Dasypus_novemcinctus
ENSHGLG00100005497	TSEN54	100	83.238	ENSDORG00000004073	Tsen54	100	83.238	Dipodomys_ordii
ENSHGLG00100005497	TSEN54	97	35.632	ENSEBUG00000005203	TSEN54	95	35.632	Eptatretus_burgeri
ENSHGLG00100005497	TSEN54	100	83.396	ENSEASG00005000579	TSEN54	100	83.396	Equus_asinus_asinus
ENSHGLG00100005497	TSEN54	100	83.208	ENSECAG00000004924	TSEN54	100	83.208	Equus_caballus
ENSHGLG00100005497	TSEN54	86	78.556	ENSEEUG00000008467	TSEN54	100	78.993	Erinaceus_europaeus
ENSHGLG00100005497	TSEN54	96	43.762	ENSELUG00000017703	tsen54	90	43.762	Esox_lucius
ENSHGLG00100005497	TSEN54	99	83.144	ENSFCAG00000023712	TSEN54	99	83.523	Felis_catus
ENSHGLG00100005497	TSEN54	94	51.613	ENSFALG00000001119	TSEN54	99	50.000	Ficedula_albicollis
ENSHGLG00100005497	TSEN54	86	91.796	ENSFDAG00000019090	TSEN54	99	91.796	Fukomys_damarensis
ENSHGLG00100005497	TSEN54	97	47.868	ENSFHEG00000005470	tsen54	96	48.062	Fundulus_heteroclitus
ENSHGLG00100005497	TSEN54	81	42.857	ENSGMOG00000013146	tsen54	99	42.857	Gadus_morhua
ENSHGLG00100005497	TSEN54	95	47.961	ENSGALG00000047163	TSEN54	98	47.961	Gallus_gallus
ENSHGLG00100005497	TSEN54	99	46.442	ENSGAFG00000005111	tsen54	99	46.816	Gambusia_affinis
ENSHGLG00100005497	TSEN54	96	44.828	ENSGACG00000014987	tsen54	99	44.828	Gasterosteus_aculeatus
ENSHGLG00100005497	TSEN54	100	56.111	ENSGAGG00000006825	TSEN54	99	56.111	Gopherus_agassizii
ENSHGLG00100005497	TSEN54	97	85.039	ENSGGOG00000009417	TSEN54	100	85.236	Gorilla_gorilla
ENSHGLG00100005497	TSEN54	87	43.312	ENSHBUG00000018296	tsen54	99	37.727	Haplochromis_burtoni
ENSHGLG00100005497	TSEN54	100	99.048	ENSHGLG00000007979	TSEN54	100	99.048	Heterocephalus_glaber_female
ENSHGLG00100005497	TSEN54	80	41.705	ENSHCOG00000007481	tsen54	99	41.705	Hippocampus_comes
ENSHGLG00100005497	TSEN54	99	41.856	ENSIPUG00000000590	tsen54	99	41.856	Ictalurus_punctatus
ENSHGLG00100005497	TSEN54	100	81.333	ENSSTOG00000012883	TSEN54	100	81.333	Ictidomys_tridecemlineatus
ENSHGLG00100005497	TSEN54	100	83.302	ENSJJAG00000007365	Tsen54	100	83.302	Jaculus_jaculus
ENSHGLG00100005497	TSEN54	97	45.817	ENSKMAG00000006944	tsen54	97	45.817	Kryptolebias_marmoratus
ENSHGLG00100005497	TSEN54	97	43.487	ENSLBEG00000004199	tsen54	97	43.678	Labrus_bergylta
ENSHGLG00100005497	TSEN54	97	46.641	ENSLACG00000009497	TSEN54	100	46.641	Latimeria_chalumnae
ENSHGLG00100005497	TSEN54	97	46.139	ENSLOCG00000011191	tsen54	97	47.753	Lepisosteus_oculatus
ENSHGLG00100005497	TSEN54	100	75.706	ENSLAFG00000011655	TSEN54	100	75.706	Loxodonta_africana
ENSHGLG00100005497	TSEN54	100	85.171	ENSMFAG00000000712	TSEN54	100	85.361	Macaca_fascicularis
ENSHGLG00100005497	TSEN54	100	84.981	ENSMNEG00000029199	TSEN54	100	85.171	Macaca_nemestrina
ENSHGLG00100005497	TSEN54	86	85.177	ENSMLEG00000044168	TSEN54	88	85.398	Mandrillus_leucophaeus
ENSHGLG00100005497	TSEN54	97	42.586	ENSMAMG00000019773	tsen54	97	43.156	Mastacembelus_armatus
ENSHGLG00100005497	TSEN54	97	44.782	ENSMZEG00005000884	tsen54	96	45.315	Maylandia_zebra
ENSHGLG00100005497	TSEN54	99	47.310	ENSMGAG00000009556	TSEN54	99	47.310	Meleagris_gallopavo
ENSHGLG00100005497	TSEN54	100	82.286	ENSMAUG00000016838	Tsen54	100	82.286	Mesocricetus_auratus
ENSHGLG00100005497	TSEN54	100	80.989	ENSMICG00000044012	TSEN54	100	81.749	Microcebus_murinus
ENSHGLG00100005497	TSEN54	100	83.238	ENSMOCG00000021585	Tsen54	100	83.238	Microtus_ochrogaster
ENSHGLG00100005497	TSEN54	73	62.092	ENSMMOG00000020189	tsen54	85	62.092	Mola_mola
ENSHGLG00100005497	TSEN54	98	66.541	ENSMODG00000007438	TSEN54	98	66.667	Monodelphis_domestica
ENSHGLG00100005497	TSEN54	97	44.612	ENSMALG00000020573	tsen54	97	44.612	Monopterus_albus
ENSHGLG00100005497	TSEN54	100	80.762	MGP_CAROLIEiJ_G0017417	Tsen54	100	80.762	Mus_caroli
ENSHGLG00100005497	TSEN54	100	80.952	ENSMUSG00000020781	Tsen54	100	80.952	Mus_musculus
ENSHGLG00100005497	TSEN54	100	80.571	MGP_PahariEiJ_G0018547	Tsen54	100	80.571	Mus_pahari
ENSHGLG00100005497	TSEN54	100	80.762	MGP_SPRETEiJ_G0018262	Tsen54	100	80.762	Mus_spretus
ENSHGLG00100005497	TSEN54	100	81.544	ENSMPUG00000013870	TSEN54	100	81.733	Mustela_putorius_furo
ENSHGLG00100005497	TSEN54	100	77.778	ENSMLUG00000015298	TSEN54	100	78.154	Myotis_lucifugus
ENSHGLG00100005497	TSEN54	100	81.524	ENSNGAG00000015673	Tsen54	100	81.524	Nannospalax_galili
ENSHGLG00100005497	TSEN54	89	63.597	ENSMEUG00000011908	TSEN54	100	63.597	Notamacropus_eugenii
ENSHGLG00100005497	TSEN54	100	74.573	ENSOPRG00000012513	TSEN54	100	74.573	Ochotona_princeps
ENSHGLG00100005497	TSEN54	97	45.665	ENSONIG00000009543	tsen54	96	45.665	Oreochromis_niloticus
ENSHGLG00100005497	TSEN54	99	73.734	ENSOCUG00000009875	TSEN54	99	75.235	Oryctolagus_cuniculus
ENSHGLG00100005497	TSEN54	97	45.019	ENSORLG00000000852	tsen54	97	45.019	Oryzias_latipes
ENSHGLG00100005497	TSEN54	97	45.490	ENSORLG00020018221	tsen54	97	45.243	Oryzias_latipes_hni
ENSHGLG00100005497	TSEN54	97	45.490	ENSORLG00015009413	tsen54	98	45.243	Oryzias_latipes_hsok
ENSHGLG00100005497	TSEN54	97	45.049	ENSOMEG00000014402	tsen54	94	45.049	Oryzias_melastigma
ENSHGLG00100005497	TSEN54	100	77.567	ENSOGAG00000001442	TSEN54	100	77.567	Otolemur_garnettii
ENSHGLG00100005497	TSEN54	86	79.825	ENSOARG00000010361	TSEN54	100	80.525	Ovis_aries
ENSHGLG00100005497	TSEN54	94	84.274	ENSPPAG00000043519	TSEN54	100	84.274	Pan_paniscus
ENSHGLG00100005497	TSEN54	99	83.144	ENSPPRG00000009162	TSEN54	99	83.523	Panthera_pardus
ENSHGLG00100005497	TSEN54	86	84.071	ENSPTIG00000019312	TSEN54	96	84.071	Panthera_tigris_altaica
ENSHGLG00100005497	TSEN54	100	85.171	ENSPTRG00000009646	TSEN54	100	85.361	Pan_troglodytes
ENSHGLG00100005497	TSEN54	99	85.143	ENSPANG00000020133	TSEN54	99	85.333	Papio_anubis
ENSHGLG00100005497	TSEN54	97	44.809	ENSPKIG00000023018	tsen54	100	45.287	Paramormyrops_kingsleyae
ENSHGLG00100005497	TSEN54	80	52.326	ENSPSIG00000012807	TSEN54	99	52.326	Pelodiscus_sinensis
ENSHGLG00100005497	TSEN54	92	36.049	ENSPMGG00000019578	tsen54	99	36.049	Periophthalmus_magnuspinnatus
ENSHGLG00100005497	TSEN54	100	83.238	ENSPEMG00000014857	Tsen54	100	83.238	Peromyscus_maniculatus_bairdii
ENSHGLG00100005497	TSEN54	99	46.468	ENSPFOG00000022740	tsen54	99	46.840	Poecilia_formosa
ENSHGLG00100005497	TSEN54	99	46.168	ENSPLAG00000014847	tsen54	99	46.542	Poecilia_latipinna
ENSHGLG00100005497	TSEN54	99	45.981	ENSPMEG00000022876	tsen54	99	46.355	Poecilia_mexicana
ENSHGLG00100005497	TSEN54	99	45.779	ENSPREG00000013090	tsen54	99	46.154	Poecilia_reticulata
ENSHGLG00100005497	TSEN54	91	78.033	ENSPPYG00000008629	TSEN54	100	78.243	Pongo_abelii
ENSHGLG00100005497	TSEN54	95	68.577	ENSPCAG00000002093	TSEN54	99	68.577	Procavia_capensis
ENSHGLG00100005497	TSEN54	99	83.556	ENSPCOG00000027880	TSEN54	99	84.321	Propithecus_coquereli
ENSHGLG00100005497	TSEN54	100	82.298	ENSPVAG00000008446	TSEN54	100	82.298	Pteropus_vampyrus
ENSHGLG00100005497	TSEN54	93	44.533	ENSPNYG00000010217	tsen54	99	45.129	Pundamilia_nyererei
ENSHGLG00100005497	TSEN54	97	44.381	ENSPNAG00000003770	tsen54	96	44.551	Pygocentrus_nattereri
ENSHGLG00100005497	TSEN54	100	80.762	ENSRNOG00000004598	Tsen54	100	80.762	Rattus_norvegicus
ENSHGLG00100005497	TSEN54	100	85.171	ENSRBIG00000043040	TSEN54	100	85.171	Rhinopithecus_bieti
ENSHGLG00100005497	TSEN54	100	84.981	ENSRROG00000030797	TSEN54	100	84.981	Rhinopithecus_roxellana
ENSHGLG00100005497	TSEN54	99	81.905	ENSSBOG00000013543	TSEN54	99	82.095	Saimiri_boliviensis_boliviensis
ENSHGLG00100005497	TSEN54	99	63.619	ENSSHAG00000018127	TSEN54	98	63.619	Sarcophilus_harrisii
ENSHGLG00100005497	TSEN54	81	45.199	ENSSFOG00015004093	tsen54	100	45.199	Scleropages_formosus
ENSHGLG00100005497	TSEN54	96	40.417	ENSSMAG00000012449	tsen54	99	41.720	Scophthalmus_maximus
ENSHGLG00100005497	TSEN54	97	44.925	ENSSDUG00000021506	tsen54	97	44.925	Seriola_dumerili
ENSHGLG00100005497	TSEN54	97	44.737	ENSSLDG00000016303	tsen54	97	44.737	Seriola_lalandi_dorsalis
ENSHGLG00100005497	TSEN54	86	52.113	ENSSPUG00000008988	TSEN54	100	51.467	Sphenodon_punctatus
ENSHGLG00100005497	TSEN54	80	42.790	ENSSPAG00000008047	tsen54	99	42.790	Stegastes_partitus
ENSHGLG00100005497	TSEN54	92	45.325	ENSSPAG00000008098	-	99	45.325	Stegastes_partitus
ENSHGLG00100005497	TSEN54	100	83.239	ENSSSCG00000036852	TSEN54	100	83.992	Sus_scrofa
ENSHGLG00100005497	TSEN54	86	52.434	ENSTGUG00000008548	TSEN54	100	52.434	Taeniopygia_guttata
ENSHGLG00100005497	TSEN54	97	44.747	ENSTRUG00000004230	tsen54	96	44.942	Takifugu_rubripes
ENSHGLG00100005497	TSEN54	77	61.538	ENSTNIG00000011281	tsen54	97	45.850	Tetraodon_nigroviridis
ENSHGLG00100005497	TSEN54	86	83.406	ENSTTRG00000015828	TSEN54	100	84.061	Tursiops_truncatus
ENSHGLG00100005497	TSEN54	81	80.930	ENSUAMG00000010045	TSEN54	100	80.930	Ursus_americanus
ENSHGLG00100005497	TSEN54	83	81.306	ENSUMAG00000008979	TSEN54	100	80.930	Ursus_maritimus
ENSHGLG00100005497	TSEN54	98	81.888	ENSVVUG00000011411	TSEN54	98	82.524	Vulpes_vulpes
ENSHGLG00100005497	TSEN54	99	48.399	ENSXETG00000012532	tsen54	99	66.667	Xenopus_tropicalis
ENSHGLG00100005497	TSEN54	97	42.829	ENSXCOG00000018245	tsen54	99	43.222	Xiphophorus_couchianus
ENSHGLG00100005497	TSEN54	97	46.435	ENSXMAG00000018818	tsen54	96	46.821	Xiphophorus_maculatus