EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100005535 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 24863 bases
Position: chrJH204775.1:2889128-2913990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100007398	SF3b1	PF08920.10	4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100007494	-	3846	-	ENSHGLP00100007398	1281 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100005535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100005535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100005535	-	99	97.992	ENSG00000115524	SF3B1	99	97.992	Homo_sapiens
ENSHGLG00100005535	-	99	91.724	ENSAPOG00000011894	sf3b1	99	91.590	Acanthochromis_polyacanthus
ENSHGLG00100005535	-	99	97.546	ENSAMEG00000013809	SF3B1	99	97.546	Ailuropoda_melanoleuca
ENSHGLG00100005535	-	99	91.174	ENSACIG00000020910	sf3b1	96	91.021	Amphilophus_citrinellus
ENSHGLG00100005535	-	99	91.590	ENSAOCG00000004478	sf3b1	99	91.590	Amphiprion_ocellaris
ENSHGLG00100005535	-	99	91.590	ENSAPEG00000012937	sf3b1	99	91.590	Amphiprion_percula
ENSHGLG00100005535	-	99	91.718	ENSATEG00000020435	sf3b1	99	91.718	Anabas_testudineus
ENSHGLG00100005535	-	99	97.079	ENSAPLG00000003993	SF3B1	99	97.079	Anas_platyrhynchos
ENSHGLG00100005535	-	99	96.911	ENSACAG00000009612	SF3B1	99	96.911	Anolis_carolinensis
ENSHGLG00100005535	-	99	97.992	ENSANAG00000021577	SF3B1	100	97.755	Aotus_nancymaae
ENSHGLG00100005535	-	99	90.819	ENSACLG00000023470	sf3b1	99	90.666	Astatotilapia_calliptera
ENSHGLG00100005535	-	99	92.119	ENSAMXG00000002219	sf3b1	99	91.966	Astyanax_mexicanus
ENSHGLG00100005535	-	99	97.915	ENSBTAG00000008915	SF3B1	99	97.915	Bos_taurus
ENSHGLG00100005535	-	98	64.781	WBGene00011605	sftb-1	98	64.857	Caenorhabditis_elegans
ENSHGLG00100005535	-	99	97.992	ENSCJAG00000003902	SF3B1	99	97.992	Callithrix_jacchus
ENSHGLG00100005535	-	99	97.992	ENSCAFG00000010826	SF3B1	99	97.992	Canis_familiaris
ENSHGLG00100005535	-	99	97.992	ENSCAFG00020004750	SF3B1	99	97.992	Canis_lupus_dingo
ENSHGLG00100005535	-	99	97.915	ENSCHIG00000015226	SF3B1	99	97.915	Capra_hircus
ENSHGLG00100005535	-	99	97.915	ENSTSYG00000009214	SF3B1	99	97.915	Carlito_syrichta
ENSHGLG00100005535	-	99	97.992	ENSCAPG00000006547	SF3B1	99	97.992	Cavia_aperea
ENSHGLG00100005535	-	99	97.992	ENSCPOG00000009353	SF3B1	100	97.991	Cavia_porcellus
ENSHGLG00100005535	-	99	97.992	ENSCCAG00000020506	SF3B1	99	97.992	Cebus_capucinus
ENSHGLG00100005535	-	99	97.992	ENSCATG00000035735	SF3B1	99	97.992	Cercocebus_atys
ENSHGLG00100005535	-	99	97.621	ENSCLAG00000014767	SF3B1	99	97.621	Chinchilla_lanigera
ENSHGLG00100005535	-	99	97.992	ENSCSAG00000011505	SF3B1	99	97.992	Chlorocebus_sabaeus
ENSHGLG00100005535	-	77	98.214	ENSCHOG00000009860	SF3B1	75	98.182	Choloepus_hoffmanni
ENSHGLG00100005535	-	99	97.220	ENSCPBG00000021902	SF3B1	98	98.909	Chrysemys_picta_bellii
ENSHGLG00100005535	-	70	77.729	ENSCING00000002558	-	99	78.436	Ciona_intestinalis
ENSHGLG00100005535	-	99	78.311	ENSCSAVG00000002559	-	99	78.065	Ciona_savignyi
ENSHGLG00100005535	-	100	97.395	ENSCANG00000029415	SF3B1	99	97.992	Colobus_angolensis_palliatus
ENSHGLG00100005535	-	99	97.992	ENSCGRG00001016990	Sf3b1	99	97.992	Cricetulus_griseus_chok1gshd
ENSHGLG00100005535	-	99	97.992	ENSCGRG00000005301	Sf3b1	99	97.992	Cricetulus_griseus_crigri
ENSHGLG00100005535	-	99	88.104	ENSCSEG00000003860	sf3b1	99	87.951	Cynoglossus_semilaevis
ENSHGLG00100005535	-	95	91.561	ENSCVAG00000003680	sf3b1	99	91.561	Cyprinodon_variegatus
ENSHGLG00100005535	-	99	91.590	ENSDARG00000056138	sf3b1	99	91.514	Danio_rerio
ENSHGLG00100005535	-	99	97.917	ENSDNOG00000011754	SF3B1	99	97.917	Dasypus_novemcinctus
ENSHGLG00100005535	-	99	95.290	ENSDORG00000002399	Sf3b1	100	95.290	Dipodomys_ordii
ENSHGLG00100005535	-	99	75.056	FBgn0031266	Sf3b1	99	75.056	Drosophila_melanogaster
ENSHGLG00100005535	-	84	99.072	ENSETEG00000009188	SF3B1	100	99.072	Echinops_telfairi
ENSHGLG00100005535	-	99	85.506	ENSEBUG00000004325	sf3b1	100	88.194	Eptatretus_burgeri
ENSHGLG00100005535	-	99	97.915	ENSEASG00005020159	SF3B1	97	97.915	Equus_asinus_asinus
ENSHGLG00100005535	-	99	97.915	ENSECAG00000021657	SF3B1	97	97.915	Equus_caballus
ENSHGLG00100005535	-	88	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSHGLG00100005535	-	99	91.109	ENSELUG00000005977	sf3b1	97	90.957	Esox_lucius
ENSHGLG00100005535	-	99	97.992	ENSFCAG00000005038	SF3B1	99	97.992	Felis_catus
ENSHGLG00100005535	-	99	97.086	ENSFALG00000004281	SF3B1	99	97.086	Ficedula_albicollis
ENSHGLG00100005535	-	99	97.992	ENSFDAG00000017510	SF3B1	99	97.992	Fukomys_damarensis
ENSHGLG00100005535	-	99	90.902	ENSFHEG00000014333	sf3b1	99	90.902	Fundulus_heteroclitus
ENSHGLG00100005535	-	99	91.494	ENSGMOG00000006773	sf3b1	99	91.494	Gadus_morhua
ENSHGLG00100005535	-	99	97.375	ENSGALG00000008038	SF3B1	99	97.375	Gallus_gallus
ENSHGLG00100005535	-	98	91.435	ENSGAFG00000000704	sf3b1	99	91.435	Gambusia_affinis
ENSHGLG00100005535	-	99	91.635	ENSGACG00000008839	sf3b1	99	91.635	Gasterosteus_aculeatus
ENSHGLG00100005535	-	99	97.220	ENSGAGG00000017478	SF3B1	99	97.220	Gopherus_agassizii
ENSHGLG00100005535	-	99	91.174	ENSGGOG00000009264	SF3B1	99	92.231	Gorilla_gorilla
ENSHGLG00100005535	-	99	90.881	ENSHBUG00000007705	sf3b1	99	90.728	Haplochromis_burtoni
ENSHGLG00100005535	-	100	98.008	ENSHGLG00000008285	-	100	98.008	Heterocephalus_glaber_female
ENSHGLG00100005535	-	99	91.027	ENSHCOG00000016775	sf3b1	99	90.875	Hippocampus_comes
ENSHGLG00100005535	-	99	91.966	ENSIPUG00000013171	sf3b1	99	91.966	Ictalurus_punctatus
ENSHGLG00100005535	-	99	97.992	ENSSTOG00000011034	SF3B1	99	97.992	Ictidomys_tridecemlineatus
ENSHGLG00100005535	-	99	97.907	ENSJJAG00000010903	Sf3b1	99	97.907	Jaculus_jaculus
ENSHGLG00100005535	-	99	91.076	ENSKMAG00000004009	sf3b1	99	90.999	Kryptolebias_marmoratus
ENSHGLG00100005535	-	99	91.545	ENSLBEG00000022208	sf3b1	99	91.391	Labrus_bergylta
ENSHGLG00100005535	-	99	90.099	ENSLACG00000014832	SF3B1	99	90.099	Latimeria_chalumnae
ENSHGLG00100005535	-	99	92.895	ENSLOCG00000003899	sf3b1	99	92.743	Lepisosteus_oculatus
ENSHGLG00100005535	-	99	97.992	ENSLAFG00000001956	SF3B1	99	97.992	Loxodonta_africana
ENSHGLG00100005535	-	99	97.843	ENSMMUG00000022430	SF3B1	99	97.843	Macaca_mulatta
ENSHGLG00100005535	-	100	97.471	ENSMNEG00000042333	SF3B1	100	97.755	Macaca_nemestrina
ENSHGLG00100005535	-	95	91.385	ENSMLEG00000026141	SF3B1	98	91.863	Mandrillus_leucophaeus
ENSHGLG00100005535	-	99	91.584	ENSMAMG00000010241	sf3b1	99	91.584	Mastacembelus_armatus
ENSHGLG00100005535	-	99	90.819	ENSMZEG00005021254	sf3b1	99	90.666	Maylandia_zebra
ENSHGLG00100005535	-	99	96.757	ENSMGAG00000007017	SF3B1	99	96.757	Meleagris_gallopavo
ENSHGLG00100005535	-	99	93.543	ENSMAUG00000009071	Sf3b1	99	93.543	Mesocricetus_auratus
ENSHGLG00100005535	-	99	97.915	ENSMICG00000013879	SF3B1	99	97.915	Microcebus_murinus
ENSHGLG00100005535	-	99	93.236	ENSMOCG00000000455	Sf3b1	100	93.236	Microtus_ochrogaster
ENSHGLG00100005535	-	84	92.818	ENSMMOG00000000475	sf3b1	99	92.818	Mola_mola
ENSHGLG00100005535	-	99	97.297	ENSMODG00000012275	SF3B1	99	97.297	Monodelphis_domestica
ENSHGLG00100005535	-	99	91.507	ENSMALG00000017211	sf3b1	99	91.507	Monopterus_albus
ENSHGLG00100005535	-	99	97.992	MGP_CAROLIEiJ_G0014141	Sf3b1	99	97.992	Mus_caroli
ENSHGLG00100005535	-	99	97.992	ENSMUSG00000025982	Sf3b1	99	97.992	Mus_musculus
ENSHGLG00100005535	-	99	97.992	MGP_SPRETEiJ_G0014947	Sf3b1	99	97.992	Mus_spretus
ENSHGLG00100005535	-	99	97.992	ENSMPUG00000007799	SF3B1	99	97.992	Mustela_putorius_furo
ENSHGLG00100005535	-	99	96.757	ENSMLUG00000000840	SF3B1	99	96.757	Myotis_lucifugus
ENSHGLG00100005535	-	99	97.991	ENSNGAG00000021884	-	99	97.991	Nannospalax_galili
ENSHGLG00100005535	-	99	87.040	ENSNBRG00000015816	sf3b1	99	87.040	Neolamprologus_brichardi
ENSHGLG00100005535	-	99	97.992	ENSNLEG00000006861	SF3B1	99	97.992	Nomascus_leucogenys
ENSHGLG00100005535	-	69	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSHGLG00100005535	-	99	86.023	ENSOPRG00000008596	SF3B1	99	86.023	Ochotona_princeps
ENSHGLG00100005535	-	99	97.992	ENSODEG00000011153	-	99	97.992	Octodon_degus
ENSHGLG00100005535	-	99	90.819	ENSONIG00000013758	sf3b1	99	90.666	Oreochromis_niloticus
ENSHGLG00100005535	-	83	96.587	ENSOCUG00000012722	-	96	96.587	Oryctolagus_cuniculus
ENSHGLG00100005535	-	99	91.354	ENSORLG00000020219	sf3b1	99	91.354	Oryzias_latipes
ENSHGLG00100005535	-	99	91.354	ENSORLG00020001746	sf3b1	99	91.354	Oryzias_latipes_hni
ENSHGLG00100005535	-	64	90.493	ENSORLG00015001759	sf3b1	97	90.493	Oryzias_latipes_hsok
ENSHGLG00100005535	-	99	91.361	ENSOMEG00000019231	sf3b1	99	91.361	Oryzias_melastigma
ENSHGLG00100005535	-	99	97.915	ENSOARG00000015374	SF3B1	99	97.915	Ovis_aries
ENSHGLG00100005535	-	99	97.992	ENSPPAG00000035007	SF3B1	99	97.992	Pan_paniscus
ENSHGLG00100005535	-	99	97.992	ENSPPRG00000009090	SF3B1	99	97.992	Panthera_pardus
ENSHGLG00100005535	-	99	97.992	ENSPTIG00000021557	SF3B1	99	97.992	Panthera_tigris_altaica
ENSHGLG00100005535	-	99	89.453	ENSPTRG00000012771	SF3B1	99	89.453	Pan_troglodytes
ENSHGLG00100005535	-	99	97.992	ENSPANG00000013417	SF3B1	99	97.992	Papio_anubis
ENSHGLG00100005535	-	99	93.027	ENSPKIG00000000784	sf3b1	99	92.874	Paramormyrops_kingsleyae
ENSHGLG00100005535	-	99	95.763	ENSPSIG00000017222	SF3B1	99	95.763	Pelodiscus_sinensis
ENSHGLG00100005535	-	91	93.718	ENSPMGG00000004330	sf3b1	98	93.548	Periophthalmus_magnuspinnatus
ENSHGLG00100005535	-	99	97.992	ENSPEMG00000010699	Sf3b1	100	97.992	Peromyscus_maniculatus_bairdii
ENSHGLG00100005535	-	99	88.456	ENSPMAG00000001311	sf3b1	99	88.609	Petromyzon_marinus
ENSHGLG00100005535	-	99	97.220	ENSPCIG00000010642	SF3B1	99	97.220	Phascolarctos_cinereus
ENSHGLG00100005535	-	99	91.291	ENSPFOG00000000073	sf3b1	99	91.291	Poecilia_formosa
ENSHGLG00100005535	-	99	91.361	ENSPLAG00000002293	sf3b1	99	91.361	Poecilia_latipinna
ENSHGLG00100005535	-	99	91.361	ENSPMEG00000000446	sf3b1	97	91.361	Poecilia_mexicana
ENSHGLG00100005535	-	99	91.437	ENSPREG00000019652	sf3b1	99	91.437	Poecilia_reticulata
ENSHGLG00100005535	-	99	96.442	ENSPPYG00000013044	SF3B1	96	96.442	Pongo_abelii
ENSHGLG00100005535	-	99	97.838	ENSPCAG00000009292	SF3B1	99	97.838	Procavia_capensis
ENSHGLG00100005535	-	99	97.915	ENSPCOG00000024074	SF3B1	99	97.915	Propithecus_coquereli
ENSHGLG00100005535	-	99	97.992	ENSPVAG00000008302	SF3B1	99	97.992	Pteropus_vampyrus
ENSHGLG00100005535	-	99	90.819	ENSPNYG00000014939	sf3b1	99	90.666	Pundamilia_nyererei
ENSHGLG00100005535	-	99	91.966	ENSPNAG00000008288	sf3b1	99	91.966	Pygocentrus_nattereri
ENSHGLG00100005535	-	99	97.992	ENSRNOG00000013516	Sf3b1	99	97.992	Rattus_norvegicus
ENSHGLG00100005535	-	99	94.444	ENSRBIG00000026096	SF3B1	99	94.444	Rhinopithecus_bieti
ENSHGLG00100005535	-	99	97.994	ENSRROG00000031308	SF3B1	99	97.994	Rhinopithecus_roxellana
ENSHGLG00100005535	-	99	97.992	ENSSBOG00000020080	SF3B1	99	97.992	Saimiri_boliviensis_boliviensis
ENSHGLG00100005535	-	99	97.297	ENSSHAG00000017564	SF3B1	99	97.297	Sarcophilus_harrisii
ENSHGLG00100005535	-	99	92.661	ENSSFOG00015021535	sf3b1	99	92.813	Scleropages_formosus
ENSHGLG00100005535	-	99	90.923	ENSSMAG00000013977	sf3b1	98	90.770	Scophthalmus_maximus
ENSHGLG00100005535	-	99	91.354	ENSSDUG00000017422	sf3b1	99	91.354	Seriola_dumerili
ENSHGLG00100005535	-	99	91.278	ENSSLDG00000019495	sf3b1	99	91.278	Seriola_lalandi_dorsalis
ENSHGLG00100005535	-	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSHGLG00100005535	-	99	97.066	ENSSPUG00000000410	SF3B1	99	97.066	Sphenodon_punctatus
ENSHGLG00100005535	-	99	91.660	ENSSPAG00000010451	sf3b1	98	91.660	Stegastes_partitus
ENSHGLG00100005535	-	92	99.322	ENSSSCG00000016075	SF3B1	99	99.725	Sus_scrofa
ENSHGLG00100005535	-	99	97.297	ENSTGUG00000010553	SF3B1	99	97.297	Taeniopygia_guttata
ENSHGLG00100005535	-	99	91.431	ENSTRUG00000015534	sf3b1	99	91.278	Takifugu_rubripes
ENSHGLG00100005535	-	88	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSHGLG00100005535	-	91	91.337	ENSTTRG00000003414	SF3B1	92	91.337	Tursiops_truncatus
ENSHGLG00100005535	-	86	94.926	ENSUAMG00000018506	SF3B1	97	98.919	Ursus_americanus
ENSHGLG00100005535	-	99	97.992	ENSUMAG00000020945	SF3B1	99	97.992	Ursus_maritimus
ENSHGLG00100005535	-	99	89.807	ENSVPAG00000005798	SF3B1	99	89.807	Vicugna_pacos
ENSHGLG00100005535	-	99	97.992	ENSVVUG00000025948	SF3B1	94	97.992	Vulpes_vulpes
ENSHGLG00100005535	-	99	94.749	ENSXETG00000013339	sf3b1	99	94.749	Xenopus_tropicalis
ENSHGLG00100005535	-	99	87.991	ENSXCOG00000018086	sf3b1	99	87.730	Xiphophorus_couchianus
ENSHGLG00100005535	-	99	91.361	ENSXMAG00000007369	sf3b1	99	91.634	Xiphophorus_maculatus