EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100006361 (Gene tree)
Gene ID: -
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 15068 bases
Position: chrJH172234.1:179679-194746
Accession: 101702423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100008541	DUF382	PF04037.13	1.1e-59	1	1
ENSHGLP00100008540	DUF382	PF04037.13	1.1e-59	1	1
ENSHGLP00100008539	DUF382	PF04037.13	1.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100008640	-	4551	-	ENSHGLP00100008539	907 (aa)	-	UPI00034FA74C
ENSHGLT00100008641	-	4282	-	ENSHGLP00100008540	895 (aa)	XP_004852395	A0A0P6IXI2
ENSHGLT00100008642	-	2637	XM_004852340	ENSHGLP00100008541	878 (aa)	XP_004852397	UPI00035020AA

Gene Model

Click here to download ENSHGLG00100006361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100006361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100006361	SF3B2	100	97.989	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSHGLG00100006361	SF3B2	95	69.884	ENSAPOG00000001974	sf3b2	83	74.305	Acanthochromis_polyacanthus
ENSHGLG00100006361	SF3B2	100	97.778	ENSAMEG00000017206	SF3B2	100	97.778	Ailuropoda_melanoleuca
ENSHGLG00100006361	SF3B2	97	67.771	ENSACIG00000000624	sf3b2	87	74.440	Amphilophus_citrinellus
ENSHGLG00100006361	SF3B2	97	70.102	ENSAOCG00000009207	sf3b2	86	75.065	Amphiprion_ocellaris
ENSHGLG00100006361	SF3B2	97	69.697	ENSAPEG00000002762	sf3b2	87	73.333	Amphiprion_percula
ENSHGLG00100006361	SF3B2	100	66.009	ENSACAG00000008615	SF3B2	100	66.409	Anolis_carolinensis
ENSHGLG00100006361	SF3B2	100	98.103	ENSANAG00000029120	SF3B2	100	98.103	Aotus_nancymaae
ENSHGLG00100006361	SF3B2	86	72.903	ENSACLG00000014771	sf3b2	97	68.701	Astatotilapia_calliptera
ENSHGLG00100006361	SF3B2	84	71.671	ENSAMXG00000007929	sf3b2	86	78.110	Astyanax_mexicanus
ENSHGLG00100006361	SF3B2	100	97.442	ENSBTAG00000002778	SF3B2	100	97.442	Bos_taurus
ENSHGLG00100006361	SF3B2	60	51.060	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSHGLG00100006361	SF3B2	100	98.214	ENSCJAG00000001656	SF3B2	100	98.214	Callithrix_jacchus
ENSHGLG00100006361	SF3B2	100	97.884	ENSCAFG00000013033	SF3B2	100	97.884	Canis_familiaris
ENSHGLG00100006361	SF3B2	100	97.884	ENSCAFG00020015382	SF3B2	100	97.884	Canis_lupus_dingo
ENSHGLG00100006361	SF3B2	100	97.550	ENSCHIG00000011211	SF3B2	100	97.550	Capra_hircus
ENSHGLG00100006361	SF3B2	100	98.101	ENSTSYG00000000959	SF3B2	100	98.101	Carlito_syrichta
ENSHGLG00100006361	SF3B2	61	98.947	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSHGLG00100006361	SF3B2	91	98.995	ENSCPOG00000008294	SF3B2	100	98.995	Cavia_porcellus
ENSHGLG00100006361	SF3B2	100	98.214	ENSCCAG00000035256	SF3B2	100	98.214	Cebus_capucinus
ENSHGLG00100006361	SF3B2	100	98.101	ENSCATG00000042240	SF3B2	100	98.101	Cercocebus_atys
ENSHGLG00100006361	SF3B2	100	99.658	ENSCLAG00000016852	SF3B2	100	99.658	Chinchilla_lanigera
ENSHGLG00100006361	SF3B2	100	98.101	ENSCSAG00000008121	SF3B2	100	98.101	Chlorocebus_sabaeus
ENSHGLG00100006361	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	77	91.237	Choloepus_hoffmanni
ENSHGLG00100006361	SF3B2	85	81.641	ENSCPBG00000022465	SF3B2	87	88.401	Chrysemys_picta_bellii
ENSHGLG00100006361	SF3B2	74	59.447	ENSCING00000005665	-	99	60.063	Ciona_intestinalis
ENSHGLG00100006361	SF3B2	71	60.658	ENSCSAVG00000002029	-	99	59.685	Ciona_savignyi
ENSHGLG00100006361	SF3B2	100	98.101	ENSCANG00000039680	SF3B2	100	98.101	Colobus_angolensis_palliatus
ENSHGLG00100006361	SF3B2	100	98.405	ENSCGRG00001015741	Sf3b2	100	98.405	Cricetulus_griseus_chok1gshd
ENSHGLG00100006361	SF3B2	100	98.405	ENSCGRG00000018110	Sf3b2	100	98.405	Cricetulus_griseus_crigri
ENSHGLG00100006361	SF3B2	75	74.551	ENSCSEG00000000230	sf3b2	78	78.549	Cynoglossus_semilaevis
ENSHGLG00100006361	SF3B2	97	68.641	ENSCVAG00000003357	sf3b2	85	74.668	Cyprinodon_variegatus
ENSHGLG00100006361	SF3B2	82	73.124	ENSDARG00000018049	sf3b2	86	74.145	Danio_rerio
ENSHGLG00100006361	SF3B2	100	94.543	ENSDNOG00000009484	SF3B2	100	96.621	Dasypus_novemcinctus
ENSHGLG00100006361	SF3B2	100	97.611	ENSDORG00000002495	Sf3b2	100	97.611	Dipodomys_ordii
ENSHGLG00100006361	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	86	88.889	Echinops_telfairi
ENSHGLG00100006361	SF3B2	98	58.684	ENSEBUG00000013703	sf3b2	99	60.219	Eptatretus_burgeri
ENSHGLG00100006361	SF3B2	100	97.553	ENSEASG00005004508	SF3B2	100	97.553	Equus_asinus_asinus
ENSHGLG00100006361	SF3B2	100	97.553	ENSECAG00000024461	SF3B2	100	97.553	Equus_caballus
ENSHGLG00100006361	SF3B2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSHGLG00100006361	SF3B2	97	67.176	ENSELUG00000005586	sf3b2	86	71.747	Esox_lucius
ENSHGLG00100006361	SF3B2	100	97.996	ENSFCAG00000013289	SF3B2	100	97.996	Felis_catus
ENSHGLG00100006361	SF3B2	80	70.522	ENSFALG00000014653	SF3B2	98	69.058	Ficedula_albicollis
ENSHGLG00100006361	SF3B2	100	98.778	ENSFDAG00000019806	SF3B2	100	98.778	Fukomys_damarensis
ENSHGLG00100006361	SF3B2	84	71.654	ENSFHEG00000020968	sf3b2	86	73.615	Fundulus_heteroclitus
ENSHGLG00100006361	SF3B2	74	78.168	ENSGMOG00000012131	sf3b2	96	80.818	Gadus_morhua
ENSHGLG00100006361	SF3B2	97	68.679	ENSGAFG00000001675	sf3b2	86	73.123	Gambusia_affinis
ENSHGLG00100006361	SF3B2	74	79.231	ENSGACG00000019012	sf3b2	96	80.159	Gasterosteus_aculeatus
ENSHGLG00100006361	SF3B2	100	77.926	ENSGAGG00000023916	SF3B2	100	82.106	Gopherus_agassizii
ENSHGLG00100006361	SF3B2	100	97.989	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSHGLG00100006361	SF3B2	86	73.032	ENSHBUG00000017349	sf3b2	97	68.701	Haplochromis_burtoni
ENSHGLG00100006361	SF3B2	100	100.000	ENSHGLG00000010807	SF3B2	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100006361	SF3B2	97	66.023	ENSHCOG00000016203	sf3b2	97	65.834	Hippocampus_comes
ENSHGLG00100006361	SF3B2	97	65.203	ENSIPUG00000009383	sf3b2	85	71.616	Ictalurus_punctatus
ENSHGLG00100006361	SF3B2	100	98.883	ENSSTOG00000028892	SF3B2	100	98.883	Ictidomys_tridecemlineatus
ENSHGLG00100006361	SF3B2	100	98.184	ENSJJAG00000018193	Sf3b2	100	98.184	Jaculus_jaculus
ENSHGLG00100006361	SF3B2	60	87.970	ENSKMAG00000020181	sf3b2	84	74.079	Kryptolebias_marmoratus
ENSHGLG00100006361	SF3B2	97	68.879	ENSLBEG00000027739	sf3b2	88	79.467	Labrus_bergylta
ENSHGLG00100006361	SF3B2	79	81.034	ENSLACG00000010429	SF3B2	98	72.830	Latimeria_chalumnae
ENSHGLG00100006361	SF3B2	100	97.276	ENSLAFG00000002128	SF3B2	100	97.276	Loxodonta_africana
ENSHGLG00100006361	SF3B2	100	97.991	ENSMFAG00000003064	SF3B2	100	97.991	Macaca_fascicularis
ENSHGLG00100006361	SF3B2	100	93.743	ENSMMUG00000011743	SF3B2	100	93.743	Macaca_mulatta
ENSHGLG00100006361	SF3B2	100	97.989	ENSMNEG00000034437	SF3B2	100	97.989	Macaca_nemestrina
ENSHGLG00100006361	SF3B2	100	97.877	ENSMLEG00000029373	SF3B2	100	97.877	Mandrillus_leucophaeus
ENSHGLG00100006361	SF3B2	84	74.613	ENSMAMG00000014103	sf3b2	86	75.000	Mastacembelus_armatus
ENSHGLG00100006361	SF3B2	86	72.903	ENSMZEG00005020789	sf3b2	86	74.708	Maylandia_zebra
ENSHGLG00100006361	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSHGLG00100006361	SF3B2	100	97.877	ENSMICG00000008565	-	100	97.877	Microcebus_murinus
ENSHGLG00100006361	SF3B2	100	94.426	ENSMICG00000016942	-	97	94.426	Microcebus_murinus
ENSHGLG00100006361	SF3B2	100	98.292	ENSMOCG00000003136	Sf3b2	100	98.292	Microtus_ochrogaster
ENSHGLG00100006361	SF3B2	97	66.061	ENSMMOG00000012928	sf3b2	86	72.288	Mola_mola
ENSHGLG00100006361	SF3B2	72	88.031	ENSMODG00000025020	-	99	87.087	Monodelphis_domestica
ENSHGLG00100006361	SF3B2	85	91.126	ENSMODG00000008490	-	92	92.971	Monodelphis_domestica
ENSHGLG00100006361	SF3B2	86	70.573	ENSMALG00000015137	sf3b2	84	73.433	Monopterus_albus
ENSHGLG00100006361	SF3B2	100	97.608	MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.608	Mus_caroli
ENSHGLG00100006361	SF3B2	100	98.064	ENSMUSG00000024853	Sf3b2	100	98.064	Mus_musculus
ENSHGLG00100006361	SF3B2	100	98.064	MGP_PahariEiJ_G0014036	Sf3b2	100	98.064	Mus_pahari
ENSHGLG00100006361	SF3B2	100	97.950	MGP_SPRETEiJ_G0023453	Sf3b2	100	97.950	Mus_spretus
ENSHGLG00100006361	SF3B2	100	97.773	ENSMPUG00000011349	SF3B2	100	97.773	Mustela_putorius_furo
ENSHGLG00100006361	SF3B2	100	96.885	ENSMLUG00000011136	SF3B2	100	96.885	Myotis_lucifugus
ENSHGLG00100006361	SF3B2	100	98.519	ENSNGAG00000012103	Sf3b2	100	98.519	Nannospalax_galili
ENSHGLG00100006361	SF3B2	100	92.146	ENSNLEG00000006007	SF3B2	100	91.300	Nomascus_leucogenys
ENSHGLG00100006361	SF3B2	77	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
ENSHGLG00100006361	SF3B2	100	95.672	ENSODEG00000017764	SF3B2	100	95.672	Octodon_degus
ENSHGLG00100006361	SF3B2	97	67.640	ENSONIG00000013068	sf3b2	87	75.626	Oreochromis_niloticus
ENSHGLG00100006361	SF3B2	87	81.491	ENSOANG00000012482	SF3B2	97	81.867	Ornithorhynchus_anatinus
ENSHGLG00100006361	SF3B2	100	92.626	ENSOCUG00000015722	-	100	92.626	Oryctolagus_cuniculus
ENSHGLG00100006361	SF3B2	62	65.619	ENSOCUG00000024154	-	100	65.804	Oryctolagus_cuniculus
ENSHGLG00100006361	SF3B2	97	67.230	ENSORLG00000008235	sf3b2	85	74.346	Oryzias_latipes
ENSHGLG00100006361	SF3B2	97	67.230	ENSORLG00020005357	sf3b2	88	74.346	Oryzias_latipes_hni
ENSHGLG00100006361	SF3B2	97	67.342	ENSORLG00015022454	sf3b2	82	78.006	Oryzias_latipes_hsok
ENSHGLG00100006361	SF3B2	97	65.914	ENSOMEG00000017480	sf3b2	88	73.822	Oryzias_melastigma
ENSHGLG00100006361	SF3B2	100	91.955	ENSOGAG00000005799	SF3B2	100	92.514	Otolemur_garnettii
ENSHGLG00100006361	SF3B2	100	93.651	ENSOARG00000002125	SF3B2	100	97.967	Ovis_aries
ENSHGLG00100006361	SF3B2	100	97.989	ENSPPAG00000007359	SF3B2	100	97.989	Pan_paniscus
ENSHGLG00100006361	SF3B2	100	97.996	ENSPPRG00000013334	SF3B2	100	97.996	Panthera_pardus
ENSHGLG00100006361	SF3B2	100	97.884	ENSPTIG00000015022	SF3B2	100	97.884	Panthera_tigris_altaica
ENSHGLG00100006361	SF3B2	100	97.989	ENSPTRG00000003912	SF3B2	100	97.989	Pan_troglodytes
ENSHGLG00100006361	SF3B2	100	98.101	ENSPANG00000008593	SF3B2	100	98.101	Papio_anubis
ENSHGLG00100006361	SF3B2	97	67.978	ENSPKIG00000016576	sf3b2	98	68.433	Paramormyrops_kingsleyae
ENSHGLG00100006361	SF3B2	93	80.595	ENSPSIG00000003158	SF3B2	100	88.493	Pelodiscus_sinensis
ENSHGLG00100006361	SF3B2	84	67.102	ENSPMGG00000000819	sf3b2	86	67.628	Periophthalmus_magnuspinnatus
ENSHGLG00100006361	SF3B2	100	98.633	ENSPEMG00000015437	Sf3b2	100	98.633	Peromyscus_maniculatus_bairdii
ENSHGLG00100006361	SF3B2	93	83.681	ENSPEMG00000015451	-	100	83.701	Peromyscus_maniculatus_bairdii
ENSHGLG00100006361	SF3B2	85	90.584	ENSPCIG00000008381	SF3B2	100	89.778	Phascolarctos_cinereus
ENSHGLG00100006361	SF3B2	97	69.064	ENSPFOG00000002552	sf3b2	86	72.727	Poecilia_formosa
ENSHGLG00100006361	SF3B2	97	69.178	ENSPLAG00000001471	sf3b2	86	72.809	Poecilia_latipinna
ENSHGLG00100006361	SF3B2	97	67.694	ENSPMEG00000013180	sf3b2	86	74.045	Poecilia_mexicana
ENSHGLG00100006361	SF3B2	84	72.655	ENSPREG00000002665	sf3b2	86	73.719	Poecilia_reticulata
ENSHGLG00100006361	SF3B2	75	95.827	ENSPPYG00000003034	-	99	95.827	Pongo_abelii
ENSHGLG00100006361	SF3B2	100	96.993	ENSPCAG00000005129	SF3B2	100	96.993	Procavia_capensis
ENSHGLG00100006361	SF3B2	100	97.989	ENSPCOG00000025375	SF3B2	100	97.989	Propithecus_coquereli
ENSHGLG00100006361	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSHGLG00100006361	SF3B2	56	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSHGLG00100006361	SF3B2	81	73.269	ENSPNYG00000023594	sf3b2	92	73.735	Pundamilia_nyererei
ENSHGLG00100006361	SF3B2	97	68.806	ENSPNAG00000001891	sf3b2	86	73.367	Pygocentrus_nattereri
ENSHGLG00100006361	SF3B2	100	98.064	ENSRNOG00000020412	Sf3b2	100	98.064	Rattus_norvegicus
ENSHGLG00100006361	SF3B2	100	97.989	ENSRBIG00000034065	SF3B2	100	97.989	Rhinopithecus_bieti
ENSHGLG00100006361	SF3B2	100	97.989	ENSRROG00000034496	SF3B2	100	97.989	Rhinopithecus_roxellana
ENSHGLG00100006361	SF3B2	100	93.488	ENSSBOG00000026337	SF3B2	100	94.040	Saimiri_boliviensis_boliviensis
ENSHGLG00100006361	SF3B2	96	69.570	ENSSHAG00000018043	-	100	70.233	Sarcophilus_harrisii
ENSHGLG00100006361	SF3B2	85	85.640	ENSSHAG00000010933	-	100	83.739	Sarcophilus_harrisii
ENSHGLG00100006361	SF3B2	97	67.960	ENSSFOG00015021125	sf3b2	97	68.136	Scleropages_formosus
ENSHGLG00100006361	SF3B2	60	87.476	ENSSMAG00000004079	sf3b2	88	75.065	Scophthalmus_maximus
ENSHGLG00100006361	SF3B2	60	87.666	ENSSDUG00000008499	sf3b2	85	71.226	Seriola_dumerili
ENSHGLG00100006361	SF3B2	60	88.235	ENSSLDG00000006838	sf3b2	86	75.294	Seriola_lalandi_dorsalis
ENSHGLG00100006361	SF3B2	53	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSHGLG00100006361	SF3B2	100	80.846	ENSSPUG00000009198	SF3B2	85	84.176	Sphenodon_punctatus
ENSHGLG00100006361	SF3B2	97	67.849	ENSSPAG00000004406	sf3b2	86	74.905	Stegastes_partitus
ENSHGLG00100006361	SF3B2	100	97.216	ENSSSCG00000012957	SF3B2	100	97.216	Sus_scrofa
ENSHGLG00100006361	SF3B2	97	56.214	ENSTRUG00000007611	sf3b2	88	72.370	Takifugu_rubripes
ENSHGLG00100006361	SF3B2	86	70.077	ENSTNIG00000007441	sf3b2	88	69.344	Tetraodon_nigroviridis
ENSHGLG00100006361	SF3B2	91	94.186	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSHGLG00100006361	SF3B2	100	97.550	ENSTTRG00000014339	SF3B2	100	97.550	Tursiops_truncatus
ENSHGLG00100006361	SF3B2	100	95.996	ENSUAMG00000020754	SF3B2	99	97.314	Ursus_americanus
ENSHGLG00100006361	SF3B2	100	97.996	ENSUMAG00000010994	SF3B2	100	97.996	Ursus_maritimus
ENSHGLG00100006361	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	72	99.153	Vicugna_pacos
ENSHGLG00100006361	SF3B2	100	97.773	ENSVVUG00000027029	SF3B2	100	97.773	Vulpes_vulpes
ENSHGLG00100006361	SF3B2	87	71.521	ENSXETG00000008422	sf3b2	87	78.102	Xenopus_tropicalis
ENSHGLG00100006361	SF3B2	72	79.048	ENSXCOG00000008943	sf3b2	84	77.619	Xiphophorus_couchianus
ENSHGLG00100006361	SF3B2	60	87.736	ENSXMAG00000008467	sf3b2	86	72.346	Xiphophorus_maculatus