EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100006388 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 20301 bases
Position: chrJH169129.1:2320768-2341068
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100008575	R3H	PF01424.22	3.3e-16	1	1
ENSHGLP00100008574	R3H	PF01424.22	3.7e-16	1	1
ENSHGLP00100008573	R3H	PF01424.22	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100008675	R3HCC1-202	1698	-	ENSHGLP00100008574	490 (aa)	-	-
ENSHGLT00100008674	R3HCC1-201	1533	-	ENSHGLP00100008573	510 (aa)	-	-
ENSHGLT00100008676	R3HCC1-203	1441	-	ENSHGLP00100008575	477 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100006388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100006388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100006388	R3HCC1	97	72.842	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSHGLG00100006388	R3HCC1	58	46.853	ENSAPOG00000003616	r3hcc1	64	46.575	Acanthochromis_polyacanthus
ENSHGLG00100006388	R3HCC1	94	69.807	ENSAMEG00000002963	R3HCC1	96	69.165	Ailuropoda_melanoleuca
ENSHGLG00100006388	R3HCC1	58	42.254	ENSACIG00000017144	r3hcc1	95	38.217	Amphilophus_citrinellus
ENSHGLG00100006388	R3HCC1	56	47.552	ENSAPEG00000003613	r3hcc1	97	34.204	Amphiprion_percula
ENSHGLG00100006388	R3HCC1	83	30.637	ENSATEG00000023860	r3hcc1	98	31.034	Anabas_testudineus
ENSHGLG00100006388	R3HCC1	90	47.534	ENSACAG00000016627	R3HCC1	96	48.984	Anolis_carolinensis
ENSHGLG00100006388	R3HCC1	94	74.066	ENSANAG00000036169	R3HCC1	98	73.846	Aotus_nancymaae
ENSHGLG00100006388	R3HCC1	94	67.253	ENSBTAG00000025830	R3HCC1	96	68.636	Bos_taurus
ENSHGLG00100006388	R3HCC1	97	72.304	ENSCJAG00000020118	R3HCC1	99	64.920	Callithrix_jacchus
ENSHGLG00100006388	R3HCC1	94	67.912	ENSCAFG00000009210	R3HCC1	95	70.252	Canis_familiaris
ENSHGLG00100006388	R3HCC1	83	65.099	ENSCAFG00020012870	R3HCC1	87	67.742	Canis_lupus_dingo
ENSHGLG00100006388	R3HCC1	91	65.479	ENSCHIG00000009107	R3HCC1	98	64.465	Capra_hircus
ENSHGLG00100006388	R3HCC1	94	74.449	ENSTSYG00000000511	R3HCC1	86	71.976	Carlito_syrichta
ENSHGLG00100006388	R3HCC1	83	68.531	ENSCAPG00000015813	R3HCC1	100	68.531	Cavia_aperea
ENSHGLG00100006388	R3HCC1	91	75.106	ENSCPOG00000009696	R3HCC1	100	75.106	Cavia_porcellus
ENSHGLG00100006388	R3HCC1	97	73.150	ENSCCAG00000037811	R3HCC1	99	71.875	Cebus_capucinus
ENSHGLG00100006388	R3HCC1	97	71.459	ENSCATG00000032971	R3HCC1	97	70.637	Cercocebus_atys
ENSHGLG00100006388	R3HCC1	97	80.810	ENSCLAG00000015556	R3HCC1	85	83.562	Chinchilla_lanigera
ENSHGLG00100006388	R3HCC1	97	71.429	ENSCSAG00000016250	R3HCC1	99	71.667	Chlorocebus_sabaeus
ENSHGLG00100006388	R3HCC1	92	69.180	ENSCHOG00000000396	R3HCC1	96	69.977	Choloepus_hoffmanni
ENSHGLG00100006388	R3HCC1	96	72.591	ENSCANG00000029441	R3HCC1	99	70.833	Colobus_angolensis_palliatus
ENSHGLG00100006388	R3HCC1	92	63.821	ENSCGRG00001014977	R3hcc1	100	63.430	Cricetulus_griseus_chok1gshd
ENSHGLG00100006388	R3HCC1	92	63.821	ENSCGRG00000004454	R3hcc1	100	63.430	Cricetulus_griseus_crigri
ENSHGLG00100006388	R3HCC1	88	33.333	ENSCSEG00000005748	r3hcc1	98	33.099	Cynoglossus_semilaevis
ENSHGLG00100006388	R3HCC1	75	32.000	ENSCVAG00000002640	r3hcc1	95	32.162	Cyprinodon_variegatus
ENSHGLG00100006388	R3HCC1	91	31.891	ENSDARG00000099593	r3hcc1	76	43.506	Danio_rerio
ENSHGLG00100006388	R3HCC1	99	69.602	ENSDNOG00000007168	R3HCC1	99	69.023	Dasypus_novemcinctus
ENSHGLG00100006388	R3HCC1	92	63.489	ENSDORG00000026365	R3hcc1	99	63.505	Dipodomys_ordii
ENSHGLG00100006388	R3HCC1	93	63.355	ENSETEG00000001147	R3HCC1	95	64.055	Echinops_telfairi
ENSHGLG00100006388	R3HCC1	91	72.297	ENSEASG00005018782	R3HCC1	80	72.936	Equus_asinus_asinus
ENSHGLG00100006388	R3HCC1	91	72.297	ENSECAG00000025013	R3HCC1	97	72.936	Equus_caballus
ENSHGLG00100006388	R3HCC1	95	65.502	ENSEEUG00000011918	R3HCC1	96	67.580	Erinaceus_europaeus
ENSHGLG00100006388	R3HCC1	86	35.814	ENSELUG00000023650	r3hcc1	80	41.353	Esox_lucius
ENSHGLG00100006388	R3HCC1	94	70.510	ENSFCAG00000012395	R3HCC1	97	72.562	Felis_catus
ENSHGLG00100006388	R3HCC1	92	81.425	ENSFDAG00000001572	R3HCC1	100	81.425	Fukomys_damarensis
ENSHGLG00100006388	R3HCC1	58	37.143	ENSGMOG00000017590	-	82	37.143	Gadus_morhua
ENSHGLG00100006388	R3HCC1	90	35.747	ENSGAFG00000008747	-	92	34.014	Gambusia_affinis
ENSHGLG00100006388	R3HCC1	90	33.410	ENSGACG00000008447	r3hcc1	96	32.802	Gasterosteus_aculeatus
ENSHGLG00100006388	R3HCC1	82	57.297	ENSGAGG00000018009	R3HCC1	62	61.111	Gopherus_agassizii
ENSHGLG00100006388	R3HCC1	97	72.399	ENSGGOG00000013817	R3HCC1	99	74.713	Gorilla_gorilla
ENSHGLG00100006388	R3HCC1	50	46.316	ENSHBUG00000022250	-	70	46.316	Haplochromis_burtoni
ENSHGLG00100006388	R3HCC1	100	100.000	ENSHGLG00000010517	R3HCC1	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100006388	R3HCC1	89	31.663	ENSHCOG00000011745	r3hcc1	94	33.179	Hippocampus_comes
ENSHGLG00100006388	R3HCC1	94	33.954	ENSIPUG00000024504	r3hcc1	99	33.884	Ictalurus_punctatus
ENSHGLG00100006388	R3HCC1	96	68.008	ENSSTOG00000027130	R3HCC1	86	80.255	Ictidomys_tridecemlineatus
ENSHGLG00100006388	R3HCC1	92	66.314	ENSJJAG00000013075	R3hcc1	99	67.457	Jaculus_jaculus
ENSHGLG00100006388	R3HCC1	84	33.824	ENSKMAG00000000286	r3hcc1	98	32.419	Kryptolebias_marmoratus
ENSHGLG00100006388	R3HCC1	90	39.551	ENSLACG00000011894	R3HCC1	97	38.864	Latimeria_chalumnae
ENSHGLG00100006388	R3HCC1	90	38.952	ENSLOCG00000015442	r3hcc1	99	37.349	Lepisosteus_oculatus
ENSHGLG00100006388	R3HCC1	95	66.531	ENSLAFG00000016137	R3HCC1	96	67.081	Loxodonta_africana
ENSHGLG00100006388	R3HCC1	97	71.338	ENSMFAG00000032894	R3HCC1	93	72.078	Macaca_fascicularis
ENSHGLG00100006388	R3HCC1	97	71.550	ENSMMUG00000016655	R3HCC1	92	74.382	Macaca_mulatta
ENSHGLG00100006388	R3HCC1	97	70.913	ENSMNEG00000043283	R3HCC1	99	65.376	Macaca_nemestrina
ENSHGLG00100006388	R3HCC1	97	71.579	ENSMLEG00000030147	R3HCC1	99	71.875	Mandrillus_leucophaeus
ENSHGLG00100006388	R3HCC1	84	31.159	ENSMAMG00000018146	r3hcc1	98	32.374	Mastacembelus_armatus
ENSHGLG00100006388	R3HCC1	92	44.835	ENSMGAG00000001356	R3HCC1	92	46.347	Meleagris_gallopavo
ENSHGLG00100006388	R3HCC1	92	65.263	ENSMAUG00000016096	R3hcc1	100	64.000	Mesocricetus_auratus
ENSHGLG00100006388	R3HCC1	95	72.198	ENSMICG00000011146	R3HCC1	94	76.027	Microcebus_murinus
ENSHGLG00100006388	R3HCC1	52	67.181	ENSMOCG00000018508	R3hcc1	100	60.204	Microtus_ochrogaster
ENSHGLG00100006388	R3HCC1	90	46.341	ENSMODG00000016809	-	100	48.198	Monodelphis_domestica
ENSHGLG00100006388	R3HCC1	84	32.407	ENSMALG00000000731	r3hcc1	98	31.604	Monopterus_albus
ENSHGLG00100006388	R3HCC1	92	63.473	MGP_CAROLIEiJ_G0019467	R3hcc1	83	78.882	Mus_caroli
ENSHGLG00100006388	R3HCC1	92	62.874	ENSMUSG00000034194	R3hcc1	83	77.358	Mus_musculus
ENSHGLG00100006388	R3HCC1	92	60.630	MGP_PahariEiJ_G0030484	R3hcc1	83	77.019	Mus_pahari
ENSHGLG00100006388	R3HCC1	92	62.351	MGP_SPRETEiJ_G0020359	R3hcc1	83	77.358	Mus_spretus
ENSHGLG00100006388	R3HCC1	92	69.820	ENSMPUG00000003457	R3HCC1	90	68.722	Mustela_putorius_furo
ENSHGLG00100006388	R3HCC1	98	67.437	ENSMLUG00000000266	R3HCC1	97	68.026	Myotis_lucifugus
ENSHGLG00100006388	R3HCC1	92	70.806	ENSNGAG00000016747	R3hcc1	99	71.242	Nannospalax_galili
ENSHGLG00100006388	R3HCC1	89	71.230	ENSNLEG00000015944	R3HCC1	90	71.327	Nomascus_leucogenys
ENSHGLG00100006388	R3HCC1	91	55.730	ENSMEUG00000010587	R3HCC1	98	56.064	Notamacropus_eugenii
ENSHGLG00100006388	R3HCC1	95	64.706	ENSOPRG00000013390	R3HCC1	96	65.982	Ochotona_princeps
ENSHGLG00100006388	R3HCC1	90	72.979	ENSODEG00000007529	R3HCC1	100	74.735	Octodon_degus
ENSHGLG00100006388	R3HCC1	92	53.761	ENSOANG00000013877	R3HCC1	98	55.580	Ornithorhynchus_anatinus
ENSHGLG00100006388	R3HCC1	91	68.397	ENSOCUG00000023554	R3HCC1	86	67.574	Oryctolagus_cuniculus
ENSHGLG00100006388	R3HCC1	84	33.170	ENSORLG00000016816	r3hcc1	97	33.577	Oryzias_latipes
ENSHGLG00100006388	R3HCC1	84	33.415	ENSORLG00020012005	r3hcc1	97	33.577	Oryzias_latipes_hni
ENSHGLG00100006388	R3HCC1	84	33.741	ENSORLG00015007018	r3hcc1	97	33.577	Oryzias_latipes_hsok
ENSHGLG00100006388	R3HCC1	86	33.095	ENSOMEG00000000816	r3hcc1	99	34.223	Oryzias_melastigma
ENSHGLG00100006388	R3HCC1	96	69.742	ENSOGAG00000001291	R3HCC1	98	68.842	Otolemur_garnettii
ENSHGLG00100006388	R3HCC1	92	67.785	ENSOARG00000010146	R3HCC1	97	68.182	Ovis_aries
ENSHGLG00100006388	R3HCC1	97	72.632	ENSPPAG00000033165	R3HCC1	99	74.032	Pan_paniscus
ENSHGLG00100006388	R3HCC1	91	71.233	ENSPPRG00000002522	R3HCC1	99	73.023	Panthera_pardus
ENSHGLG00100006388	R3HCC1	84	68.564	ENSPTIG00000011230	R3HCC1	95	70.455	Panthera_tigris_altaica
ENSHGLG00100006388	R3HCC1	97	73.263	ENSPTRG00000020076	R3HCC1	99	71.875	Pan_troglodytes
ENSHGLG00100006388	R3HCC1	97	71.158	ENSPANG00000000453	R3HCC1	99	71.875	Papio_anubis
ENSHGLG00100006388	R3HCC1	82	36.750	ENSPKIG00000014426	-	95	36.750	Paramormyrops_kingsleyae
ENSHGLG00100006388	R3HCC1	82	37.250	ENSPKIG00000020397	-	94	38.243	Paramormyrops_kingsleyae
ENSHGLG00100006388	R3HCC1	92	45.629	ENSPSIG00000017664	R3HCC1	99	46.204	Pelodiscus_sinensis
ENSHGLG00100006388	R3HCC1	92	65.217	ENSPEMG00000007118	R3hcc1	100	64.596	Peromyscus_maniculatus_bairdii
ENSHGLG00100006388	R3HCC1	83	51.090	ENSPCIG00000022718	-	83	52.369	Phascolarctos_cinereus
ENSHGLG00100006388	R3HCC1	90	35.321	ENSPFOG00000022301	r3hcc1	91	33.790	Poecilia_formosa
ENSHGLG00100006388	R3HCC1	90	35.147	ENSPLAG00000010794	r3hcc1	92	33.787	Poecilia_latipinna
ENSHGLG00100006388	R3HCC1	90	35.321	ENSPMEG00000022515	r3hcc1	91	33.790	Poecilia_mexicana
ENSHGLG00100006388	R3HCC1	90	34.884	ENSPREG00000000713	r3hcc1	91	34.884	Poecilia_reticulata
ENSHGLG00100006388	R3HCC1	85	71.913	ENSPPYG00000018436	R3HCC1	99	72.840	Pongo_abelii
ENSHGLG00100006388	R3HCC1	72	80.000	ENSPCAG00000012229	R3HCC1	74	80.000	Procavia_capensis
ENSHGLG00100006388	R3HCC1	91	74.091	ENSPCOG00000027554	R3HCC1	98	75.694	Propithecus_coquereli
ENSHGLG00100006388	R3HCC1	94	70.175	ENSPVAG00000009829	R3HCC1	96	71.071	Pteropus_vampyrus
ENSHGLG00100006388	R3HCC1	87	34.783	ENSPNAG00000023875	r3hcc1	99	34.236	Pygocentrus_nattereri
ENSHGLG00100006388	R3HCC1	92	74.049	ENSRBIG00000028045	R3HCC1	99	74.943	Rhinopithecus_bieti
ENSHGLG00100006388	R3HCC1	97	72.939	ENSRROG00000031126	R3HCC1	99	66.970	Rhinopithecus_roxellana
ENSHGLG00100006388	R3HCC1	92	73.378	ENSSBOG00000022590	R3HCC1	99	74.260	Saimiri_boliviensis_boliviensis
ENSHGLG00100006388	R3HCC1	91	47.835	ENSSHAG00000016526	-	65	68.000	Sarcophilus_harrisii
ENSHGLG00100006388	R3HCC1	84	38.084	ENSSFOG00015013507	r3hcc1	98	37.624	Scleropages_formosus
ENSHGLG00100006388	R3HCC1	84	33.571	ENSSMAG00000008647	r3hcc1	98	31.719	Scophthalmus_maximus
ENSHGLG00100006388	R3HCC1	89	33.181	ENSSDUG00000022786	r3hcc1	97	33.410	Seriola_dumerili
ENSHGLG00100006388	R3HCC1	89	33.638	ENSSLDG00000019031	r3hcc1	97	33.638	Seriola_lalandi_dorsalis
ENSHGLG00100006388	R3HCC1	86	32.938	ENSSPAG00000013497	r3hcc1	97	32.938	Stegastes_partitus
ENSHGLG00100006388	R3HCC1	93	62.693	ENSSSCG00000037347	-	95	60.851	Sus_scrofa
ENSHGLG00100006388	R3HCC1	96	68.058	ENSSSCG00000039915	-	97	68.103	Sus_scrofa
ENSHGLG00100006388	R3HCC1	88	31.808	ENSTRUG00000015880	r3hcc1	98	31.364	Takifugu_rubripes
ENSHGLG00100006388	R3HCC1	91	65.158	ENSTTRG00000012247	R3HCC1	95	65.207	Tursiops_truncatus
ENSHGLG00100006388	R3HCC1	91	70.159	ENSUAMG00000007344	R3HCC1	99	70.805	Ursus_americanus
ENSHGLG00100006388	R3HCC1	94	68.803	ENSVVUG00000005056	R3HCC1	95	70.938	Vulpes_vulpes
ENSHGLG00100006388	R3HCC1	86	34.058	ENSXCOG00000017626	r3hcc1	88	35.122	Xiphophorus_couchianus
ENSHGLG00100006388	R3HCC1	90	33.634	ENSXMAG00000018375	r3hcc1	91	34.624	Xiphophorus_maculatus