EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100006614 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 77927 bases
Position: chrJH170067.1:208322-286248
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100008888	RNA_pol_Rpb1_5	PF04998.17	3.1e-103	1	1
ENSHGLP00100008889	RNA_pol_Rpb1_5	PF04998.17	3.2e-103	1	1
ENSHGLP00100008889	RNA_pol_Rpb1_4	PF05000.17	1.8e-24	1	1
ENSHGLP00100008888	RNA_pol_Rpb1_4	PF05000.17	1.8e-24	1	1
ENSHGLP00100008889	RNA_pol_Rpb1_2	PF00623.20	1.4e-66	1	1
ENSHGLP00100008888	RNA_pol_Rpb1_2	PF00623.20	1.4e-66	1	1
ENSHGLP00100008888	RNA_pol_Rpb1_3	PF04983.18	5e-37	1	1
ENSHGLP00100008889	RNA_pol_Rpb1_3	PF04983.18	5e-37	1	1
ENSHGLP00100008889	RNA_pol_Rpb1_1	PF04997.12	2.8e-22	1	1
ENSHGLP00100008888	RNA_pol_Rpb1_1	PF04997.12	5.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100008992	POLR1A-201	5169	-	ENSHGLP00100008888	1722 (aa)	-	-
ENSHGLT00100008993	POLR1A-202	5154	-	ENSHGLP00100008889	1717 (aa)	-	UPI00034F7446

Gene Model

Click here to download ENSHGLG00100006614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100006614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100006614	POLR1A	88	31.410	ENSHGLG00100014843	POLR2A	53	35.795
ENSHGLG00100006614	POLR1A	60	33.898	ENSHGLG00100008483	POLR3A	68	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100006614	POLR1A	100	88.535	ENSG00000068654	POLR1A	100	88.246	Homo_sapiens
ENSHGLG00100006614	POLR1A	69	67.364	ENSAPOG00000017945	polr1a	99	67.364	Acanthochromis_polyacanthus
ENSHGLG00100006614	POLR1A	100	89.333	ENSAMEG00000005807	POLR1A	100	91.335	Ailuropoda_melanoleuca
ENSHGLG00100006614	POLR1A	100	63.589	ENSACIG00000022147	polr1a	100	63.006	Amphilophus_citrinellus
ENSHGLG00100006614	POLR1A	100	65.953	ENSAOCG00000017336	polr1a	100	68.358	Amphiprion_ocellaris
ENSHGLG00100006614	POLR1A	94	73.611	ENSAPEG00000016105	polr1a	98	73.611	Amphiprion_percula
ENSHGLG00100006614	POLR1A	100	66.551	ENSATEG00000016773	polr1a	100	65.827	Anabas_testudineus
ENSHGLG00100006614	POLR1A	86	71.736	ENSAPLG00000013871	POLR1A	99	71.930	Anas_platyrhynchos
ENSHGLG00100006614	POLR1A	99	68.464	ENSACAG00000012141	POLR1A	99	68.439	Anolis_carolinensis
ENSHGLG00100006614	POLR1A	100	87.543	ENSANAG00000033927	POLR1A	100	87.833	Aotus_nancymaae
ENSHGLG00100006614	POLR1A	100	62.862	ENSACLG00000020541	polr1a	100	62.761	Astatotilapia_calliptera
ENSHGLG00100006614	POLR1A	100	88.225	ENSBTAG00000006481	POLR1A	100	88.225	Bos_taurus
ENSHGLG00100006614	POLR1A	99	38.717	WBGene00012999	rpoa-1	98	38.245	Caenorhabditis_elegans
ENSHGLG00100006614	POLR1A	100	86.856	ENSCJAG00000019547	POLR1A	100	87.067	Callithrix_jacchus
ENSHGLG00100006614	POLR1A	100	89.675	ENSCAFG00000007613	POLR1A	100	89.675	Canis_familiaris
ENSHGLG00100006614	POLR1A	100	89.693	ENSCAFG00020014752	POLR1A	100	89.693	Canis_lupus_dingo
ENSHGLG00100006614	POLR1A	100	87.689	ENSCHIG00000018204	POLR1A	100	87.515	Capra_hircus
ENSHGLG00100006614	POLR1A	100	87.246	ENSTSYG00000002761	POLR1A	100	86.949	Carlito_syrichta
ENSHGLG00100006614	POLR1A	97	88.577	ENSCAPG00000010132	POLR1A	100	88.577	Cavia_aperea
ENSHGLG00100006614	POLR1A	100	93.481	ENSCPOG00000012350	POLR1A	100	93.481	Cavia_porcellus
ENSHGLG00100006614	POLR1A	100	87.435	ENSCCAG00000019839	POLR1A	100	87.609	Cebus_capucinus
ENSHGLG00100006614	POLR1A	100	89.288	ENSCATG00000029786	POLR1A	100	88.998	Cercocebus_atys
ENSHGLG00100006614	POLR1A	100	94.032	ENSCLAG00000005187	POLR1A	100	94.032	Chinchilla_lanigera
ENSHGLG00100006614	POLR1A	100	88.767	ENSCSAG00000016251	POLR1A	100	88.940	Chlorocebus_sabaeus
ENSHGLG00100006614	POLR1A	99	74.782	ENSCPBG00000001115	POLR1A	99	74.782	Chrysemys_picta_bellii
ENSHGLG00100006614	POLR1A	99	47.002	ENSCSAVG00000007184	-	91	55.240	Ciona_savignyi
ENSHGLG00100006614	POLR1A	100	86.111	ENSCANG00000031785	POLR1A	100	86.111	Colobus_angolensis_palliatus
ENSHGLG00100006614	POLR1A	100	84.968	ENSCGRG00001006651	Polr1a	100	84.968	Cricetulus_griseus_chok1gshd
ENSHGLG00100006614	POLR1A	60	89.561	ENSCGRG00000010834	Polr1a	100	89.561	Cricetulus_griseus_crigri
ENSHGLG00100006614	POLR1A	100	62.057	ENSCSEG00000020190	polr1a	100	61.941	Cynoglossus_semilaevis
ENSHGLG00100006614	POLR1A	100	64.376	ENSCVAG00000020941	polr1a	100	64.014	Cyprinodon_variegatus
ENSHGLG00100006614	POLR1A	100	66.551	ENSDARG00000098375	polr1a	100	66.570	Danio_rerio
ENSHGLG00100006614	POLR1A	100	82.356	ENSDNOG00000010829	POLR1A	100	82.356	Dasypus_novemcinctus
ENSHGLG00100006614	POLR1A	100	88.998	ENSDORG00000008298	Polr1a	100	88.882	Dipodomys_ordii
ENSHGLG00100006614	POLR1A	72	96.875	ENSETEG00000000412	-	72	96.875	Echinops_telfairi
ENSHGLG00100006614	POLR1A	89	47.222	ENSEBUG00000005667	-	99	47.739	Eptatretus_burgeri
ENSHGLG00100006614	POLR1A	100	89.988	ENSEASG00005001625	POLR1A	100	90.162	Equus_asinus_asinus
ENSHGLG00100006614	POLR1A	100	89.931	ENSECAG00000010092	POLR1A	100	92.054	Equus_caballus
ENSHGLG00100006614	POLR1A	100	89.931	ENSECAG00000036306	-	100	92.054	Equus_caballus
ENSHGLG00100006614	POLR1A	100	89.931	ENSECAG00000030510	-	100	92.054	Equus_caballus
ENSHGLG00100006614	POLR1A	85	94.681	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSHGLG00100006614	POLR1A	100	65.917	ENSELUG00000012769	polr1a	99	65.563	Esox_lucius
ENSHGLG00100006614	POLR1A	100	89.159	ENSFCAG00000008966	POLR1A	100	89.159	Felis_catus
ENSHGLG00100006614	POLR1A	99	71.093	ENSFALG00000010082	POLR1A	99	71.093	Ficedula_albicollis
ENSHGLG00100006614	POLR1A	100	94.590	ENSFDAG00000013726	POLR1A	100	94.474	Fukomys_damarensis
ENSHGLG00100006614	POLR1A	100	62.260	ENSFHEG00000005996	polr1a	100	62.413	Fundulus_heteroclitus
ENSHGLG00100006614	POLR1A	100	59.919	ENSGMOG00000002230	polr1a	100	59.965	Gadus_morhua
ENSHGLG00100006614	POLR1A	91	68.849	ENSGALG00000038160	-	99	69.315	Gallus_gallus
ENSHGLG00100006614	POLR1A	100	64.385	ENSGAFG00000015266	polr1a	100	64.137	Gambusia_affinis
ENSHGLG00100006614	POLR1A	100	63.890	ENSGACG00000018791	polr1a	100	63.771	Gasterosteus_aculeatus
ENSHGLG00100006614	POLR1A	89	75.339	ENSGAGG00000004984	-	95	81.084	Gopherus_agassizii
ENSHGLG00100006614	POLR1A	100	88.535	ENSGGOG00000001788	POLR1A	100	88.246	Gorilla_gorilla
ENSHGLG00100006614	POLR1A	90	64.066	ENSHBUG00000020021	polr1a	98	64.615	Haplochromis_burtoni
ENSHGLG00100006614	POLR1A	100	99.709	ENSHGLG00000006334	POLR1A	100	99.709	Heterocephalus_glaber_female
ENSHGLG00100006614	POLR1A	100	62.269	ENSHCOG00000003345	polr1a	100	62.047	Hippocampus_comes
ENSHGLG00100006614	POLR1A	100	65.681	ENSIPUG00000013174	polr1a	100	65.147	Ictalurus_punctatus
ENSHGLG00100006614	POLR1A	100	87.718	ENSSTOG00000012580	POLR1A	100	87.784	Ictidomys_tridecemlineatus
ENSHGLG00100006614	POLR1A	100	90.116	ENSJJAG00000013113	Polr1a	100	90.116	Jaculus_jaculus
ENSHGLG00100006614	POLR1A	100	65.601	ENSKMAG00000007399	polr1a	100	65.078	Kryptolebias_marmoratus
ENSHGLG00100006614	POLR1A	94	68.869	ENSLBEG00000015401	polr1a	99	67.753	Labrus_bergylta
ENSHGLG00100006614	POLR1A	54	75.784	ENSLACG00000003218	polr1a	100	75.784	Latimeria_chalumnae
ENSHGLG00100006614	POLR1A	100	70.874	ENSLOCG00000010881	polr1a	100	70.874	Lepisosteus_oculatus
ENSHGLG00100006614	POLR1A	100	87.789	ENSLAFG00000014948	POLR1A	100	87.616	Loxodonta_africana
ENSHGLG00100006614	POLR1A	100	88.940	ENSMFAG00000046097	POLR1A	100	89.114	Macaca_fascicularis
ENSHGLG00100006614	POLR1A	100	88.825	ENSMMUG00000015815	POLR1A	100	88.998	Macaca_mulatta
ENSHGLG00100006614	POLR1A	100	88.940	ENSMNEG00000043313	POLR1A	100	89.114	Macaca_nemestrina
ENSHGLG00100006614	POLR1A	100	88.072	ENSMLEG00000042428	POLR1A	100	88.246	Mandrillus_leucophaeus
ENSHGLG00100006614	POLR1A	100	66.396	ENSMAMG00000016565	polr1a	100	66.338	Mastacembelus_armatus
ENSHGLG00100006614	POLR1A	100	66.049	ENSMZEG00005004915	polr1a	100	66.067	Maylandia_zebra
ENSHGLG00100006614	POLR1A	99	68.279	ENSMGAG00000013111	POLR1A	99	69.182	Meleagris_gallopavo
ENSHGLG00100006614	POLR1A	92	89.614	ENSMAUG00000008497	Polr1a	100	89.614	Mesocricetus_auratus
ENSHGLG00100006614	POLR1A	100	88.773	ENSMICG00000000757	POLR1A	100	88.657	Microcebus_murinus
ENSHGLG00100006614	POLR1A	100	88.624	ENSMOCG00000000122	Polr1a	100	88.624	Microtus_ochrogaster
ENSHGLG00100006614	POLR1A	100	65.233	ENSMMOG00000010216	polr1a	100	64.563	Mola_mola
ENSHGLG00100006614	POLR1A	100	65.411	ENSMALG00000013363	polr1a	100	64.966	Monopterus_albus
ENSHGLG00100006614	POLR1A	100	87.645	MGP_CAROLIEiJ_G0028494	Polr1a	100	87.297	Mus_caroli
ENSHGLG00100006614	POLR1A	100	87.529	ENSMUSG00000049553	Polr1a	100	87.413	Mus_musculus
ENSHGLG00100006614	POLR1A	100	88.566	MGP_PahariEiJ_G0022230	Polr1a	100	88.160	Mus_pahari
ENSHGLG00100006614	POLR1A	100	85.804	MGP_SPRETEiJ_G0029499	Polr1a	100	86.325	Mus_spretus
ENSHGLG00100006614	POLR1A	100	89.971	ENSMPUG00000009135	POLR1A	100	89.971	Mustela_putorius_furo
ENSHGLG00100006614	POLR1A	100	87.651	ENSMLUG00000015723	POLR1A	100	87.702	Myotis_lucifugus
ENSHGLG00100006614	POLR1A	100	89.211	ENSNGAG00000017907	Polr1a	100	89.153	Nannospalax_galili
ENSHGLG00100006614	POLR1A	100	66.125	ENSNBRG00000000519	polr1a	100	66.125	Neolamprologus_brichardi
ENSHGLG00100006614	POLR1A	100	86.859	ENSNLEG00000002264	POLR1A	100	86.801	Nomascus_leucogenys
ENSHGLG00100006614	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSHGLG00100006614	POLR1A	99	82.356	ENSOPRG00000008269	POLR1A	100	82.422	Ochotona_princeps
ENSHGLG00100006614	POLR1A	100	93.659	ENSODEG00000003542	POLR1A	100	94.124	Octodon_degus
ENSHGLG00100006614	POLR1A	100	66.203	ENSONIG00000015895	polr1a	100	66.146	Oreochromis_niloticus
ENSHGLG00100006614	POLR1A	100	89.831	ENSOCUG00000010138	POLR1A	100	90.006	Oryctolagus_cuniculus
ENSHGLG00100006614	POLR1A	100	65.258	ENSORLG00000008753	polr1a	99	64.951	Oryzias_latipes
ENSHGLG00100006614	POLR1A	100	64.005	ENSORLG00020020726	polr1a	99	63.353	Oryzias_latipes_hni
ENSHGLG00100006614	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSHGLG00100006614	POLR1A	100	88.709	ENSOGAG00000004031	POLR1A	100	88.477	Otolemur_garnettii
ENSHGLG00100006614	POLR1A	100	87.853	ENSOARG00000020601	POLR1A	100	88.201	Ovis_aries
ENSHGLG00100006614	POLR1A	100	88.303	ENSPPAG00000042450	POLR1A	100	88.014	Pan_paniscus
ENSHGLG00100006614	POLR1A	100	89.217	ENSPPRG00000006702	POLR1A	100	89.217	Panthera_pardus
ENSHGLG00100006614	POLR1A	100	88.992	ENSPTIG00000018783	POLR1A	100	88.992	Panthera_tigris_altaica
ENSHGLG00100006614	POLR1A	100	88.072	ENSPTRG00000012147	POLR1A	100	87.840	Pan_troglodytes
ENSHGLG00100006614	POLR1A	100	89.172	ENSPANG00000025908	POLR1A	100	88.882	Papio_anubis
ENSHGLG00100006614	POLR1A	94	74.306	ENSPKIG00000005468	polr1a	99	74.306	Paramormyrops_kingsleyae
ENSHGLG00100006614	POLR1A	63	69.530	ENSPSIG00000009321	-	99	72.037	Pelodiscus_sinensis
ENSHGLG00100006614	POLR1A	55	67.728	ENSPMGG00000009718	polr1a	95	67.728	Periophthalmus_magnuspinnatus
ENSHGLG00100006614	POLR1A	100	89.559	ENSPEMG00000022224	Polr1a	100	89.385	Peromyscus_maniculatus_bairdii
ENSHGLG00100006614	POLR1A	95	79.403	ENSPCIG00000004222	POLR1A	99	79.005	Phascolarctos_cinereus
ENSHGLG00100006614	POLR1A	100	64.348	ENSPFOG00000005025	polr1a	100	64.522	Poecilia_formosa
ENSHGLG00100006614	POLR1A	100	64.716	ENSPLAG00000021389	polr1a	100	64.542	Poecilia_latipinna
ENSHGLG00100006614	POLR1A	100	62.688	ENSPMEG00000006463	polr1a	100	62.869	Poecilia_mexicana
ENSHGLG00100006614	POLR1A	100	64.426	ENSPREG00000002389	polr1a	100	64.542	Poecilia_reticulata
ENSHGLG00100006614	POLR1A	100	88.303	ENSPPYG00000012217	POLR1A	100	88.014	Pongo_abelii
ENSHGLG00100006614	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSHGLG00100006614	POLR1A	100	88.773	ENSPCOG00000026987	POLR1A	100	88.831	Propithecus_coquereli
ENSHGLG00100006614	POLR1A	95	88.321	ENSPVAG00000012674	POLR1A	95	87.719	Pteropus_vampyrus
ENSHGLG00100006614	POLR1A	100	66.049	ENSPNYG00000000026	polr1a	100	66.067	Pundamilia_nyererei
ENSHGLG00100006614	POLR1A	100	66.014	ENSPNAG00000019223	polr1a	99	68.617	Pygocentrus_nattereri
ENSHGLG00100006614	POLR1A	100	88.973	ENSRNOG00000009545	Polr1a	100	88.973	Rattus_norvegicus
ENSHGLG00100006614	POLR1A	100	88.188	ENSRBIG00000028335	POLR1A	100	88.361	Rhinopithecus_bieti
ENSHGLG00100006614	POLR1A	100	88.130	ENSRROG00000031473	POLR1A	100	88.303	Rhinopithecus_roxellana
ENSHGLG00100006614	POLR1A	99	36.661	YOR341W	RPA190	99	36.759	Saccharomyces_cerevisiae
ENSHGLG00100006614	POLR1A	100	86.914	ENSSBOG00000030262	POLR1A	100	87.087	Saimiri_boliviensis_boliviensis
ENSHGLG00100006614	POLR1A	100	73.245	ENSSHAG00000014739	POLR1A	100	73.245	Sarcophilus_harrisii
ENSHGLG00100006614	POLR1A	100	67.768	ENSSFOG00015019716	polr1a	100	67.695	Scleropages_formosus
ENSHGLG00100006614	POLR1A	100	65.612	ENSSMAG00000014342	polr1a	100	65.245	Scophthalmus_maximus
ENSHGLG00100006614	POLR1A	100	66.821	ENSSDUG00000014631	polr1a	100	66.340	Seriola_dumerili
ENSHGLG00100006614	POLR1A	100	64.968	ENSSLDG00000024095	polr1a	100	64.496	Seriola_lalandi_dorsalis
ENSHGLG00100006614	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSHGLG00100006614	POLR1A	100	70.250	ENSSPUG00000004215	POLR1A	98	76.923	Sphenodon_punctatus
ENSHGLG00100006614	POLR1A	64	71.493	ENSSPAG00000016341	polr1a	94	71.493	Stegastes_partitus
ENSHGLG00100006614	POLR1A	83	89.944	ENSSSCG00000008226	POLR1A	99	89.916	Sus_scrofa
ENSHGLG00100006614	POLR1A	99	70.619	ENSTGUG00000010704	POLR1A	100	70.560	Taeniopygia_guttata
ENSHGLG00100006614	POLR1A	100	63.998	ENSTRUG00000002210	polr1a	99	63.600	Takifugu_rubripes
ENSHGLG00100006614	POLR1A	100	60.161	ENSTNIG00000010116	polr1a	100	60.161	Tetraodon_nigroviridis
ENSHGLG00100006614	POLR1A	74	94.372	ENSTBEG00000008646	POLR1A	74	94.372	Tupaia_belangeri
ENSHGLG00100006614	POLR1A	100	84.522	ENSTTRG00000008597	POLR1A	100	84.580	Tursiops_truncatus
ENSHGLG00100006614	POLR1A	69	88.776	ENSUAMG00000012158	-	94	88.776	Ursus_americanus
ENSHGLG00100006614	POLR1A	100	88.979	ENSUMAG00000006700	POLR1A	100	88.979	Ursus_maritimus
ENSHGLG00100006614	POLR1A	100	89.501	ENSVVUG00000001245	POLR1A	100	89.501	Vulpes_vulpes
ENSHGLG00100006614	POLR1A	100	67.088	ENSXETG00000001952	polr1a	100	68.667	Xenopus_tropicalis
ENSHGLG00100006614	POLR1A	100	64.658	ENSXMAG00000004032	polr1a	100	64.832	Xiphophorus_maculatus