EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100007218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 18902 bases
Position: chrJH167378.1:1045883-1064784
Accession: 101696935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100009737	PPR	PF01535.20	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100009848	-	2287	-	ENSHGLP00100009737	703 (aa)	XP_004840562	UPI00034F58FB

Gene Model

Click here to download ENSHGLG00100007218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100007218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100007218	-	100	76.521	ENSG00000106246	PTCD1	100	76.662	Homo_sapiens
ENSHGLG00100007218	-	100	76.521	ENSG00000248919	ATP5MF-PTCD1	93	76.662	Homo_sapiens
ENSHGLG00100007218	-	81	47.469	ENSAPOG00000010679	ptcd1	87	47.972	Acanthochromis_polyacanthus
ENSHGLG00100007218	-	100	78.470	ENSAMEG00000006224	-	93	78.470	Ailuropoda_melanoleuca
ENSHGLG00100007218	-	88	48.804	ENSACIG00000017861	ptcd1	88	48.166	Amphilophus_citrinellus
ENSHGLG00100007218	-	84	47.236	ENSAOCG00000022617	ptcd1	84	48.014	Amphiprion_ocellaris
ENSHGLG00100007218	-	92	46.386	ENSAOCG00000020741	-	88	47.059	Amphiprion_ocellaris
ENSHGLG00100007218	-	92	46.235	ENSAPEG00000022632	ptcd1	88	46.904	Amphiprion_percula
ENSHGLG00100007218	-	83	51.092	ENSATEG00000007016	ptcd1	82	50.332	Anabas_testudineus
ENSHGLG00100007218	-	86	60.263	ENSAPLG00000006862	-	95	60.263	Anas_platyrhynchos
ENSHGLG00100007218	-	100	55.633	ENSACAG00000012871	-	93	55.494	Anolis_carolinensis
ENSHGLG00100007218	-	97	76.087	ENSANAG00000035790	-	99	76.232	Aotus_nancymaae
ENSHGLG00100007218	-	88	47.059	ENSACLG00000002824	ptcd1	82	47.954	Astatotilapia_calliptera
ENSHGLG00100007218	-	86	47.874	ENSAMXG00000037292	ptcd1	94	47.470	Astyanax_mexicanus
ENSHGLG00100007218	-	100	76.346	ENSBTAG00000020440	-	87	76.771	Bos_taurus
ENSHGLG00100007218	-	100	75.565	ENSCJAG00000015815	-	100	75.706	Callithrix_jacchus
ENSHGLG00100007218	-	100	76.695	ENSCAFG00000015055	-	93	76.695	Canis_familiaris
ENSHGLG00100007218	-	100	76.695	ENSCAFG00020014480	-	93	76.695	Canis_lupus_dingo
ENSHGLG00100007218	-	100	75.921	ENSCHIG00000027000	-	99	76.346	Capra_hircus
ENSHGLG00100007218	-	100	78.501	ENSTSYG00000029495	-	100	78.501	Carlito_syrichta
ENSHGLG00100007218	-	93	84.067	ENSCAPG00000014660	-	100	84.067	Cavia_aperea
ENSHGLG00100007218	-	100	85.127	ENSCPOG00000001780	-	100	85.127	Cavia_porcellus
ENSHGLG00100007218	-	100	74.048	ENSCCAG00000034025	-	100	74.753	Cebus_capucinus
ENSHGLG00100007218	-	100	76.062	ENSCATG00000040859	-	100	76.204	Cercocebus_atys
ENSHGLG00100007218	-	98	87.770	ENSCLAG00000006354	-	100	87.535	Chinchilla_lanigera
ENSHGLG00100007218	-	91	76.316	ENSCSAG00000017794	-	95	76.471	Chlorocebus_sabaeus
ENSHGLG00100007218	-	89	60.550	ENSCPBG00000020866	-	85	61.526	Chrysemys_picta_bellii
ENSHGLG00100007218	-	100	75.994	ENSCANG00000023441	-	100	75.994	Colobus_angolensis_palliatus
ENSHGLG00100007218	-	100	75.177	ENSCGRG00001023686	Ptcd1	100	75.177	Cricetulus_griseus_chok1gshd
ENSHGLG00100007218	-	99	75.565	ENSCGRG00000015031	Ptcd1	100	75.565	Cricetulus_griseus_crigri
ENSHGLG00100007218	-	88	45.295	ENSCSEG00000002378	ptcd1	80	46.769	Cynoglossus_semilaevis
ENSHGLG00100007218	-	89	47.161	ENSCVAG00000003621	ptcd1	92	46.299	Cyprinodon_variegatus
ENSHGLG00100007218	-	88	47.687	ENSCVAG00000015826	ptcd1	89	45.732	Cyprinodon_variegatus
ENSHGLG00100007218	-	87	48.470	ENSDARG00000076176	ptcd1	88	48.943	Danio_rerio
ENSHGLG00100007218	-	100	75.668	ENSDNOG00000009957	-	100	75.668	Dasypus_novemcinctus
ENSHGLG00100007218	-	99	74.499	ENSDORG00000000740	Ptcd1	100	74.785	Dipodomys_ordii
ENSHGLG00100007218	-	91	41.202	ENSEBUG00000014515	ptcd1	97	43.304	Eptatretus_burgeri
ENSHGLG00100007218	-	100	79.073	ENSEASG00005002480	-	100	78.933	Equus_asinus_asinus
ENSHGLG00100007218	-	100	79.044	ENSECAG00000016617	-	100	79.044	Equus_caballus
ENSHGLG00100007218	-	96	44.726	ENSELUG00000016517	ptcd1	94	44.818	Esox_lucius
ENSHGLG00100007218	-	100	78.169	ENSFCAG00000015069	-	100	78.169	Felis_catus
ENSHGLG00100007218	-	94	57.122	ENSFALG00000013803	-	93	57.692	Ficedula_albicollis
ENSHGLG00100007218	-	100	87.624	ENSFDAG00000006393	-	100	87.624	Fukomys_damarensis
ENSHGLG00100007218	-	77	47.080	ENSFHEG00000012491	ptcd1	90	47.080	Fundulus_heteroclitus
ENSHGLG00100007218	-	86	46.787	ENSGMOG00000007639	ptcd1	95	46.787	Gadus_morhua
ENSHGLG00100007218	-	85	59.319	ENSGALG00000004711	-	86	59.643	Gallus_gallus
ENSHGLG00100007218	-	84	48.744	ENSGAFG00000013175	ptcd1	82	48.316	Gambusia_affinis
ENSHGLG00100007218	-	85	50.163	ENSGACG00000016607	ptcd1	91	50.163	Gasterosteus_aculeatus
ENSHGLG00100007218	-	85	59.016	ENSGAGG00000021832	-	85	60.445	Gopherus_agassizii
ENSHGLG00100007218	-	99	76.346	ENSGGOG00000015123	-	99	76.487	Gorilla_gorilla
ENSHGLG00100007218	-	88	47.059	ENSHBUG00000018275	ptcd1	82	47.954	Haplochromis_burtoni
ENSHGLG00100007218	-	100	100.000	ENSHGLG00000017621	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100007218	-	83	47.611	ENSHCOG00000010784	ptcd1	82	47.521	Hippocampus_comes
ENSHGLG00100007218	-	100	76.512	ENSSTOG00000001682	-	100	76.512	Ictidomys_tridecemlineatus
ENSHGLG00100007218	-	100	76.062	ENSJJAG00000000319	Ptcd1	100	75.779	Jaculus_jaculus
ENSHGLG00100007218	-	84	48.667	ENSKMAG00000008708	ptcd1	80	49.069	Kryptolebias_marmoratus
ENSHGLG00100007218	-	89	48.189	ENSLBEG00000008061	ptcd1	86	48.504	Labrus_bergylta
ENSHGLG00100007218	-	85	59.046	ENSLACG00000011172	ptcd1	83	59.667	Latimeria_chalumnae
ENSHGLG00100007218	-	93	52.709	ENSLOCG00000004833	ptcd1	95	54.221	Lepisosteus_oculatus
ENSHGLG00100007218	-	100	71.148	ENSLAFG00000002588	-	100	71.770	Loxodonta_africana
ENSHGLG00100007218	-	100	75.921	ENSMFAG00000041324	-	100	76.062	Macaca_fascicularis
ENSHGLG00100007218	-	100	75.779	ENSMMUG00000030408	-	100	75.921	Macaca_mulatta
ENSHGLG00100007218	-	100	75.921	ENSMNEG00000043786	-	100	76.062	Macaca_nemestrina
ENSHGLG00100007218	-	100	58.074	ENSMLEG00000031179	-	100	60.057	Mandrillus_leucophaeus
ENSHGLG00100007218	-	94	47.605	ENSMAMG00000007623	ptcd1	90	47.455	Mastacembelus_armatus
ENSHGLG00100007218	-	88	47.059	ENSMZEG00005012722	ptcd1	82	48.361	Maylandia_zebra
ENSHGLG00100007218	-	98	56.143	ENSMGAG00000004211	-	92	56.143	Meleagris_gallopavo
ENSHGLG00100007218	-	100	75.637	ENSMICG00000017428	-	100	75.955	Microcebus_murinus
ENSHGLG00100007218	-	88	47.702	ENSMMOG00000020243	ptcd1	90	47.967	Mola_mola
ENSHGLG00100007218	-	99	59.482	ENSMODG00000001350	-	99	59.072	Monodelphis_domestica
ENSHGLG00100007218	-	84	50.498	ENSMALG00000018442	ptcd1	80	50.761	Monopterus_albus
ENSHGLG00100007218	-	99	76.868	MGP_CAROLIEiJ_G0028011	Ptcd1	99	76.868	Mus_caroli
ENSHGLG00100007218	-	99	75.862	ENSMUSG00000029624	Ptcd1	99	76.149	Mus_musculus
ENSHGLG00100007218	-	99	76.149	MGP_PahariEiJ_G0024580	Ptcd1	99	76.149	Mus_pahari
ENSHGLG00100007218	-	99	76.293	MGP_SPRETEiJ_G0029012	Ptcd1	99	76.580	Mus_spretus
ENSHGLG00100007218	-	100	77.904	ENSMPUG00000016518	-	100	77.904	Mustela_putorius_furo
ENSHGLG00100007218	-	100	79.718	ENSMLUG00000010994	-	94	80.000	Myotis_lucifugus
ENSHGLG00100007218	-	88	47.745	ENSNBRG00000010079	ptcd1	90	47.434	Neolamprologus_brichardi
ENSHGLG00100007218	-	100	78.986	ENSNLEG00000011060	-	100	78.986	Nomascus_leucogenys
ENSHGLG00100007218	-	97	62.069	ENSMEUG00000006930	-	99	62.069	Notamacropus_eugenii
ENSHGLG00100007218	-	90	75.174	ENSOPRG00000013647	-	90	75.174	Ochotona_princeps
ENSHGLG00100007218	-	85	46.481	ENSONIG00000003168	ptcd1	97	46.470	Oreochromis_niloticus
ENSHGLG00100007218	-	81	58.549	ENSOANG00000007728	-	73	59.464	Ornithorhynchus_anatinus
ENSHGLG00100007218	-	99	73.475	ENSOCUG00000010584	-	98	73.475	Oryctolagus_cuniculus
ENSHGLG00100007218	-	87	48.792	ENSORLG00000009275	ptcd1	87	48.792	Oryzias_latipes
ENSHGLG00100007218	-	87	48.475	ENSORLG00020000988	ptcd1	87	47.910	Oryzias_latipes_hni
ENSHGLG00100007218	-	87	48.226	ENSORLG00015010557	ptcd1	87	48.226	Oryzias_latipes_hsok
ENSHGLG00100007218	-	88	49.758	ENSOMEG00000020627	ptcd1	89	49.677	Oryzias_melastigma
ENSHGLG00100007218	-	98	74.425	ENSOGAG00000010877	-	99	74.425	Otolemur_garnettii
ENSHGLG00100007218	-	100	71.570	ENSOARG00000018676	-	100	71.994	Ovis_aries
ENSHGLG00100007218	-	100	77.021	ENSPPAG00000036024	-	100	77.163	Pan_paniscus
ENSHGLG00100007218	-	100	78.470	ENSPPRG00000003478	-	100	78.470	Panthera_pardus
ENSHGLG00100007218	-	100	77.021	ENSPTRG00000019452	-	100	77.163	Pan_troglodytes
ENSHGLG00100007218	-	100	76.062	ENSPANG00000016730	-	100	76.204	Papio_anubis
ENSHGLG00100007218	-	95	49.856	ENSPKIG00000014215	ptcd1	96	51.420	Paramormyrops_kingsleyae
ENSHGLG00100007218	-	84	59.699	ENSPSIG00000011184	-	100	60.267	Pelodiscus_sinensis
ENSHGLG00100007218	-	73	42.614	ENSPMAG00000009667	ptcd1	100	42.614	Petromyzon_marinus
ENSHGLG00100007218	-	99	59.728	ENSPCIG00000024778	-	99	59.728	Phascolarctos_cinereus
ENSHGLG00100007218	-	89	47.261	ENSPFOG00000004458	ptcd1	87	47.105	Poecilia_formosa
ENSHGLG00100007218	-	89	46.948	ENSPLAG00000011051	ptcd1	87	46.948	Poecilia_latipinna
ENSHGLG00100007218	-	89	47.418	ENSPMEG00000020547	ptcd1	87	47.261	Poecilia_mexicana
ENSHGLG00100007218	-	88	47.059	ENSPREG00000000059	ptcd1	87	46.688	Poecilia_reticulata
ENSHGLG00100007218	-	93	78.135	ENSPPYG00000017377	-	99	78.135	Pongo_abelii
ENSHGLG00100007218	-	81	76.596	ENSPCAG00000001852	-	89	76.596	Procavia_capensis
ENSHGLG00100007218	-	100	76.629	ENSPCOG00000018596	-	100	76.945	Propithecus_coquereli
ENSHGLG00100007218	-	66	90.000	ENSPVAG00000007529	-	72	90.000	Pteropus_vampyrus
ENSHGLG00100007218	-	88	46.904	ENSPNYG00000019993	ptcd1	82	48.197	Pundamilia_nyererei
ENSHGLG00100007218	-	88	51.266	ENSPNAG00000014931	ptcd1	92	50.231	Pygocentrus_nattereri
ENSHGLG00100007218	-	99	75.287	ENSRNOG00000000987	Ptcd1	99	75.287	Rattus_norvegicus
ENSHGLG00100007218	-	100	76.278	ENSRBIG00000043393	-	100	76.278	Rhinopithecus_bieti
ENSHGLG00100007218	-	100	76.136	ENSRROG00000036420	-	100	76.136	Rhinopithecus_roxellana
ENSHGLG00100007218	-	100	75.672	ENSSBOG00000024114	-	100	75.813	Saimiri_boliviensis_boliviensis
ENSHGLG00100007218	-	99	58.550	ENSSHAG00000011376	-	99	62.443	Sarcophilus_harrisii
ENSHGLG00100007218	-	92	52.774	ENSSFOG00015007909	ptcd1	89	52.303	Scleropages_formosus
ENSHGLG00100007218	-	87	47.240	ENSSMAG00000000218	ptcd1	94	47.386	Scophthalmus_maximus
ENSHGLG00100007218	-	97	45.507	ENSSDUG00000015671	ptcd1	94	45.217	Seriola_dumerili
ENSHGLG00100007218	-	87	47.987	ENSSLDG00000014261	ptcd1	87	47.504	Seriola_lalandi_dorsalis
ENSHGLG00100007218	-	92	55.090	ENSSPUG00000003540	-	90	55.090	Sphenodon_punctatus
ENSHGLG00100007218	-	90	47.287	ENSSPAG00000011049	ptcd1	86	47.442	Stegastes_partitus
ENSHGLG00100007218	-	92	79.538	ENSSSCG00000007622	-	99	78.614	Sus_scrofa
ENSHGLG00100007218	-	86	61.111	ENSTGUG00000007563	-	98	62.023	Taeniopygia_guttata
ENSHGLG00100007218	-	85	48.997	ENSTRUG00000013471	ptcd1	81	48.997	Takifugu_rubripes
ENSHGLG00100007218	-	85	49.502	ENSTNIG00000008271	ptcd1	83	50.085	Tetraodon_nigroviridis
ENSHGLG00100007218	-	100	74.471	ENSTBEG00000011021	-	100	74.471	Tupaia_belangeri
ENSHGLG00100007218	-	100	76.629	ENSTTRG00000003006	-	100	76.629	Tursiops_truncatus
ENSHGLG00100007218	-	100	78.187	ENSUAMG00000008049	-	100	78.187	Ursus_americanus
ENSHGLG00100007218	-	99	76.738	ENSVVUG00000008836	-	100	76.738	Vulpes_vulpes
ENSHGLG00100007218	-	84	54.209	ENSXETG00000009891	ptcd1	87	53.125	Xenopus_tropicalis
ENSHGLG00100007218	-	89	46.226	ENSXMAG00000015540	ptcd1	87	46.069	Xiphophorus_maculatus