EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100007281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 19189 bases
Position: chrJH170895.1:417589-436777
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100009816	SRP54	PF00448.22	9.2e-23	1	2
ENSHGLP00100009816	SRP54	PF00448.22	9.2e-23	2	2
ENSHGLP00100009816	SRP54_N	PF02881.19	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100009927	-	1248	-	ENSHGLP00100009816	415 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100007281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100007281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100007281	-	100	69.109	ENSHGLG00100005263	SRP54	100	69.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100007281	-	100	69.109	ENSG00000100883	SRP54	100	81.395	Homo_sapiens
ENSHGLG00100007281	-	100	66.733	ENSAPOG00000011314	srp54	100	66.733	Acanthochromis_polyacanthus
ENSHGLG00100007281	-	100	69.109	ENSAMEG00000015544	SRP54	100	69.109	Ailuropoda_melanoleuca
ENSHGLG00100007281	-	88	63.778	ENSACIG00000022831	srp54	97	63.778	Amphilophus_citrinellus
ENSHGLG00100007281	-	100	66.733	ENSAOCG00000019401	srp54	100	66.733	Amphiprion_ocellaris
ENSHGLG00100007281	-	100	66.733	ENSAPEG00000001977	srp54	100	66.733	Amphiprion_percula
ENSHGLG00100007281	-	100	66.931	ENSATEG00000013877	srp54	100	66.931	Anabas_testudineus
ENSHGLG00100007281	-	93	66.105	ENSAPLG00000010125	SRP54	95	66.105	Anas_platyrhynchos
ENSHGLG00100007281	-	100	68.119	ENSACAG00000002103	-	100	68.119	Anolis_carolinensis
ENSHGLG00100007281	-	63	60.883	ENSACAG00000001124	-	100	60.883	Anolis_carolinensis
ENSHGLG00100007281	-	87	66.207	ENSACAG00000010631	-	100	66.207	Anolis_carolinensis
ENSHGLG00100007281	-	100	69.109	ENSANAG00000022133	SRP54	100	69.109	Aotus_nancymaae
ENSHGLG00100007281	-	100	66.931	ENSACLG00000015866	srp54	100	66.931	Astatotilapia_calliptera
ENSHGLG00100007281	-	100	66.535	ENSAMXG00000032669	SRP54	100	66.535	Astyanax_mexicanus
ENSHGLG00100007281	-	100	69.109	ENSBTAG00000019085	SRP54	100	69.109	Bos_taurus
ENSHGLG00100007281	-	98	49.499	WBGene00009012	F21D5.7	100	49.499	Caenorhabditis_elegans
ENSHGLG00100007281	-	100	69.109	ENSCJAG00000006581	SRP54	100	69.109	Callithrix_jacchus
ENSHGLG00100007281	-	100	69.109	ENSCAFG00000013331	SRP54	100	69.109	Canis_familiaris
ENSHGLG00100007281	-	100	69.109	ENSCAFG00020023427	SRP54	100	69.109	Canis_lupus_dingo
ENSHGLG00100007281	-	100	69.109	ENSCHIG00000026345	SRP54	100	69.109	Capra_hircus
ENSHGLG00100007281	-	100	68.911	ENSTSYG00000002680	-	100	68.911	Carlito_syrichta
ENSHGLG00100007281	-	93	61.771	ENSTSYG00000035333	-	93	61.771	Carlito_syrichta
ENSHGLG00100007281	-	93	46.104	ENSCAPG00000008780	SRP54	100	46.104	Cavia_aperea
ENSHGLG00100007281	-	100	68.911	ENSCPOG00000003691	SRP54	100	68.911	Cavia_porcellus
ENSHGLG00100007281	-	100	63.804	ENSCCAG00000024179	SRP54	100	69.048	Cebus_capucinus
ENSHGLG00100007281	-	100	69.109	ENSCATG00000034083	SRP54	100	69.109	Cercocebus_atys
ENSHGLG00100007281	-	100	69.109	ENSCLAG00000015076	SRP54	100	69.109	Chinchilla_lanigera
ENSHGLG00100007281	-	100	69.109	ENSCSAG00000015575	SRP54	100	69.109	Chlorocebus_sabaeus
ENSHGLG00100007281	-	94	58.921	ENSCHOG00000008986	SRP54	100	58.921	Choloepus_hoffmanni
ENSHGLG00100007281	-	100	68.317	ENSCPBG00000026195	SRP54	100	68.317	Chrysemys_picta_bellii
ENSHGLG00100007281	-	100	57.426	ENSCING00000007380	-	100	57.426	Ciona_intestinalis
ENSHGLG00100007281	-	100	69.109	ENSCANG00000028532	SRP54	100	69.109	Colobus_angolensis_palliatus
ENSHGLG00100007281	-	100	68.911	ENSCGRG00001009525	-	100	68.911	Cricetulus_griseus_chok1gshd
ENSHGLG00100007281	-	75	66.839	ENSCGRG00000009453	-	89	66.839	Cricetulus_griseus_crigri
ENSHGLG00100007281	-	100	66.337	ENSCSEG00000012392	srp54	100	66.337	Cynoglossus_semilaevis
ENSHGLG00100007281	-	100	66.535	ENSCVAG00000010395	srp54	100	66.535	Cyprinodon_variegatus
ENSHGLG00100007281	-	100	66.931	ENSDARG00000098367	srp54	100	66.931	Danio_rerio
ENSHGLG00100007281	-	100	69.109	ENSDNOG00000032525	SRP54	100	69.109	Dasypus_novemcinctus
ENSHGLG00100007281	-	88	56.208	ENSDORG00000005159	-	97	56.208	Dipodomys_ordii
ENSHGLG00100007281	-	95	53.498	FBgn0010747	Srp54k	98	53.707	Drosophila_melanogaster
ENSHGLG00100007281	-	80	47.120	ENSETEG00000012102	-	97	47.120	Echinops_telfairi
ENSHGLG00100007281	-	100	68.119	ENSETEG00000016307	-	100	68.119	Echinops_telfairi
ENSHGLG00100007281	-	100	61.188	ENSEBUG00000009437	-	100	61.188	Eptatretus_burgeri
ENSHGLG00100007281	-	100	69.109	ENSEASG00005002057	SRP54	100	69.109	Equus_asinus_asinus
ENSHGLG00100007281	-	99	68.537	ENSECAG00000018042	SRP54	98	68.537	Equus_caballus
ENSHGLG00100007281	-	92	75.877	ENSEEUG00000001511	SRP54	86	75.877	Erinaceus_europaeus
ENSHGLG00100007281	-	100	65.743	ENSELUG00000003395	srp54	100	65.743	Esox_lucius
ENSHGLG00100007281	-	100	68.911	ENSFCAG00000032033	SRP54	100	68.911	Felis_catus
ENSHGLG00100007281	-	100	68.119	ENSFALG00000005995	SRP54	100	68.119	Ficedula_albicollis
ENSHGLG00100007281	-	100	69.109	ENSFDAG00000016767	SRP54	100	69.109	Fukomys_damarensis
ENSHGLG00100007281	-	100	66.535	ENSFHEG00000004263	srp54	100	66.535	Fundulus_heteroclitus
ENSHGLG00100007281	-	94	62.630	ENSGMOG00000011391	srp54	100	62.630	Gadus_morhua
ENSHGLG00100007281	-	100	68.119	ENSGALG00000023135	SRP54	100	68.119	Gallus_gallus
ENSHGLG00100007281	-	100	66.733	ENSGAFG00000011586	srp54	100	66.733	Gambusia_affinis
ENSHGLG00100007281	-	100	66.733	ENSGACG00000004181	srp54	100	66.733	Gasterosteus_aculeatus
ENSHGLG00100007281	-	100	68.317	ENSGAGG00000014766	SRP54	100	68.317	Gopherus_agassizii
ENSHGLG00100007281	-	100	69.109	ENSGGOG00000002926	SRP54	100	69.109	Gorilla_gorilla
ENSHGLG00100007281	-	100	66.931	ENSHBUG00000005678	srp54	100	66.931	Haplochromis_burtoni
ENSHGLG00100007281	-	100	69.109	ENSHGLG00000002850	SRP54	100	69.109	Heterocephalus_glaber_female
ENSHGLG00100007281	-	100	65.545	ENSHCOG00000021127	srp54	100	65.545	Hippocampus_comes
ENSHGLG00100007281	-	100	66.535	ENSIPUG00000001420	srp54	100	66.535	Ictalurus_punctatus
ENSHGLG00100007281	-	100	69.109	ENSSTOG00000016023	SRP54	100	69.109	Ictidomys_tridecemlineatus
ENSHGLG00100007281	-	100	66.667	ENSJJAG00000013417	-	100	66.667	Jaculus_jaculus
ENSHGLG00100007281	-	88	58.696	ENSJJAG00000016404	-	100	58.696	Jaculus_jaculus
ENSHGLG00100007281	-	100	66.337	ENSKMAG00000007707	srp54	100	66.337	Kryptolebias_marmoratus
ENSHGLG00100007281	-	100	66.733	ENSLBEG00000021122	srp54	100	66.733	Labrus_bergylta
ENSHGLG00100007281	-	100	66.733	ENSLBEG00000018690	srp54	100	66.733	Labrus_bergylta
ENSHGLG00100007281	-	100	66.733	ENSLACG00000017890	SRP54	100	66.733	Latimeria_chalumnae
ENSHGLG00100007281	-	100	67.525	ENSLOCG00000009440	srp54	100	67.525	Lepisosteus_oculatus
ENSHGLG00100007281	-	100	69.109	ENSLAFG00000012007	SRP54	100	69.109	Loxodonta_africana
ENSHGLG00100007281	-	100	69.109	ENSMFAG00000044371	SRP54	100	69.109	Macaca_fascicularis
ENSHGLG00100007281	-	100	69.109	ENSMMUG00000015073	FAM177A1	100	69.109	Macaca_mulatta
ENSHGLG00100007281	-	100	69.109	ENSMNEG00000006947	SRP54	100	69.109	Macaca_nemestrina
ENSHGLG00100007281	-	100	69.109	ENSMLEG00000042251	SRP54	100	69.109	Mandrillus_leucophaeus
ENSHGLG00100007281	-	100	66.931	ENSMAMG00000004803	srp54	100	66.931	Mastacembelus_armatus
ENSHGLG00100007281	-	100	66.931	ENSMZEG00005027528	srp54	100	66.931	Maylandia_zebra
ENSHGLG00100007281	-	100	65.089	ENSMGAG00000012481	SRP54	100	65.089	Meleagris_gallopavo
ENSHGLG00100007281	-	100	69.109	ENSMAUG00000014447	-	100	69.109	Mesocricetus_auratus
ENSHGLG00100007281	-	100	69.109	ENSMICG00000010270	SRP54	100	69.109	Microcebus_murinus
ENSHGLG00100007281	-	88	70.068	ENSMOCG00000000948	-	100	70.068	Microtus_ochrogaster
ENSHGLG00100007281	-	88	64.509	ENSMMOG00000020303	srp54	98	64.509	Mola_mola
ENSHGLG00100007281	-	100	68.911	ENSMODG00000023150	-	100	68.911	Monodelphis_domestica
ENSHGLG00100007281	-	100	68.911	ENSMODG00000012925	-	100	68.911	Monodelphis_domestica
ENSHGLG00100007281	-	87	64.414	ENSMALG00000009163	srp54	98	64.414	Monopterus_albus
ENSHGLG00100007281	-	100	69.109	MGP_CAROLIEiJ_G0017754	-	100	69.109	Mus_caroli
ENSHGLG00100007281	-	100	69.109	ENSMUSG00000073079	Srp54a	100	71.171	Mus_musculus
ENSHGLG00100007281	-	100	68.713	ENSMUSG00000079108	Srp54c	100	68.713	Mus_musculus
ENSHGLG00100007281	-	100	69.109	ENSMUSG00000112449	Srp54b	100	69.109	Mus_musculus
ENSHGLG00100007281	-	100	69.109	MGP_PahariEiJ_G0029510	-	100	69.109	Mus_pahari
ENSHGLG00100007281	-	100	69.109	ENSMPUG00000016302	SRP54	100	69.109	Mustela_putorius_furo
ENSHGLG00100007281	-	100	68.713	ENSMLUG00000008958	SRP54	100	68.713	Myotis_lucifugus
ENSHGLG00100007281	-	100	66.527	ENSNGAG00000019806	-	100	66.527	Nannospalax_galili
ENSHGLG00100007281	-	88	67.800	ENSNBRG00000006000	srp54	100	67.800	Neolamprologus_brichardi
ENSHGLG00100007281	-	100	69.109	ENSNLEG00000003496	SRP54	100	69.109	Nomascus_leucogenys
ENSHGLG00100007281	-	65	81.633	ENSMEUG00000000138	-	74	81.633	Notamacropus_eugenii
ENSHGLG00100007281	-	64	86.885	ENSOPRG00000014502	-	60	86.885	Ochotona_princeps
ENSHGLG00100007281	-	100	69.109	ENSODEG00000004865	SRP54	100	69.109	Octodon_degus
ENSHGLG00100007281	-	100	66.931	ENSONIG00000011768	srp54	100	66.931	Oreochromis_niloticus
ENSHGLG00100007281	-	100	69.109	ENSOANG00000014051	SRP54	100	69.109	Ornithorhynchus_anatinus
ENSHGLG00100007281	-	100	68.911	ENSOCUG00000007838	SRP54	100	68.911	Oryctolagus_cuniculus
ENSHGLG00100007281	-	100	66.931	ENSORLG00000010027	srp54	100	66.931	Oryzias_latipes
ENSHGLG00100007281	-	100	66.931	ENSORLG00020001878	srp54	100	66.931	Oryzias_latipes_hni
ENSHGLG00100007281	-	100	66.931	ENSORLG00015021866	srp54	100	66.931	Oryzias_latipes_hsok
ENSHGLG00100007281	-	100	66.733	ENSOMEG00000020952	srp54	100	66.733	Oryzias_melastigma
ENSHGLG00100007281	-	100	69.109	ENSOGAG00000012188	SRP54	100	69.109	Otolemur_garnettii
ENSHGLG00100007281	-	100	69.109	ENSOARG00000007160	SRP54	100	69.109	Ovis_aries
ENSHGLG00100007281	-	100	69.109	ENSPPAG00000017434	SRP54	100	69.109	Pan_paniscus
ENSHGLG00100007281	-	100	69.600	ENSPPRG00000014047	SRP54	100	69.600	Panthera_pardus
ENSHGLG00100007281	-	100	68.911	ENSPTIG00000000744	SRP54	96	68.911	Panthera_tigris_altaica
ENSHGLG00100007281	-	100	69.109	ENSPTRG00000006259	FAM177A1	100	69.109	Pan_troglodytes
ENSHGLG00100007281	-	100	69.109	ENSPANG00000023853	SRP54	100	69.109	Papio_anubis
ENSHGLG00100007281	-	100	66.535	ENSPKIG00000001953	srp54	100	66.535	Paramormyrops_kingsleyae
ENSHGLG00100007281	-	100	68.317	ENSPSIG00000006476	SRP54	100	68.317	Pelodiscus_sinensis
ENSHGLG00100007281	-	89	63.797	ENSPMGG00000004127	srp54	98	63.797	Periophthalmus_magnuspinnatus
ENSHGLG00100007281	-	100	61.066	ENSPEMG00000019634	-	100	61.066	Peromyscus_maniculatus_bairdii
ENSHGLG00100007281	-	100	60.792	ENSPMAG00000006078	-	100	60.792	Petromyzon_marinus
ENSHGLG00100007281	-	100	68.911	ENSPCIG00000016175	SRP54	100	68.911	Phascolarctos_cinereus
ENSHGLG00100007281	-	100	66.733	ENSPFOG00000008870	srp54	100	66.733	Poecilia_formosa
ENSHGLG00100007281	-	100	66.733	ENSPLAG00000009889	srp54	100	66.733	Poecilia_latipinna
ENSHGLG00100007281	-	100	66.733	ENSPMEG00000008601	srp54	100	66.733	Poecilia_mexicana
ENSHGLG00100007281	-	100	66.733	ENSPREG00000004505	srp54	100	66.733	Poecilia_reticulata
ENSHGLG00100007281	-	100	66.139	ENSPPYG00000005739	SRP54	100	66.139	Pongo_abelii
ENSHGLG00100007281	-	100	66.139	ENSPCAG00000006268	SRP54	100	66.139	Procavia_capensis
ENSHGLG00100007281	-	100	67.787	ENSPCOG00000022473	SRP54	100	67.787	Propithecus_coquereli
ENSHGLG00100007281	-	61	70.526	ENSPVAG00000010056	SRP54	82	70.526	Pteropus_vampyrus
ENSHGLG00100007281	-	100	66.931	ENSPNYG00000009717	srp54	100	66.931	Pundamilia_nyererei
ENSHGLG00100007281	-	100	66.733	ENSPNAG00000008544	srp54	100	66.733	Pygocentrus_nattereri
ENSHGLG00100007281	-	100	68.911	ENSRNOG00000032776	Srp54a	100	68.911	Rattus_norvegicus
ENSHGLG00100007281	-	100	69.109	ENSRROG00000041292	SRP54	100	69.109	Rhinopithecus_roxellana
ENSHGLG00100007281	-	98	34.940	YPR088C	SRP54	93	35.156	Saccharomyces_cerevisiae
ENSHGLG00100007281	-	93	68.211	ENSSBOG00000035145	SRP54	100	68.211	Saimiri_boliviensis_boliviensis
ENSHGLG00100007281	-	67	69.096	ENSSHAG00000000671	SRP54	100	69.096	Sarcophilus_harrisii
ENSHGLG00100007281	-	100	66.931	ENSSFOG00015013920	srp54	100	66.931	Scleropages_formosus
ENSHGLG00100007281	-	100	62.804	ENSSMAG00000002441	srp54	100	62.804	Scophthalmus_maximus
ENSHGLG00100007281	-	100	66.733	ENSSDUG00000018586	srp54	100	66.733	Seriola_dumerili
ENSHGLG00100007281	-	100	66.535	ENSSLDG00000010476	srp54	100	66.535	Seriola_lalandi_dorsalis
ENSHGLG00100007281	-	100	69.109	ENSSARG00000002744	SRP54	100	69.109	Sorex_araneus
ENSHGLG00100007281	-	100	68.317	ENSSPUG00000013101	SRP54	100	68.317	Sphenodon_punctatus
ENSHGLG00100007281	-	100	66.733	ENSSPAG00000002354	srp54	100	66.733	Stegastes_partitus
ENSHGLG00100007281	-	100	69.109	ENSSSCG00000001955	SRP54	100	69.109	Sus_scrofa
ENSHGLG00100007281	-	93	66.105	ENSTGUG00000011945	-	95	66.105	Taeniopygia_guttata
ENSHGLG00100007281	-	100	66.337	ENSTRUG00000007057	srp54	100	66.337	Takifugu_rubripes
ENSHGLG00100007281	-	100	65.941	ENSTNIG00000002589	srp54	100	65.941	Tetraodon_nigroviridis
ENSHGLG00100007281	-	90	62.780	ENSTBEG00000011409	SRP54	99	62.780	Tupaia_belangeri
ENSHGLG00100007281	-	89	74.170	ENSTTRG00000000928	SRP54	86	74.170	Tursiops_truncatus
ENSHGLG00100007281	-	51	65.399	ENSUAMG00000012385	SRP54	100	65.399	Ursus_americanus
ENSHGLG00100007281	-	100	69.109	ENSUMAG00000011234	SRP54	100	69.109	Ursus_maritimus
ENSHGLG00100007281	-	93	66.667	ENSVPAG00000005668	SRP54	100	66.667	Vicugna_pacos
ENSHGLG00100007281	-	100	69.109	ENSVVUG00000019962	SRP54	100	69.109	Vulpes_vulpes
ENSHGLG00100007281	-	100	60.000	ENSXETG00000012290	srp54	100	60.000	Xenopus_tropicalis
ENSHGLG00100007281	-	87	64.414	ENSXCOG00000004658	srp54	96	64.414	Xiphophorus_couchianus
ENSHGLG00100007281	-	100	66.733	ENSXMAG00000018315	srp54	100	66.733	Xiphophorus_maculatus