EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100007464 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 18620 bases
Position: chrJH171263.1:233611-252230
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100010056	zf-C2H2	PF00096.26	1.4e-18	1	2
ENSHGLP00100010056	zf-C2H2	PF00096.26	1.4e-18	2	2
ENSHGLP00100010056	zf-met	PF12874.7	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100010175	PRDM4-201	2415	-	ENSHGLP00100010056	804 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100007464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100007464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100007464	PRDM4	100	92.547	ENSG00000110851	PRDM4	95	98.592	Homo_sapiens
ENSHGLG00100007464	PRDM4	100	92.556	ENSAMEG00000016174	PRDM4	99	92.432	Ailuropoda_melanoleuca
ENSHGLG00100007464	PRDM4	100	83.955	ENSAPLG00000009846	PRDM4	99	83.955	Anas_platyrhynchos
ENSHGLG00100007464	PRDM4	100	92.422	ENSANAG00000024800	PRDM4	99	92.671	Aotus_nancymaae
ENSHGLG00100007464	PRDM4	100	92.795	ENSBTAG00000012999	PRDM4	99	93.168	Bos_taurus
ENSHGLG00100007464	PRDM4	100	91.925	ENSCJAG00000015261	PRDM4	99	92.174	Callithrix_jacchus
ENSHGLG00100007464	PRDM4	100	92.547	ENSCAFG00000001788	PRDM4	99	92.919	Canis_familiaris
ENSHGLG00100007464	PRDM4	100	92.547	ENSCAFG00020004916	PRDM4	99	92.919	Canis_lupus_dingo
ENSHGLG00100007464	PRDM4	100	92.174	ENSCHIG00000019409	PRDM4	99	92.547	Capra_hircus
ENSHGLG00100007464	PRDM4	100	92.298	ENSTSYG00000009248	PRDM4	99	92.671	Carlito_syrichta
ENSHGLG00100007464	PRDM4	100	89.839	ENSCAPG00000013937	PRDM4	99	89.839	Cavia_aperea
ENSHGLG00100007464	PRDM4	100	89.299	ENSCPOG00000022385	PRDM4	100	89.299	Cavia_porcellus
ENSHGLG00100007464	PRDM4	100	92.547	ENSCCAG00000036033	PRDM4	99	92.795	Cebus_capucinus
ENSHGLG00100007464	PRDM4	100	92.174	ENSCATG00000044797	PRDM4	99	92.422	Cercocebus_atys
ENSHGLG00100007464	PRDM4	100	92.298	ENSCLAG00000007545	PRDM4	100	92.795	Chinchilla_lanigera
ENSHGLG00100007464	PRDM4	100	92.422	ENSCSAG00000002896	PRDM4	99	92.671	Chlorocebus_sabaeus
ENSHGLG00100007464	PRDM4	60	97.170	ENSCHOG00000001744	PRDM4	75	97.170	Choloepus_hoffmanni
ENSHGLG00100007464	PRDM4	100	85.448	ENSCPBG00000023187	PRDM4	100	85.448	Chrysemys_picta_bellii
ENSHGLG00100007464	PRDM4	100	92.547	ENSCANG00000021804	PRDM4	99	92.795	Colobus_angolensis_palliatus
ENSHGLG00100007464	PRDM4	100	90.672	ENSCGRG00001015102	-	100	90.672	Cricetulus_griseus_chok1gshd
ENSHGLG00100007464	PRDM4	96	90.710	ENSCGRG00000004044	-	100	90.710	Cricetulus_griseus_crigri
ENSHGLG00100007464	PRDM4	100	91.801	ENSDNOG00000032478	PRDM4	99	93.875	Dasypus_novemcinctus
ENSHGLG00100007464	PRDM4	91	91.558	ENSDORG00000015081	-	100	91.558	Dipodomys_ordii
ENSHGLG00100007464	PRDM4	94	45.341	ENSEBUG00000003775	prdm4	99	45.616	Eptatretus_burgeri
ENSHGLG00100007464	PRDM4	100	93.168	ENSECAG00000015423	PRDM4	99	93.540	Equus_caballus
ENSHGLG00100007464	PRDM4	94	89.578	ENSEEUG00000006569	PRDM4	99	89.578	Erinaceus_europaeus
ENSHGLG00100007464	PRDM4	99	59.085	ENSELUG00000015265	prdm4	99	59.446	Esox_lucius
ENSHGLG00100007464	PRDM4	100	92.547	ENSFCAG00000022478	PRDM4	99	92.919	Felis_catus
ENSHGLG00100007464	PRDM4	100	84.577	ENSFALG00000013342	PRDM4	100	84.577	Ficedula_albicollis
ENSHGLG00100007464	PRDM4	100	84.119	ENSGALG00000012619	PRDM4	99	84.119	Gallus_gallus
ENSHGLG00100007464	PRDM4	100	85.199	ENSGAGG00000002763	PRDM4	95	85.199	Gopherus_agassizii
ENSHGLG00100007464	PRDM4	100	92.671	ENSGGOG00000001244	PRDM4	99	92.919	Gorilla_gorilla
ENSHGLG00100007464	PRDM4	100	98.756	ENSHGLG00000004590	PRDM4	98	98.756	Heterocephalus_glaber_female
ENSHGLG00100007464	PRDM4	99	57.920	ENSIPUG00000024162	prdm4	99	57.920	Ictalurus_punctatus
ENSHGLG00100007464	PRDM4	100	92.050	ENSSTOG00000016168	PRDM4	99	92.174	Ictidomys_tridecemlineatus
ENSHGLG00100007464	PRDM4	81	93.496	ENSJJAG00000022448	-	95	93.496	Jaculus_jaculus
ENSHGLG00100007464	PRDM4	100	70.343	ENSLACG00000007452	PRDM4	99	70.588	Latimeria_chalumnae
ENSHGLG00100007464	PRDM4	78	42.480	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSHGLG00100007464	PRDM4	98	93.536	ENSLAFG00000001483	PRDM4	100	93.916	Loxodonta_africana
ENSHGLG00100007464	PRDM4	100	92.547	ENSMFAG00000041862	PRDM4	99	92.795	Macaca_fascicularis
ENSHGLG00100007464	PRDM4	100	92.547	ENSMMUG00000015550	PRDM4	99	92.795	Macaca_mulatta
ENSHGLG00100007464	PRDM4	100	92.547	ENSMNEG00000032319	PRDM4	99	92.795	Macaca_nemestrina
ENSHGLG00100007464	PRDM4	100	92.422	ENSMLEG00000039607	PRDM4	99	92.671	Mandrillus_leucophaeus
ENSHGLG00100007464	PRDM4	100	76.580	ENSMGAG00000012815	PRDM4	100	76.580	Meleagris_gallopavo
ENSHGLG00100007464	PRDM4	100	91.429	ENSMICG00000007807	PRDM4	99	91.801	Microcebus_murinus
ENSHGLG00100007464	PRDM4	100	90.796	ENSMOCG00000000753	Prdm4	99	90.796	Microtus_ochrogaster
ENSHGLG00100007464	PRDM4	100	91.045	ENSMUSG00000035529	Prdm4	100	91.045	Mus_musculus
ENSHGLG00100007464	PRDM4	100	90.311	MGP_PahariEiJ_G0031398	Prdm4	100	90.435	Mus_pahari
ENSHGLG00100007464	PRDM4	100	90.807	MGP_SPRETEiJ_G0016505	Prdm4	100	90.932	Mus_spretus
ENSHGLG00100007464	PRDM4	100	86.774	ENSMPUG00000012238	PRDM4	99	86.156	Mustela_putorius_furo
ENSHGLG00100007464	PRDM4	100	92.174	ENSMLUG00000000767	PRDM4	99	92.547	Myotis_lucifugus
ENSHGLG00100007464	PRDM4	100	90.932	ENSNGAG00000018627	Prdm4	100	91.304	Nannospalax_galili
ENSHGLG00100007464	PRDM4	100	92.671	ENSNLEG00000006748	PRDM4	99	92.919	Nomascus_leucogenys
ENSHGLG00100007464	PRDM4	90	86.851	ENSMEUG00000004495	PRDM4	89	86.851	Notamacropus_eugenii
ENSHGLG00100007464	PRDM4	88	94.340	ENSOPRG00000010192	PRDM4	89	94.340	Ochotona_princeps
ENSHGLG00100007464	PRDM4	100	89.801	ENSODEG00000014750	PRDM4	99	90.174	Octodon_degus
ENSHGLG00100007464	PRDM4	100	87.081	ENSOANG00000005526	PRDM4	99	87.081	Ornithorhynchus_anatinus
ENSHGLG00100007464	PRDM4	94	95.332	ENSOCUG00000012859	PRDM4	96	95.332	Oryctolagus_cuniculus
ENSHGLG00100007464	PRDM4	100	92.795	ENSOGAG00000011945	PRDM4	100	93.168	Otolemur_garnettii
ENSHGLG00100007464	PRDM4	100	91.801	ENSOARG00000017955	PRDM4	99	92.174	Ovis_aries
ENSHGLG00100007464	PRDM4	100	92.547	ENSPPAG00000038438	PRDM4	99	92.795	Pan_paniscus
ENSHGLG00100007464	PRDM4	100	92.547	ENSPPRG00000004144	PRDM4	99	92.919	Panthera_pardus
ENSHGLG00100007464	PRDM4	100	92.547	ENSPTIG00000005847	PRDM4	99	92.919	Panthera_tigris_altaica
ENSHGLG00100007464	PRDM4	100	92.547	ENSPTRG00000005400	PRDM4	99	92.795	Pan_troglodytes
ENSHGLG00100007464	PRDM4	100	92.547	ENSPANG00000022084	PRDM4	99	92.795	Papio_anubis
ENSHGLG00100007464	PRDM4	99	59.011	ENSPKIG00000000875	prdm4	99	59.246	Paramormyrops_kingsleyae
ENSHGLG00100007464	PRDM4	91	79.227	ENSPSIG00000012066	PRDM4	100	79.227	Pelodiscus_sinensis
ENSHGLG00100007464	PRDM4	100	91.056	ENSPEMG00000014598	Prdm4	100	91.180	Peromyscus_maniculatus_bairdii
ENSHGLG00100007464	PRDM4	100	86.634	ENSPCIG00000009471	PRDM4	99	86.634	Phascolarctos_cinereus
ENSHGLG00100007464	PRDM4	100	92.422	ENSPPYG00000004913	PRDM4	99	92.671	Pongo_abelii
ENSHGLG00100007464	PRDM4	83	93.182	ENSPCAG00000009987	PRDM4	83	93.182	Procavia_capensis
ENSHGLG00100007464	PRDM4	100	91.429	ENSPCOG00000021060	PRDM4	99	91.801	Propithecus_coquereli
ENSHGLG00100007464	PRDM4	100	91.935	ENSPVAG00000001596	PRDM4	99	92.308	Pteropus_vampyrus
ENSHGLG00100007464	PRDM4	100	90.943	ENSRNOG00000004962	Prdm4	100	91.067	Rattus_norvegicus
ENSHGLG00100007464	PRDM4	100	92.547	ENSRBIG00000035488	PRDM4	99	92.795	Rhinopithecus_bieti
ENSHGLG00100007464	PRDM4	100	92.671	ENSRROG00000012779	PRDM4	99	92.919	Rhinopithecus_roxellana
ENSHGLG00100007464	PRDM4	100	92.422	ENSSBOG00000000403	PRDM4	99	92.671	Saimiri_boliviensis_boliviensis
ENSHGLG00100007464	PRDM4	99	62.714	ENSSFOG00015023358	prdm4	98	62.836	Scleropages_formosus
ENSHGLG00100007464	PRDM4	100	93.043	ENSSSCG00000000160	PRDM4	99	93.168	Sus_scrofa
ENSHGLG00100007464	PRDM4	100	84.701	ENSTGUG00000010962	-	99	84.701	Taeniopygia_guttata
ENSHGLG00100007464	PRDM4	74	86.869	ENSTBEG00000001732	PRDM4	84	86.869	Tupaia_belangeri
ENSHGLG00100007464	PRDM4	100	92.795	ENSTTRG00000011056	PRDM4	99	93.168	Tursiops_truncatus
ENSHGLG00100007464	PRDM4	100	92.422	ENSUAMG00000022796	PRDM4	99	92.795	Ursus_americanus
ENSHGLG00100007464	PRDM4	100	92.422	ENSUMAG00000017231	PRDM4	99	92.795	Ursus_maritimus
ENSHGLG00100007464	PRDM4	100	92.547	ENSVPAG00000002215	PRDM4	100	92.671	Vicugna_pacos
ENSHGLG00100007464	PRDM4	100	92.547	ENSVVUG00000023397	PRDM4	99	92.919	Vulpes_vulpes