EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100008108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 103762 bases
Position: chrJH173292.1:1601854-1705615
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100010915	ResIII	PF04851.15	6.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100011041	-	5933	-	ENSHGLP00100010915	928 (aa)	-	UPI00034FB2DD

Gene Model

Click here to download ENSHGLG00100008108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100008108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100008108	-	55	30.651	ENSHGLG00100007155	CHD1L	51	30.651
ENSHGLG00100008108	-	70	43.570	ENSHGLG00100016987	RAD54L	82	43.570
ENSHGLG00100008108	-	60	30.870	ENSHGLG00100000544	-	84	30.807
ENSHGLG00100008108	-	61	30.473	ENSHGLG00100018421	-	51	30.473
ENSHGLG00100008108	-	60	31.217	ENSHGLG00100001102	SMARCA1	56	34.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100008108	-	99	83.931	ENSG00000197275	RAD54B	99	83.931	Homo_sapiens
ENSHGLG00100008108	-	79	86.413	ENSG00000265817	FSBP	99	86.413	Homo_sapiens
ENSHGLG00100008108	-	99	83.117	ENSAMEG00000005834	-	100	83.117	Ailuropoda_melanoleuca
ENSHGLG00100008108	-	99	53.548	ENSACIG00000013005	rad54b	99	53.548	Amphilophus_citrinellus
ENSHGLG00100008108	-	99	53.556	ENSAOCG00000008523	rad54b	99	53.556	Amphiprion_ocellaris
ENSHGLG00100008108	-	99	53.297	ENSAPEG00000001673	rad54b	99	53.081	Amphiprion_percula
ENSHGLG00100008108	-	99	53.175	ENSATEG00000001527	rad54b	99	53.175	Anabas_testudineus
ENSHGLG00100008108	-	99	67.922	ENSAPLG00000014366	-	99	67.922	Anas_platyrhynchos
ENSHGLG00100008108	-	87	68.311	ENSACAG00000003671	-	99	68.311	Anolis_carolinensis
ENSHGLG00100008108	-	71	84.977	ENSANAG00000019528	-	99	84.977	Aotus_nancymaae
ENSHGLG00100008108	-	99	53.772	ENSACLG00000007826	rad54b	99	53.664	Astatotilapia_calliptera
ENSHGLG00100008108	-	85	55.875	ENSAMXG00000039985	rad54b	94	55.693	Astyanax_mexicanus
ENSHGLG00100008108	-	99	79.523	ENSBTAG00000000632	RAD54B	100	79.523	Bos_taurus
ENSHGLG00100008108	-	78	34.450	WBGene00013792	Y116A8C.13	85	34.375	Caenorhabditis_elegans
ENSHGLG00100008108	-	99	82.193	ENSCJAG00000000080	-	99	84.647	Callithrix_jacchus
ENSHGLG00100008108	-	99	80.952	ENSCAFG00000009179	RAD54B	99	80.952	Canis_familiaris
ENSHGLG00100008108	-	99	80.736	ENSCAFG00020012084	-	99	80.736	Canis_lupus_dingo
ENSHGLG00100008108	-	99	79.415	ENSCHIG00000008230	-	100	79.415	Capra_hircus
ENSHGLG00100008108	-	99	82.882	ENSTSYG00000013234	-	100	82.882	Carlito_syrichta
ENSHGLG00100008108	-	99	88.069	ENSCPOG00000011643	-	99	88.069	Cavia_porcellus
ENSHGLG00100008108	-	99	82.085	ENSCCAG00000011754	-	99	84.511	Cebus_capucinus
ENSHGLG00100008108	-	99	83.062	ENSCATG00000030661	-	99	85.734	Cercocebus_atys
ENSHGLG00100008108	-	99	88.925	ENSCLAG00000010476	-	99	88.925	Chinchilla_lanigera
ENSHGLG00100008108	-	99	82.845	ENSCSAG00000012712	-	99	82.845	Chlorocebus_sabaeus
ENSHGLG00100008108	-	99	67.556	ENSCPBG00000003204	-	99	67.865	Chrysemys_picta_bellii
ENSHGLG00100008108	-	99	82.845	ENSCANG00000017939	-	99	85.462	Colobus_angolensis_palliatus
ENSHGLG00100008108	-	99	77.356	ENSCGRG00001020184	Rad54b	100	77.356	Cricetulus_griseus_chok1gshd
ENSHGLG00100008108	-	99	75.948	ENSCGRG00000016752	Rad54b	100	75.948	Cricetulus_griseus_crigri
ENSHGLG00100008108	-	88	55.836	ENSCSEG00000001601	rad54b	95	55.836	Cynoglossus_semilaevis
ENSHGLG00100008108	-	99	55.080	ENSCVAG00000009200	rad54b	99	55.080	Cyprinodon_variegatus
ENSHGLG00100008108	-	99	51.357	ENSDARG00000092134	rad54b	100	58.133	Danio_rerio
ENSHGLG00100008108	-	99	80.282	ENSDNOG00000015535	-	99	80.282	Dasypus_novemcinctus
ENSHGLG00100008108	-	99	81.236	ENSDORG00000002492	Rad54b	100	81.236	Dipodomys_ordii
ENSHGLG00100008108	-	86	78.277	ENSETEG00000010605	-	100	78.277	Echinops_telfairi
ENSHGLG00100008108	-	99	46.285	ENSEBUG00000009104	rad54b	98	46.497	Eptatretus_burgeri
ENSHGLG00100008108	-	96	81.229	ENSEASG00005004021	-	100	81.229	Equus_asinus_asinus
ENSHGLG00100008108	-	100	81.358	ENSECAG00000021949	-	99	81.425	Equus_caballus
ENSHGLG00100008108	-	83	83.851	ENSEEUG00000008056	-	83	83.851	Erinaceus_europaeus
ENSHGLG00100008108	-	85	58.052	ENSELUG00000009287	rad54b	99	52.587	Esox_lucius
ENSHGLG00100008108	-	99	82.035	ENSFCAG00000015513	-	100	84.824	Felis_catus
ENSHGLG00100008108	-	99	66.738	ENSFALG00000005467	-	99	66.738	Ficedula_albicollis
ENSHGLG00100008108	-	99	91.739	ENSFDAG00000020541	-	100	91.739	Fukomys_damarensis
ENSHGLG00100008108	-	97	52.329	ENSFHEG00000014382	rad54b	87	57.302	Fundulus_heteroclitus
ENSHGLG00100008108	-	86	55.324	ENSGMOG00000014774	rad54b	99	55.324	Gadus_morhua
ENSHGLG00100008108	-	99	66.882	ENSGALG00000043597	RAD54B	99	66.882	Gallus_gallus
ENSHGLG00100008108	-	98	54.672	ENSGAFG00000007901	rad54b	99	54.672	Gambusia_affinis
ENSHGLG00100008108	-	98	53.312	ENSGACG00000009128	rad54b	99	53.312	Gasterosteus_aculeatus
ENSHGLG00100008108	-	99	67.310	ENSGAGG00000018747	-	99	67.310	Gopherus_agassizii
ENSHGLG00100008108	-	99	83.424	ENSGGOG00000023516	-	100	83.424	Gorilla_gorilla
ENSHGLG00100008108	-	99	53.579	ENSHBUG00000016017	rad54b	99	53.579	Haplochromis_burtoni
ENSHGLG00100008108	-	100	98.922	ENSHGLG00000008263	RAD54B	100	98.922	Heterocephalus_glaber_female
ENSHGLG00100008108	-	98	51.872	ENSHCOG00000004764	rad54b	98	54.933	Hippocampus_comes
ENSHGLG00100008108	-	99	50.777	ENSIPUG00000018531	rad54b	99	50.777	Ictalurus_punctatus
ENSHGLG00100008108	-	99	82.096	ENSSTOG00000010791	-	99	82.096	Ictidomys_tridecemlineatus
ENSHGLG00100008108	-	99	78.742	ENSJJAG00000010314	Rad54b	100	78.742	Jaculus_jaculus
ENSHGLG00100008108	-	99	52.314	ENSKMAG00000004744	rad54b	99	52.314	Kryptolebias_marmoratus
ENSHGLG00100008108	-	77	72.308	ENSLACG00000000859	-	100	66.887	Latimeria_chalumnae
ENSHGLG00100008108	-	99	56.059	ENSLOCG00000010100	rad54b	94	61.491	Lepisosteus_oculatus
ENSHGLG00100008108	-	88	82.073	ENSLAFG00000015315	-	100	82.073	Loxodonta_africana
ENSHGLG00100008108	-	99	83.062	ENSMFAG00000031629	-	99	85.598	Macaca_fascicularis
ENSHGLG00100008108	-	99	83.062	ENSMMUG00000005659	-	99	83.062	Macaca_mulatta
ENSHGLG00100008108	-	99	82.935	ENSMNEG00000016408	-	99	82.935	Macaca_nemestrina
ENSHGLG00100008108	-	99	83.062	ENSMLEG00000006946	-	99	83.062	Mandrillus_leucophaeus
ENSHGLG00100008108	-	99	53.575	ENSMAMG00000012269	rad54b	99	53.575	Mastacembelus_armatus
ENSHGLG00100008108	-	99	53.579	ENSMZEG00005005281	rad54b	95	58.561	Maylandia_zebra
ENSHGLG00100008108	-	99	66.667	ENSMGAG00000012024	-	99	66.667	Meleagris_gallopavo
ENSHGLG00100008108	-	99	76.381	ENSMAUG00000013586	Rad54b	100	76.381	Mesocricetus_auratus
ENSHGLG00100008108	-	91	85.142	ENSMICG00000000754	-	96	85.142	Microcebus_murinus
ENSHGLG00100008108	-	99	75.515	ENSMOCG00000020035	Rad54b	99	75.623	Microtus_ochrogaster
ENSHGLG00100008108	-	99	52.941	ENSMMOG00000003394	rad54b	99	52.559	Mola_mola
ENSHGLG00100008108	-	88	74.755	ENSMODG00000007343	-	99	74.755	Monodelphis_domestica
ENSHGLG00100008108	-	71	58.079	ENSMALG00000001520	rad54b	99	58.079	Monopterus_albus
ENSHGLG00100008108	-	99	76.898	MGP_CAROLIEiJ_G0025810	Rad54b	100	76.898	Mus_caroli
ENSHGLG00100008108	-	99	76.573	ENSMUSG00000078773	Rad54b	100	76.573	Mus_musculus
ENSHGLG00100008108	-	99	77.007	MGP_PahariEiJ_G0023933	Rad54b	100	77.007	Mus_pahari
ENSHGLG00100008108	-	99	77.440	MGP_SPRETEiJ_G0026758	Rad54b	100	77.440	Mus_spretus
ENSHGLG00100008108	-	88	83.090	ENSMPUG00000008878	-	100	83.090	Mustela_putorius_furo
ENSHGLG00100008108	-	99	79.826	ENSMLUG00000008953	-	99	79.826	Myotis_lucifugus
ENSHGLG00100008108	-	99	79.957	ENSNGAG00000017537	Rad54b	100	79.957	Nannospalax_galili
ENSHGLG00100008108	-	99	53.664	ENSNBRG00000013394	rad54b	99	53.664	Neolamprologus_brichardi
ENSHGLG00100008108	-	99	84.039	ENSNLEG00000003062	-	99	86.277	Nomascus_leucogenys
ENSHGLG00100008108	-	70	72.705	ENSMEUG00000012426	-	71	72.705	Notamacropus_eugenii
ENSHGLG00100008108	-	99	87.961	ENSODEG00000019564	-	100	87.961	Octodon_degus
ENSHGLG00100008108	-	88	81.829	ENSODEG00000002650	-	95	91.667	Octodon_degus
ENSHGLG00100008108	-	99	53.739	ENSONIG00000006067	rad54b	99	53.739	Oreochromis_niloticus
ENSHGLG00100008108	-	82	74.379	ENSOANG00000011348	-	100	74.379	Ornithorhynchus_anatinus
ENSHGLG00100008108	-	99	80.607	ENSOCUG00000016478	-	99	80.607	Oryctolagus_cuniculus
ENSHGLG00100008108	-	99	53.725	ENSORLG00000008918	rad54b	99	60.243	Oryzias_latipes
ENSHGLG00100008108	-	71	60.243	ENSORLG00020012171	rad54b	99	60.243	Oryzias_latipes_hni
ENSHGLG00100008108	-	99	53.508	ENSORLG00015018536	rad54b	99	53.508	Oryzias_latipes_hsok
ENSHGLG00100008108	-	84	58.935	ENSOMEG00000004345	rad54b	99	58.935	Oryzias_melastigma
ENSHGLG00100008108	-	99	81.976	ENSOGAG00000007854	-	99	81.976	Otolemur_garnettii
ENSHGLG00100008108	-	88	82.646	ENSOARG00000007691	-	100	82.646	Ovis_aries
ENSHGLG00100008108	-	99	82.302	ENSPPAG00000029572	-	99	82.302	Pan_paniscus
ENSHGLG00100008108	-	99	82.251	ENSPPRG00000007571	-	100	85.095	Panthera_pardus
ENSHGLG00100008108	-	80	85.095	ENSPTIG00000012670	-	100	85.095	Panthera_tigris_altaica
ENSHGLG00100008108	-	99	83.822	ENSPTRG00000020427	-	99	86.277	Pan_troglodytes
ENSHGLG00100008108	-	99	83.170	ENSPANG00000019566	-	99	83.170	Papio_anubis
ENSHGLG00100008108	-	98	56.438	ENSPKIG00000014974	rad54b	99	56.438	Paramormyrops_kingsleyae
ENSHGLG00100008108	-	99	66.523	ENSPSIG00000002383	-	98	71.779	Pelodiscus_sinensis
ENSHGLG00100008108	-	99	77.356	ENSPEMG00000012133	Rad54b	100	77.356	Peromyscus_maniculatus_bairdii
ENSHGLG00100008108	-	86	57.090	ENSPMAG00000002916	rad54b	99	57.090	Petromyzon_marinus
ENSHGLG00100008108	-	88	74.543	ENSPCIG00000020151	-	94	74.510	Phascolarctos_cinereus
ENSHGLG00100008108	-	98	54.355	ENSPFOG00000023411	rad54b	99	54.355	Poecilia_formosa
ENSHGLG00100008108	-	98	54.460	ENSPLAG00000010430	rad54b	99	54.460	Poecilia_latipinna
ENSHGLG00100008108	-	98	53.623	ENSPMEG00000016873	rad54b	99	53.623	Poecilia_mexicana
ENSHGLG00100008108	-	98	54.713	ENSPREG00000018443	rad54b	99	54.713	Poecilia_reticulata
ENSHGLG00100008108	-	99	83.279	ENSPPYG00000018750	-	99	83.279	Pongo_abelii
ENSHGLG00100008108	-	99	84.365	ENSPCOG00000026845	-	99	85.870	Propithecus_coquereli
ENSHGLG00100008108	-	87	84.309	ENSPVAG00000000261	-	92	84.309	Pteropus_vampyrus
ENSHGLG00100008108	-	86	57.869	ENSPNYG00000018303	rad54b	96	57.869	Pundamilia_nyererei
ENSHGLG00100008108	-	99	52.350	ENSPNAG00000000295	rad54b	99	52.350	Pygocentrus_nattereri
ENSHGLG00100008108	-	99	74.865	ENSRNOG00000039949	Rad54b	100	74.865	Rattus_norvegicus
ENSHGLG00100008108	-	99	82.302	ENSRBIG00000020419	-	99	82.302	Rhinopithecus_bieti
ENSHGLG00100008108	-	99	82.302	ENSRROG00000039897	-	99	82.302	Rhinopithecus_roxellana
ENSHGLG00100008108	-	78	36.921	YBR073W	RDH54	79	37.719	Saccharomyces_cerevisiae
ENSHGLG00100008108	-	99	82.302	ENSSBOG00000028501	-	99	82.302	Saimiri_boliviensis_boliviensis
ENSHGLG00100008108	-	99	70.964	ENSSHAG00000017038	-	99	70.964	Sarcophilus_harrisii
ENSHGLG00100008108	-	63	63.402	ENSSFOG00015008483	rad54b	88	63.402	Scleropages_formosus
ENSHGLG00100008108	-	98	52.242	ENSSMAG00000018659	rad54b	99	53.139	Scophthalmus_maximus
ENSHGLG00100008108	-	98	52.296	ENSSDUG00000001122	rad54b	98	52.237	Seriola_dumerili
ENSHGLG00100008108	-	98	52.599	ENSSLDG00000013787	rad54b	99	52.332	Seriola_lalandi_dorsalis
ENSHGLG00100008108	-	99	66.162	ENSSPUG00000016497	-	99	65.946	Sphenodon_punctatus
ENSHGLG00100008108	-	99	54.028	ENSSPAG00000012800	rad54b	99	54.028	Stegastes_partitus
ENSHGLG00100008108	-	99	79.348	ENSSSCG00000006101	-	99	83.313	Sus_scrofa
ENSHGLG00100008108	-	99	66.132	ENSTGUG00000011880	-	99	66.132	Taeniopygia_guttata
ENSHGLG00100008108	-	86	58.313	ENSTRUG00000010015	rad54b	99	53.187	Takifugu_rubripes
ENSHGLG00100008108	-	99	77.898	ENSTTRG00000006312	-	100	77.898	Tursiops_truncatus
ENSHGLG00100008108	-	99	83.009	ENSUMAG00000016401	-	100	83.009	Ursus_maritimus
ENSHGLG00100008108	-	99	79.676	ENSVPAG00000003157	-	100	79.676	Vicugna_pacos
ENSHGLG00100008108	-	99	54.072	ENSXETG00000025924	rad54b	99	57.862	Xenopus_tropicalis
ENSHGLG00100008108	-	98	54.399	ENSXMAG00000013141	rad54b	99	54.399	Xiphophorus_maculatus