EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100008533 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 4312 bases
Position: chrJH170305.1:49297-53608
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100011498	RRM_1	PF00076.22	2.9e-39	1	2
ENSHGLP00100011498	RRM_1	PF00076.22	2.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100011632	SF3B4-201	1266	-	ENSHGLP00100011498	421 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100008533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100008533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100008533	SF3B4	58	40.984	ENSHGLG00100020648	PABPC4L	97	40.984
ENSHGLG00100008533	SF3B4	70	39.844	ENSHGLG00100007448	-	54	39.844
ENSHGLG00100008533	SF3B4	55	35.979	ENSHGLG00100012151	PABPC1L	59	35.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100008533	SF3B4	100	98.349	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSHGLG00100008533	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	60	96.667	Acanthochromis_polyacanthus
ENSHGLG00100008533	SF3B4	100	98.585	ENSAMEG00000010073	SF3B4	100	98.585	Ailuropoda_melanoleuca
ENSHGLG00100008533	SF3B4	57	96.667	ENSAOCG00000019801	sf3b4	60	96.667	Amphiprion_ocellaris
ENSHGLG00100008533	SF3B4	57	96.667	ENSAPEG00000010365	sf3b4	60	96.667	Amphiprion_percula
ENSHGLG00100008533	SF3B4	57	96.250	ENSATEG00000012844	sf3b4	60	96.250	Anabas_testudineus
ENSHGLG00100008533	SF3B4	58	96.708	ENSACAG00000010019	SF3B4	90	85.526	Anolis_carolinensis
ENSHGLG00100008533	SF3B4	100	98.349	ENSANAG00000031025	SF3B4	100	98.349	Aotus_nancymaae
ENSHGLG00100008533	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	60	95.833	Astatotilapia_calliptera
ENSHGLG00100008533	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSHGLG00100008533	SF3B4	100	98.585	ENSBTAG00000012495	SF3B4	100	98.585	Bos_taurus
ENSHGLG00100008533	SF3B4	84	89.356	ENSBTAG00000012793	-	52	98.571	Bos_taurus
ENSHGLG00100008533	SF3B4	90	80.069	ENSCJAG00000042351	SF3B4	52	97.849	Callithrix_jacchus
ENSHGLG00100008533	SF3B4	100	98.349	ENSCAFG00000011617	SF3B4	100	98.349	Canis_familiaris
ENSHGLG00100008533	SF3B4	100	98.349	ENSCAFG00020019775	SF3B4	100	98.349	Canis_lupus_dingo
ENSHGLG00100008533	SF3B4	100	98.585	ENSCHIG00000025663	-	100	98.585	Capra_hircus
ENSHGLG00100008533	SF3B4	100	98.349	ENSTSYG00000009295	SF3B4	100	98.349	Carlito_syrichta
ENSHGLG00100008533	SF3B4	100	98.821	ENSCPOG00000008267	SF3B4	100	98.821	Cavia_porcellus
ENSHGLG00100008533	SF3B4	95	84.328	ENSCCAG00000019823	-	77	82.209	Cebus_capucinus
ENSHGLG00100008533	SF3B4	100	85.900	ENSCCAG00000021751	-	53	99.153	Cebus_capucinus
ENSHGLG00100008533	SF3B4	100	98.349	ENSCATG00000033114	SF3B4	100	98.349	Cercocebus_atys
ENSHGLG00100008533	SF3B4	100	98.821	ENSCLAG00000015851	SF3B4	100	98.821	Chinchilla_lanigera
ENSHGLG00100008533	SF3B4	100	98.349	ENSCSAG00000018129	SF3B4	100	98.349	Chlorocebus_sabaeus
ENSHGLG00100008533	SF3B4	58	97.119	ENSCPBG00000008041	SF3B4	91	85.827	Chrysemys_picta_bellii
ENSHGLG00100008533	SF3B4	51	90.698	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSHGLG00100008533	SF3B4	100	98.349	ENSCANG00000035579	SF3B4	100	98.349	Colobus_angolensis_palliatus
ENSHGLG00100008533	SF3B4	100	98.585	ENSCGRG00001003590	Sf3b4	100	98.585	Cricetulus_griseus_chok1gshd
ENSHGLG00100008533	SF3B4	100	98.585	ENSCGRG00000016914	Sf3b4	100	98.585	Cricetulus_griseus_crigri
ENSHGLG00100008533	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	60	96.250	Danio_rerio
ENSHGLG00100008533	SF3B4	97	79.903	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSHGLG00100008533	SF3B4	98	95.673	ENSDNOG00000048908	-	99	95.673	Dasypus_novemcinctus
ENSHGLG00100008533	SF3B4	100	98.585	ENSDORG00000016366	Sf3b4	100	98.585	Dipodomys_ordii
ENSHGLG00100008533	SF3B4	76	82.716	ENSETEG00000008963	SF3B4	56	90.254	Echinops_telfairi
ENSHGLG00100008533	SF3B4	100	98.585	ENSEASG00005001477	SF3B4	100	98.585	Equus_asinus_asinus
ENSHGLG00100008533	SF3B4	100	98.585	ENSECAG00000024737	SF3B4	100	98.585	Equus_caballus
ENSHGLG00100008533	SF3B4	57	97.083	ENSELUG00000012876	sf3b4	60	97.083	Esox_lucius
ENSHGLG00100008533	SF3B4	100	98.585	ENSFCAG00000010106	SF3B4	100	98.585	Felis_catus
ENSHGLG00100008533	SF3B4	100	98.821	ENSFDAG00000009286	SF3B4	100	98.821	Fukomys_damarensis
ENSHGLG00100008533	SF3B4	55	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSHGLG00100008533	SF3B4	58	96.708	ENSGALG00000013352	SF3B4	90	85.789	Gallus_gallus
ENSHGLG00100008533	SF3B4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSHGLG00100008533	SF3B4	50	100.000	ENSGACG00000003819	sf3b4	58	97.807	Gasterosteus_aculeatus
ENSHGLG00100008533	SF3B4	58	97.119	ENSGAGG00000025055	SF3B4	79	85.564	Gopherus_agassizii
ENSHGLG00100008533	SF3B4	100	72.406	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSHGLG00100008533	SF3B4	100	98.349	ENSGGOG00000004761	SF3B4	100	98.349	Gorilla_gorilla
ENSHGLG00100008533	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	60	95.833	Haplochromis_burtoni
ENSHGLG00100008533	SF3B4	100	98.821	ENSHGLG00000012360	SF3B4	100	98.821	Heterocephalus_glaber_female
ENSHGLG00100008533	SF3B4	51	99.531	ENSHCOG00000003014	sf3b4	57	96.491	Hippocampus_comes
ENSHGLG00100008533	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	77	80.063	Ictalurus_punctatus
ENSHGLG00100008533	SF3B4	100	98.585	ENSSTOG00000000684	-	100	98.585	Ictidomys_tridecemlineatus
ENSHGLG00100008533	SF3B4	62	96.429	ENSJJAG00000022500	Sf3b4	57	76.224	Jaculus_jaculus
ENSHGLG00100008533	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSHGLG00100008533	SF3B4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSHGLG00100008533	SF3B4	58	95.473	ENSLACG00000004436	SF3B4	67	95.473	Latimeria_chalumnae
ENSHGLG00100008533	SF3B4	58	95.885	ENSLOCG00000009048	sf3b4	75	81.646	Lepisosteus_oculatus
ENSHGLG00100008533	SF3B4	100	98.118	ENSLAFG00000008531	SF3B4	100	98.118	Loxodonta_africana
ENSHGLG00100008533	SF3B4	92	71.355	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSHGLG00100008533	SF3B4	100	98.349	ENSMFAG00000042395	SF3B4	100	98.349	Macaca_fascicularis
ENSHGLG00100008533	SF3B4	100	98.349	ENSMMUG00000007256	SF3B4	100	98.349	Macaca_mulatta
ENSHGLG00100008533	SF3B4	92	70.844	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSHGLG00100008533	SF3B4	100	98.349	ENSMNEG00000031839	SF3B4	100	98.349	Macaca_nemestrina
ENSHGLG00100008533	SF3B4	100	98.349	ENSMLEG00000038667	SF3B4	100	98.349	Mandrillus_leucophaeus
ENSHGLG00100008533	SF3B4	57	97.083	ENSMAMG00000014692	sf3b4	60	97.083	Mastacembelus_armatus
ENSHGLG00100008533	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	60	95.833	Maylandia_zebra
ENSHGLG00100008533	SF3B4	58	96.708	ENSMGAG00000000653	SF3B4	91	85.000	Meleagris_gallopavo
ENSHGLG00100008533	SF3B4	100	98.585	ENSMAUG00000015266	Sf3b4	100	98.585	Mesocricetus_auratus
ENSHGLG00100008533	SF3B4	100	98.585	ENSMICG00000044961	SF3B4	100	98.585	Microcebus_murinus
ENSHGLG00100008533	SF3B4	100	98.585	ENSMOCG00000013658	-	100	98.585	Microtus_ochrogaster
ENSHGLG00100008533	SF3B4	98	93.494	ENSMOCG00000014155	-	100	93.494	Microtus_ochrogaster
ENSHGLG00100008533	SF3B4	55	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSHGLG00100008533	SF3B4	100	97.877	ENSMODG00000018767	SF3B4	100	97.877	Monodelphis_domestica
ENSHGLG00100008533	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSHGLG00100008533	SF3B4	100	98.349	MGP_CAROLIEiJ_G0025365	Sf3b4	100	98.349	Mus_caroli
ENSHGLG00100008533	SF3B4	100	98.585	ENSMUSG00000068856	Sf3b4	100	98.585	Mus_musculus
ENSHGLG00100008533	SF3B4	100	98.585	MGP_PahariEiJ_G0026809	Sf3b4	100	98.585	Mus_pahari
ENSHGLG00100008533	SF3B4	100	98.585	MGP_SPRETEiJ_G0026309	Sf3b4	100	98.585	Mus_spretus
ENSHGLG00100008533	SF3B4	100	98.585	ENSMPUG00000005563	SF3B4	100	98.585	Mustela_putorius_furo
ENSHGLG00100008533	SF3B4	100	98.349	ENSMLUG00000010789	SF3B4	100	98.349	Myotis_lucifugus
ENSHGLG00100008533	SF3B4	100	98.349	ENSNGAG00000016337	Sf3b4	100	98.349	Nannospalax_galili
ENSHGLG00100008533	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	60	96.250	Neolamprologus_brichardi
ENSHGLG00100008533	SF3B4	100	75.236	ENSNLEG00000000537	-	60	90.678	Nomascus_leucogenys
ENSHGLG00100008533	SF3B4	100	68.692	ENSNLEG00000009693	-	100	68.692	Nomascus_leucogenys
ENSHGLG00100008533	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSHGLG00100008533	SF3B4	99	96.200	ENSOPRG00000010808	SF3B4	99	96.200	Ochotona_princeps
ENSHGLG00100008533	SF3B4	74	77.287	ENSODEG00000003597	-	58	83.544	Octodon_degus
ENSHGLG00100008533	SF3B4	88	71.314	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSHGLG00100008533	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSHGLG00100008533	SF3B4	99	56.744	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSHGLG00100008533	SF3B4	100	98.585	ENSOCUG00000004614	SF3B4	100	98.585	Oryctolagus_cuniculus
ENSHGLG00100008533	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSHGLG00100008533	SF3B4	55	96.983	ENSORLG00020000687	sf3b4	57	97.807	Oryzias_latipes_hni
ENSHGLG00100008533	SF3B4	55	96.983	ENSORLG00015010989	sf3b4	57	97.807	Oryzias_latipes_hsok
ENSHGLG00100008533	SF3B4	55	96.983	ENSOMEG00000013694	sf3b4	57	97.807	Oryzias_melastigma
ENSHGLG00100008533	SF3B4	100	98.585	ENSOGAG00000006265	SF3B4	100	98.585	Otolemur_garnettii
ENSHGLG00100008533	SF3B4	100	98.585	ENSOARG00000020718	-	100	98.585	Ovis_aries
ENSHGLG00100008533	SF3B4	86	77.747	ENSOARG00000007368	-	55	83.482	Ovis_aries
ENSHGLG00100008533	SF3B4	100	80.896	ENSPPAG00000030024	-	58	89.831	Pan_paniscus
ENSHGLG00100008533	SF3B4	100	98.349	ENSPPAG00000040904	SF3B4	100	98.349	Pan_paniscus
ENSHGLG00100008533	SF3B4	100	98.585	ENSPPRG00000007384	SF3B4	100	98.585	Panthera_pardus
ENSHGLG00100008533	SF3B4	100	98.113	ENSPTIG00000014530	SF3B4	100	98.113	Panthera_tigris_altaica
ENSHGLG00100008533	SF3B4	100	79.335	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSHGLG00100008533	SF3B4	100	98.349	ENSPTRG00000001243	SF3B4	100	98.349	Pan_troglodytes
ENSHGLG00100008533	SF3B4	100	98.349	ENSPANG00000005126	SF3B4	100	98.349	Papio_anubis
ENSHGLG00100008533	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSHGLG00100008533	SF3B4	100	98.585	ENSPEMG00000017568	Sf3b4	100	98.585	Peromyscus_maniculatus_bairdii
ENSHGLG00100008533	SF3B4	90	72.123	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSHGLG00100008533	SF3B4	100	97.877	ENSPCIG00000008765	SF3B4	100	97.877	Phascolarctos_cinereus
ENSHGLG00100008533	SF3B4	64	91.418	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSHGLG00100008533	SF3B4	64	91.418	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSHGLG00100008533	SF3B4	64	91.418	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSHGLG00100008533	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSHGLG00100008533	SF3B4	100	98.585	ENSPCOG00000015399	SF3B4	100	98.585	Propithecus_coquereli
ENSHGLG00100008533	SF3B4	100	98.585	ENSPVAG00000014171	SF3B4	100	98.585	Pteropus_vampyrus
ENSHGLG00100008533	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	60	95.833	Pundamilia_nyererei
ENSHGLG00100008533	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	61	96.667	Pygocentrus_nattereri
ENSHGLG00100008533	SF3B4	100	98.585	ENSRNOG00000021181	Sf3b4	100	98.585	Rattus_norvegicus
ENSHGLG00100008533	SF3B4	100	98.349	ENSRBIG00000043392	SF3B4	100	98.349	Rhinopithecus_bieti
ENSHGLG00100008533	SF3B4	91	69.923	ENSRROG00000028213	-	56	76.364	Rhinopithecus_roxellana
ENSHGLG00100008533	SF3B4	100	98.349	ENSRROG00000029366	SF3B4	100	98.349	Rhinopithecus_roxellana
ENSHGLG00100008533	SF3B4	100	98.113	ENSSBOG00000012310	-	100	98.113	Saimiri_boliviensis_boliviensis
ENSHGLG00100008533	SF3B4	100	95.283	ENSSHAG00000004043	SF3B4	100	97.375	Sarcophilus_harrisii
ENSHGLG00100008533	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSHGLG00100008533	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	60	96.667	Scophthalmus_maximus
ENSHGLG00100008533	SF3B4	57	97.083	ENSSDUG00000012064	sf3b4	60	97.083	Seriola_dumerili
ENSHGLG00100008533	SF3B4	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSHGLG00100008533	SF3B4	57	97.500	ENSSPAG00000019219	sf3b4	60	97.500	Stegastes_partitus
ENSHGLG00100008533	SF3B4	100	98.349	ENSSSCG00000006665	-	100	98.349	Sus_scrofa
ENSHGLG00100008533	SF3B4	85	64.345	ENSSSCG00000039440	-	58	83.871	Sus_scrofa
ENSHGLG00100008533	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSHGLG00100008533	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSHGLG00100008533	SF3B4	55	96.957	ENSTNIG00000009156	sf3b4	58	97.368	Tetraodon_nigroviridis
ENSHGLG00100008533	SF3B4	100	98.585	ENSTTRG00000005217	SF3B4	100	98.585	Tursiops_truncatus
ENSHGLG00100008533	SF3B4	100	98.585	ENSUAMG00000022468	SF3B4	100	98.585	Ursus_americanus
ENSHGLG00100008533	SF3B4	100	98.113	ENSUMAG00000003802	SF3B4	100	98.113	Ursus_maritimus
ENSHGLG00100008533	SF3B4	97	98.544	ENSVPAG00000008152	SF3B4	100	98.544	Vicugna_pacos
ENSHGLG00100008533	SF3B4	99	91.627	ENSVVUG00000007732	-	100	91.627	Vulpes_vulpes
ENSHGLG00100008533	SF3B4	51	97.674	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSHGLG00100008533	SF3B4	55	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSHGLG00100008533	SF3B4	55	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus