EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100008577 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 68138 bases
Position: chrJH166641.1:1763114-1831251
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100011562	zf-CCCH	PF00642.24	0.0002	1	1
ENSHGLP00100011561	zf-CCCH	PF00642.24	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100011697	RC3H1-201	7511	-	ENSHGLP00100011561	1133 (aa)	-	G5ARS5
ENSHGLT00100011698	RC3H1-202	3402	-	ENSHGLP00100011562	1133 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100008577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100008577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100008577	RC3H1	92	54.871	ENSHGLG00100018015	RC3H2	87	54.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100008577	RC3H1	100	94.444	ENSG00000135870	RC3H1	100	94.444	Homo_sapiens
ENSHGLG00100008577	RC3H1	100	93.998	ENSAMEG00000015657	RC3H1	100	93.998	Ailuropoda_melanoleuca
ENSHGLG00100008577	RC3H1	100	86.126	ENSAPLG00000005341	RC3H1	100	86.126	Anas_platyrhynchos
ENSHGLG00100008577	RC3H1	100	83.770	ENSACAG00000015271	RC3H1	100	83.493	Anolis_carolinensis
ENSHGLG00100008577	RC3H1	100	94.180	ENSANAG00000036716	RC3H1	100	94.268	Aotus_nancymaae
ENSHGLG00100008577	RC3H1	100	93.651	ENSBTAG00000052708	RC3H1	100	93.651	Bos_taurus
ENSHGLG00100008577	RC3H1	100	94.004	ENSCJAG00000009106	RC3H1	100	94.092	Callithrix_jacchus
ENSHGLG00100008577	RC3H1	100	94.175	ENSCAFG00000014434	RC3H1	100	94.175	Canis_familiaris
ENSHGLG00100008577	RC3H1	100	94.092	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSHGLG00100008577	RC3H1	100	94.086	ENSCHIG00000002873	RC3H1	100	94.086	Capra_hircus
ENSHGLG00100008577	RC3H1	99	92.674	ENSTSYG00000003913	RC3H1	99	92.674	Carlito_syrichta
ENSHGLG00100008577	RC3H1	100	93.386	ENSCPOG00000004349	RC3H1	100	93.034	Cavia_porcellus
ENSHGLG00100008577	RC3H1	100	91.887	ENSCCAG00000025652	RC3H1	98	94.264	Cebus_capucinus
ENSHGLG00100008577	RC3H1	100	94.621	ENSCATG00000033497	RC3H1	100	94.621	Cercocebus_atys
ENSHGLG00100008577	RC3H1	100	96.646	ENSCLAG00000011267	RC3H1	100	96.646	Chinchilla_lanigera
ENSHGLG00100008577	RC3H1	96	95.032	ENSCSAG00000011823	RC3H1	85	95.032	Chlorocebus_sabaeus
ENSHGLG00100008577	RC3H1	93	96.304	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSHGLG00100008577	RC3H1	100	94.537	ENSCANG00000032120	RC3H1	100	94.537	Colobus_angolensis_palliatus
ENSHGLG00100008577	RC3H1	100	93.027	ENSCGRG00001020812	Rc3h1	100	92.674	Cricetulus_griseus_chok1gshd
ENSHGLG00100008577	RC3H1	100	93.027	ENSCGRG00000011952	Rc3h1	100	92.674	Cricetulus_griseus_crigri
ENSHGLG00100008577	RC3H1	55	92.616	ENSDNOG00000011494	RC3H1	99	92.616	Dasypus_novemcinctus
ENSHGLG00100008577	RC3H1	100	93.998	ENSDORG00000004855	Rc3h1	100	93.910	Dipodomys_ordii
ENSHGLG00100008577	RC3H1	82	94.856	ENSETEG00000012064	RC3H1	87	94.856	Echinops_telfairi
ENSHGLG00100008577	RC3H1	100	93.116	ENSEASG00005017000	RC3H1	100	93.116	Equus_asinus_asinus
ENSHGLG00100008577	RC3H1	100	93.027	ENSECAG00000021208	RC3H1	100	93.027	Equus_caballus
ENSHGLG00100008577	RC3H1	83	95.378	ENSEEUG00000014861	RC3H1	93	82.560	Erinaceus_europaeus
ENSHGLG00100008577	RC3H1	100	94.621	ENSFCAG00000014924	RC3H1	100	94.621	Felis_catus
ENSHGLG00100008577	RC3H1	100	85.490	ENSFALG00000002947	RC3H1	100	84.965	Ficedula_albicollis
ENSHGLG00100008577	RC3H1	100	97.352	ENSFDAG00000013303	RC3H1	100	97.352	Fukomys_damarensis
ENSHGLG00100008577	RC3H1	100	85.614	ENSGALG00000004587	RC3H1	100	85.614	Gallus_gallus
ENSHGLG00100008577	RC3H1	100	85.689	ENSGAGG00000018194	RC3H1	100	85.865	Gopherus_agassizii
ENSHGLG00100008577	RC3H1	100	88.049	ENSGGOG00000005735	RC3H1	100	88.049	Gorilla_gorilla
ENSHGLG00100008577	RC3H1	88	94.981	ENSHGLG00000004183	-	99	94.981	Heterocephalus_glaber_female
ENSHGLG00100008577	RC3H1	100	93.739	ENSSTOG00000016033	RC3H1	100	93.651	Ictidomys_tridecemlineatus
ENSHGLG00100008577	RC3H1	100	93.027	ENSJJAG00000018915	Rc3h1	100	92.586	Jaculus_jaculus
ENSHGLG00100008577	RC3H1	100	74.413	ENSLACG00000016186	RC3H1	100	77.568	Latimeria_chalumnae
ENSHGLG00100008577	RC3H1	97	94.900	ENSLAFG00000004367	RC3H1	100	94.900	Loxodonta_africana
ENSHGLG00100008577	RC3H1	100	94.533	ENSMFAG00000033725	RC3H1	100	94.533	Macaca_fascicularis
ENSHGLG00100008577	RC3H1	100	94.621	ENSMMUG00000000630	RC3H1	100	94.621	Macaca_mulatta
ENSHGLG00100008577	RC3H1	100	94.621	ENSMNEG00000035968	RC3H1	100	94.621	Macaca_nemestrina
ENSHGLG00100008577	RC3H1	100	94.533	ENSMLEG00000037455	RC3H1	100	94.533	Mandrillus_leucophaeus
ENSHGLG00100008577	RC3H1	88	93.958	ENSMAUG00000020864	Rc3h1	93	93.555	Mesocricetus_auratus
ENSHGLG00100008577	RC3H1	100	95.146	ENSMICG00000003000	RC3H1	100	95.146	Microcebus_murinus
ENSHGLG00100008577	RC3H1	93	91.098	ENSMOCG00000016587	Rc3h1	98	90.814	Microtus_ochrogaster
ENSHGLG00100008577	RC3H1	100	90.308	ENSMODG00000004289	RC3H1	100	90.396	Monodelphis_domestica
ENSHGLG00100008577	RC3H1	100	92.056	MGP_CAROLIEiJ_G0014756	Rc3h1	100	91.703	Mus_caroli
ENSHGLG00100008577	RC3H1	100	91.792	ENSMUSG00000040423	Rc3h1	100	91.439	Mus_musculus
ENSHGLG00100008577	RC3H1	100	91.703	MGP_PahariEiJ_G0027992	Rc3h1	100	91.350	Mus_pahari
ENSHGLG00100008577	RC3H1	100	91.615	MGP_SPRETEiJ_G0015563	Rc3h1	100	91.262	Mus_spretus
ENSHGLG00100008577	RC3H1	100	93.827	ENSMPUG00000004747	RC3H1	100	93.557	Mustela_putorius_furo
ENSHGLG00100008577	RC3H1	100	92.939	ENSMLUG00000011127	RC3H1	100	92.939	Myotis_lucifugus
ENSHGLG00100008577	RC3H1	100	93.822	ENSNGAG00000011135	Rc3h1	100	93.469	Nannospalax_galili
ENSHGLG00100008577	RC3H1	100	94.356	ENSNLEG00000015327	RC3H1	100	94.356	Nomascus_leucogenys
ENSHGLG00100008577	RC3H1	99	81.256	ENSOPRG00000013068	RC3H1	99	80.902	Ochotona_princeps
ENSHGLG00100008577	RC3H1	100	96.293	ENSODEG00000014185	RC3H1	100	96.293	Octodon_degus
ENSHGLG00100008577	RC3H1	100	89.170	ENSOANG00000000924	RC3H1	100	89.345	Ornithorhynchus_anatinus
ENSHGLG00100008577	RC3H1	99	93.912	ENSOCUG00000004930	RC3H1	98	93.912	Oryctolagus_cuniculus
ENSHGLG00100008577	RC3H1	100	87.930	ENSOGAG00000004044	RC3H1	100	87.930	Otolemur_garnettii
ENSHGLG00100008577	RC3H1	100	94.040	ENSOARG00000013011	RC3H1	100	94.040	Ovis_aries
ENSHGLG00100008577	RC3H1	100	94.449	ENSPPAG00000039253	RC3H1	100	94.449	Pan_paniscus
ENSHGLG00100008577	RC3H1	100	94.086	ENSPPRG00000009007	RC3H1	100	94.086	Panthera_pardus
ENSHGLG00100008577	RC3H1	100	94.464	ENSPTIG00000015326	RC3H1	100	94.464	Panthera_tigris_altaica
ENSHGLG00100008577	RC3H1	100	94.449	ENSPTRG00000001702	RC3H1	100	94.449	Pan_troglodytes
ENSHGLG00100008577	RC3H1	100	94.533	ENSPANG00000008886	RC3H1	100	94.533	Papio_anubis
ENSHGLG00100008577	RC3H1	100	87.105	ENSPSIG00000016181	RC3H1	100	87.368	Pelodiscus_sinensis
ENSHGLG00100008577	RC3H1	100	91.968	ENSPEMG00000011966	Rc3h1	100	91.703	Peromyscus_maniculatus_bairdii
ENSHGLG00100008577	RC3H1	70	92.415	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSHGLG00100008577	RC3H1	100	91.093	ENSPPYG00000000490	RC3H1	98	94.073	Pongo_abelii
ENSHGLG00100008577	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSHGLG00100008577	RC3H1	83	93.910	ENSPCOG00000021795	RC3H1	96	93.910	Propithecus_coquereli
ENSHGLG00100008577	RC3H1	100	86.055	ENSPVAG00000007593	RC3H1	100	86.055	Pteropus_vampyrus
ENSHGLG00100008577	RC3H1	97	61.092	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSHGLG00100008577	RC3H1	100	94.537	ENSRBIG00000037743	RC3H1	100	94.537	Rhinopithecus_bieti
ENSHGLG00100008577	RC3H1	100	94.533	ENSRROG00000036546	RC3H1	100	94.533	Rhinopithecus_roxellana
ENSHGLG00100008577	RC3H1	93	84.543	ENSSBOG00000010664	RC3H1	100	88.079	Saimiri_boliviensis_boliviensis
ENSHGLG00100008577	RC3H1	100	89.437	ENSSHAG00000007589	RC3H1	100	89.525	Sarcophilus_harrisii
ENSHGLG00100008577	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSHGLG00100008577	RC3H1	100	82.456	ENSSPUG00000018472	RC3H1	100	81.930	Sphenodon_punctatus
ENSHGLG00100008577	RC3H1	100	94.881	ENSSSCG00000015498	RC3H1	100	94.881	Sus_scrofa
ENSHGLG00100008577	RC3H1	100	85.865	ENSTGUG00000004090	RC3H1	100	85.777	Taeniopygia_guttata
ENSHGLG00100008577	RC3H1	93	89.606	ENSTBEG00000005015	RC3H1	93	89.606	Tupaia_belangeri
ENSHGLG00100008577	RC3H1	100	94.366	ENSTTRG00000008572	RC3H1	100	94.366	Tursiops_truncatus
ENSHGLG00100008577	RC3H1	100	93.469	ENSUAMG00000019525	RC3H1	100	93.469	Ursus_americanus
ENSHGLG00100008577	RC3H1	100	93.915	ENSUMAG00000020087	RC3H1	100	93.915	Ursus_maritimus
ENSHGLG00100008577	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSHGLG00100008577	RC3H1	100	93.843	ENSVVUG00000014201	RC3H1	100	93.843	Vulpes_vulpes
ENSHGLG00100008577	RC3H1	100	78.000	ENSXETG00000020030	rc3h1	100	77.439	Xenopus_tropicalis