EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100008973 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 370 bases
Position: chrJH171000.1:1680492-1680861
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100012103	RRM_1	PF00076.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100012245	-	309	-	ENSHGLP00100012103	102 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100008973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100008973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100008973	-	99	71.930	ENSHGLG00100001021	-	96	71.930
ENSHGLG00100008973	-	100	64.348	ENSHGLG00100011703	-	96	64.348
ENSHGLG00100008973	-	63	30.769	ENSHGLG00100017688	NCBP2	50	30.769
ENSHGLG00100008973	-	66	70.000	ENSHGLG00100015249	-	64	70.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100008973	-	99	70.000	ENSG00000076053	RBM7	98	70.000	Homo_sapiens
ENSHGLG00100008973	-	69	53.012	ENSACIG00000021769	-	89	53.012	Amphilophus_citrinellus
ENSHGLG00100008973	-	69	55.422	ENSATEG00000000596	-	88	55.422	Anabas_testudineus
ENSHGLG00100008973	-	87	64.706	ENSANAG00000031879	-	63	64.706	Aotus_nancymaae
ENSHGLG00100008973	-	88	63.107	ENSANAG00000031340	-	64	63.107	Aotus_nancymaae
ENSHGLG00100008973	-	89	63.462	ENSCJAG00000011949	-	65	64.706	Callithrix_jacchus
ENSHGLG00100008973	-	79	69.149	ENSCAFG00020002518	-	61	69.149	Canis_lupus_dingo
ENSHGLG00100008973	-	73	73.563	ENSCHOG00000012747	-	59	73.563	Choloepus_hoffmanni
ENSHGLG00100008973	-	73	42.353	ENSDARG00000090202	rbm11	54	42.353	Danio_rerio
ENSHGLG00100008973	-	68	53.659	ENSDORG00000000801	Rbm11	57	53.659	Dipodomys_ordii
ENSHGLG00100008973	-	72	55.814	ENSEBUG00000009746	rbm7	57	55.814	Eptatretus_burgeri
ENSHGLG00100008973	-	67	53.086	ENSFHEG00000000845	-	90	53.086	Fundulus_heteroclitus
ENSHGLG00100008973	-	97	67.797	ENSGGOG00000009941	-	87	67.797	Gorilla_gorilla
ENSHGLG00100008973	-	99	71.930	ENSHGLG00000003564	-	96	71.930	Heterocephalus_glaber_female
ENSHGLG00100008973	-	100	64.348	ENSHGLG00000014428	-	96	64.348	Heterocephalus_glaber_female
ENSHGLG00100008973	-	66	70.000	ENSHGLG00000013918	-	64	70.000	Heterocephalus_glaber_female
ENSHGLG00100008973	-	67	53.086	ENSHCOG00000010866	-	85	53.086	Hippocampus_comes
ENSHGLG00100008973	-	68	39.024	ENSIPUG00000018209	rbm11	87	39.024	Ictalurus_punctatus
ENSHGLG00100008973	-	58	52.778	ENSKMAG00000001899	-	77	52.778	Kryptolebias_marmoratus
ENSHGLG00100008973	-	73	72.414	ENSMAUG00000017938	-	56	72.414	Mesocricetus_auratus
ENSHGLG00100008973	-	73	72.414	ENSMUSG00000042396	Rbm7	55	72.414	Mus_musculus
ENSHGLG00100008973	-	79	69.149	ENSODEG00000010164	-	66	68.041	Octodon_degus
ENSHGLG00100008973	-	72	50.000	ENSPMGG00000001523	rbm7	90	50.000	Periophthalmus_magnuspinnatus
ENSHGLG00100008973	-	72	54.023	ENSPMAG00000001518	-	98	54.023	Petromyzon_marinus
ENSHGLG00100008973	-	68	53.659	ENSPCAG00000008368	-	57	53.659	Procavia_capensis
ENSHGLG00100008973	-	63	44.156	ENSPNAG00000009243	rbm11	85	44.156	Pygocentrus_nattereri
ENSHGLG00100008973	-	72	48.276	ENSSFOG00015013138	rbm11	69	48.276	Scleropages_formosus
ENSHGLG00100008973	-	89	50.000	ENSSPAG00000019320	rbm7	81	50.000	Stegastes_partitus
ENSHGLG00100008973	-	66	51.250	ENSXCOG00000001191	-	88	51.250	Xiphophorus_couchianus