EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100009215 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 11114 bases
Position: chrJH167378.1:1069596-1080709
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100012442	zf-CCCH	PF00642.24	1.3e-19	1	2
ENSHGLP00100012442	zf-CCCH	PF00642.24	1.3e-19	2	2
ENSHGLP00100012443	zf-CCCH	PF00642.24	5.4e-15	1	2
ENSHGLP00100012443	zf-CCCH	PF00642.24	5.4e-15	2	2
ENSHGLP00100012443	zf-CCHC	PF00098.23	2.3e-06	1	1
ENSHGLP00100012442	zf-CCHC	PF00098.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100012585	-	702	-	ENSHGLP00100012442	233 (aa)	-	-
ENSHGLT00100012586	-	522	-	ENSHGLP00100012443	173 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100009215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100009215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100009215	-	100	65.909	ENSHGLG00100017302	-	79	63.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100009215	-	100	96.023	ENSG00000160917	CPSF4	98	100.000	Homo_sapiens
ENSHGLG00100009215	-	79	73.770	ENSAPOG00000004921	cpsf4	100	73.770	Acanthochromis_polyacanthus
ENSHGLG00100009215	-	100	96.186	ENSAMEG00000006252	CPSF4	87	96.186	Ailuropoda_melanoleuca
ENSHGLG00100009215	-	100	74.153	ENSACIG00000009248	cpsf4	85	72.574	Amphilophus_citrinellus
ENSHGLG00100009215	-	100	82.203	ENSAOCG00000019616	cpsf4	87	82.203	Amphiprion_ocellaris
ENSHGLG00100009215	-	100	82.203	ENSAPEG00000011679	cpsf4	87	82.203	Amphiprion_percula
ENSHGLG00100009215	-	100	81.092	ENSATEG00000007010	cpsf4	87	81.092	Anabas_testudineus
ENSHGLG00100009215	-	100	91.102	ENSACAG00000012941	CPSF4	77	91.102	Anolis_carolinensis
ENSHGLG00100009215	-	100	96.023	ENSANAG00000021360	CPSF4	87	95.339	Aotus_nancymaae
ENSHGLG00100009215	-	100	80.508	ENSACLG00000010374	cpsf4	87	80.508	Astatotilapia_calliptera
ENSHGLG00100009215	-	100	81.857	ENSAMXG00000031647	cpsf4	87	82.278	Astyanax_mexicanus
ENSHGLG00100009215	-	100	85.169	ENSBTAG00000002090	CPSF4	86	85.169	Bos_taurus
ENSHGLG00100009215	-	100	96.023	ENSCJAG00000015826	CPSF4	87	95.339	Callithrix_jacchus
ENSHGLG00100009215	-	100	96.045	ENSCAFG00000015036	CPSF4	87	95.763	Canis_familiaris
ENSHGLG00100009215	-	95	95.928	ENSCAFG00020014462	CPSF4	84	95.928	Canis_lupus_dingo
ENSHGLG00100009215	-	100	96.023	ENSCHIG00000014313	CPSF4	87	95.339	Capra_hircus
ENSHGLG00100009215	-	100	96.591	ENSTSYG00000005712	-	83	96.591	Carlito_syrichta
ENSHGLG00100009215	-	100	87.079	ENSTSYG00000014604	-	83	87.079	Carlito_syrichta
ENSHGLG00100009215	-	100	87.640	ENSTSYG00000008195	-	98	87.640	Carlito_syrichta
ENSHGLG00100009215	-	95	96.380	ENSCAPG00000013881	CPSF4	87	96.380	Cavia_aperea
ENSHGLG00100009215	-	100	97.159	ENSCPOG00000001783	CPSF4	83	97.159	Cavia_porcellus
ENSHGLG00100009215	-	100	96.023	ENSCCAG00000028291	CPSF4	87	95.339	Cebus_capucinus
ENSHGLG00100009215	-	100	96.023	ENSCATG00000038440	CPSF4	87	95.339	Cercocebus_atys
ENSHGLG00100009215	-	100	96.591	ENSCLAG00000007050	CPSF4	87	95.763	Chinchilla_lanigera
ENSHGLG00100009215	-	100	95.339	ENSCSAG00000017795	CPSF4	87	95.339	Chlorocebus_sabaeus
ENSHGLG00100009215	-	93	93.981	ENSCPBG00000020869	CPSF4	99	93.981	Chrysemys_picta_bellii
ENSHGLG00100009215	-	55	83.077	ENSCPBG00000010269	-	79	82.443	Chrysemys_picta_bellii
ENSHGLG00100009215	-	96	52.632	ENSCING00000021080	-	84	52.402	Ciona_intestinalis
ENSHGLG00100009215	-	96	50.602	ENSCSAVG00000011469	-	85	52.174	Ciona_savignyi
ENSHGLG00100009215	-	100	96.023	ENSCANG00000019384	CPSF4	87	95.339	Colobus_angolensis_palliatus
ENSHGLG00100009215	-	100	97.159	ENSCGRG00001024184	Cpsf4	83	97.159	Cricetulus_griseus_chok1gshd
ENSHGLG00100009215	-	100	97.159	ENSCGRG00000013892	Cpsf4	87	96.186	Cricetulus_griseus_crigri
ENSHGLG00100009215	-	100	81.818	ENSCSEG00000019055	cpsf4	83	81.818	Cynoglossus_semilaevis
ENSHGLG00100009215	-	100	80.508	ENSCVAG00000016528	cpsf4	87	80.508	Cyprinodon_variegatus
ENSHGLG00100009215	-	100	81.857	ENSDARG00000020217	cpsf4	87	81.857	Danio_rerio
ENSHGLG00100009215	-	100	95.763	ENSDNOG00000006344	CPSF4	87	95.763	Dasypus_novemcinctus
ENSHGLG00100009215	-	94	96.347	ENSDORG00000000742	Cpsf4	100	96.347	Dipodomys_ordii
ENSHGLG00100009215	-	100	54.440	FBgn0015621	Clp	87	53.488	Drosophila_melanogaster
ENSHGLG00100009215	-	68	100.000	ENSETEG00000002608	CPSF4	57	100.000	Echinops_telfairi
ENSHGLG00100009215	-	99	64.407	ENSEBUG00000012552	cpsf4	84	62.821	Eptatretus_burgeri
ENSHGLG00100009215	-	100	86.441	ENSEASG00005002487	CPSF4	86	86.441	Equus_asinus_asinus
ENSHGLG00100009215	-	100	97.159	ENSECAG00000007525	CPSF4	87	96.186	Equus_caballus
ENSHGLG00100009215	-	82	94.030	ENSEEUG00000002158	CPSF4	73	95.238	Erinaceus_europaeus
ENSHGLG00100009215	-	100	79.167	ENSELUG00000011481	cpsf4	87	76.667	Esox_lucius
ENSHGLG00100009215	-	100	97.159	ENSFCAG00000015070	CPSF4	87	96.186	Felis_catus
ENSHGLG00100009215	-	100	82.203	ENSFALG00000013799	CPSF4	86	80.508	Ficedula_albicollis
ENSHGLG00100009215	-	100	97.159	ENSFDAG00000014092	CPSF4	96	96.186	Fukomys_damarensis
ENSHGLG00100009215	-	100	80.085	ENSFHEG00000010880	cpsf4	87	80.085	Fundulus_heteroclitus
ENSHGLG00100009215	-	100	73.950	ENSGMOG00000002330	cpsf4	86	72.385	Gadus_morhua
ENSHGLG00100009215	-	79	38.743	ENSGALG00000004441	-	92	36.923	Gallus_gallus
ENSHGLG00100009215	-	100	81.780	ENSGALG00000004714	CPSF4	86	80.508	Gallus_gallus
ENSHGLG00100009215	-	100	80.085	ENSGAFG00000010580	cpsf4	87	80.085	Gambusia_affinis
ENSHGLG00100009215	-	100	74.790	ENSGACG00000007792	cpsf4	86	73.109	Gasterosteus_aculeatus
ENSHGLG00100009215	-	100	92.373	ENSGAGG00000021835	CPSF4	87	92.373	Gopherus_agassizii
ENSHGLG00100009215	-	55	83.077	ENSGAGG00000020579	-	73	83.077	Gopherus_agassizii
ENSHGLG00100009215	-	100	96.023	ENSGGOG00000015131	CPSF4	87	95.339	Gorilla_gorilla
ENSHGLG00100009215	-	100	80.508	ENSHBUG00000013699	cpsf4	87	80.508	Haplochromis_burtoni
ENSHGLG00100009215	-	100	98.305	ENSHGLG00000017150	CPSF4	87	98.305	Heterocephalus_glaber_female
ENSHGLG00100009215	-	100	77.966	ENSHCOG00000004397	cpsf4	87	77.966	Hippocampus_comes
ENSHGLG00100009215	-	100	80.672	ENSIPUG00000017147	cpsf4	87	81.513	Ictalurus_punctatus
ENSHGLG00100009215	-	100	97.159	ENSSTOG00000001688	CPSF4	87	96.186	Ictidomys_tridecemlineatus
ENSHGLG00100009215	-	100	96.591	ENSJJAG00000019426	Cpsf4	87	95.763	Jaculus_jaculus
ENSHGLG00100009215	-	100	79.237	ENSKMAG00000015642	cpsf4	87	79.237	Kryptolebias_marmoratus
ENSHGLG00100009215	-	100	85.232	ENSLACG00000010938	CPSF4	87	85.232	Latimeria_chalumnae
ENSHGLG00100009215	-	100	58.228	ENSLACG00000018470	-	86	57.384	Latimeria_chalumnae
ENSHGLG00100009215	-	100	85.593	ENSLOCG00000004814	cpsf4	87	85.593	Lepisosteus_oculatus
ENSHGLG00100009215	-	100	95.763	ENSLAFG00000000159	CPSF4	99	96.875	Loxodonta_africana
ENSHGLG00100009215	-	100	96.023	ENSMFAG00000001462	CPSF4	99	86.111	Macaca_fascicularis
ENSHGLG00100009215	-	100	96.023	ENSMMUG00000019191	CPSF4	87	95.339	Macaca_mulatta
ENSHGLG00100009215	-	100	96.023	ENSMNEG00000032306	CPSF4	87	95.339	Macaca_nemestrina
ENSHGLG00100009215	-	100	96.023	ENSMLEG00000034721	CPSF4	87	95.339	Mandrillus_leucophaeus
ENSHGLG00100009215	-	100	80.508	ENSMAMG00000006244	cpsf4	87	79.412	Mastacembelus_armatus
ENSHGLG00100009215	-	100	80.508	ENSMZEG00005007515	cpsf4	87	80.508	Maylandia_zebra
ENSHGLG00100009215	-	100	81.780	ENSMGAG00000004235	CPSF4	99	80.508	Meleagris_gallopavo
ENSHGLG00100009215	-	100	97.159	ENSMAUG00000021253	Cpsf4	87	96.186	Mesocricetus_auratus
ENSHGLG00100009215	-	100	96.023	ENSMICG00000017429	CPSF4	87	95.339	Microcebus_murinus
ENSHGLG00100009215	-	100	97.159	ENSMOCG00000014901	Cpsf4	87	96.186	Microtus_ochrogaster
ENSHGLG00100009215	-	100	81.818	ENSMMOG00000001813	cpsf4	87	81.356	Mola_mola
ENSHGLG00100009215	-	100	93.220	ENSMODG00000001367	CPSF4	87	93.220	Monodelphis_domestica
ENSHGLG00100009215	-	100	79.237	ENSMALG00000012611	cpsf4	87	79.237	Monopterus_albus
ENSHGLG00100009215	-	100	97.159	MGP_CAROLIEiJ_G0028012	Cpsf4	87	96.186	Mus_caroli
ENSHGLG00100009215	-	100	97.159	ENSMUSG00000029625	Cpsf4	87	96.186	Mus_musculus
ENSHGLG00100009215	-	100	97.159	MGP_PahariEiJ_G0024581	Cpsf4	87	96.186	Mus_pahari
ENSHGLG00100009215	-	100	96.591	MGP_SPRETEiJ_G0029013	Cpsf4	87	95.763	Mus_spretus
ENSHGLG00100009215	-	100	96.186	ENSMPUG00000016508	CPSF4	87	96.186	Mustela_putorius_furo
ENSHGLG00100009215	-	100	85.593	ENSMLUG00000010980	CPSF4	99	82.627	Myotis_lucifugus
ENSHGLG00100009215	-	100	96.591	ENSNGAG00000001567	Cpsf4	87	95.763	Nannospalax_galili
ENSHGLG00100009215	-	100	80.508	ENSNBRG00000003943	cpsf4	93	80.508	Neolamprologus_brichardi
ENSHGLG00100009215	-	100	96.023	ENSNLEG00000011074	CPSF4	87	92.373	Nomascus_leucogenys
ENSHGLG00100009215	-	100	93.220	ENSMEUG00000006955	CPSF4	87	93.220	Notamacropus_eugenii
ENSHGLG00100009215	-	100	95.763	ENSOPRG00000013663	CPSF4	87	95.763	Ochotona_princeps
ENSHGLG00100009215	-	100	97.159	ENSODEG00000011181	-	87	96.186	Octodon_degus
ENSHGLG00100009215	-	100	70.000	ENSODEG00000009779	-	87	70.000	Octodon_degus
ENSHGLG00100009215	-	91	80.723	ENSODEG00000018283	-	75	80.723	Octodon_degus
ENSHGLG00100009215	-	100	80.508	ENSONIG00000008495	cpsf4	87	80.508	Oreochromis_niloticus
ENSHGLG00100009215	-	100	91.949	ENSOANG00000007729	CPSF4	99	91.949	Ornithorhynchus_anatinus
ENSHGLG00100009215	-	94	56.000	ENSOANG00000009568	-	83	53.540	Ornithorhynchus_anatinus
ENSHGLG00100009215	-	100	96.186	ENSOCUG00000002437	CPSF4	61	96.186	Oryctolagus_cuniculus
ENSHGLG00100009215	-	100	79.237	ENSORLG00000022798	cpsf4	87	79.237	Oryzias_latipes
ENSHGLG00100009215	-	100	79.237	ENSORLG00020008548	cpsf4	87	79.237	Oryzias_latipes_hni
ENSHGLG00100009215	-	100	79.237	ENSORLG00015019575	cpsf4	87	79.237	Oryzias_latipes_hsok
ENSHGLG00100009215	-	100	80.114	ENSOMEG00000005176	cpsf4	87	78.481	Oryzias_melastigma
ENSHGLG00100009215	-	100	95.763	ENSOGAG00000010884	CPSF4	87	95.763	Otolemur_garnettii
ENSHGLG00100009215	-	100	84.583	ENSOARG00000018668	CPSF4	87	84.167	Ovis_aries
ENSHGLG00100009215	-	100	95.455	ENSPPAG00000043355	CPSF4	87	94.915	Pan_paniscus
ENSHGLG00100009215	-	100	97.159	ENSPPRG00000003134	CPSF4	87	96.186	Panthera_pardus
ENSHGLG00100009215	-	100	96.591	ENSPTIG00000005604	CPSF4	87	95.763	Panthera_tigris_altaica
ENSHGLG00100009215	-	100	95.455	ENSPTRG00000019453	CPSF4	87	94.915	Pan_troglodytes
ENSHGLG00100009215	-	100	96.023	ENSPANG00000023123	CPSF4	87	95.339	Papio_anubis
ENSHGLG00100009215	-	100	81.250	ENSPKIG00000014278	cpsf4	87	81.250	Paramormyrops_kingsleyae
ENSHGLG00100009215	-	93	58.065	ENSPSIG00000018198	-	98	57.407	Pelodiscus_sinensis
ENSHGLG00100009215	-	93	93.519	ENSPSIG00000011229	CPSF4	99	93.519	Pelodiscus_sinensis
ENSHGLG00100009215	-	94	75.342	ENSPMGG00000017735	cpsf4	81	73.059	Periophthalmus_magnuspinnatus
ENSHGLG00100009215	-	100	97.159	ENSPEMG00000004508	Cpsf4	87	96.186	Peromyscus_maniculatus_bairdii
ENSHGLG00100009215	-	100	93.220	ENSPCIG00000024776	CPSF4	87	93.220	Phascolarctos_cinereus
ENSHGLG00100009215	-	100	80.085	ENSPFOG00000014912	cpsf4	87	80.085	Poecilia_formosa
ENSHGLG00100009215	-	100	70.763	ENSPLAG00000009599	cpsf4	86	71.610	Poecilia_latipinna
ENSHGLG00100009215	-	100	80.085	ENSPMEG00000009790	cpsf4	87	80.085	Poecilia_mexicana
ENSHGLG00100009215	-	100	79.237	ENSPREG00000018166	cpsf4	87	79.237	Poecilia_reticulata
ENSHGLG00100009215	-	100	94.492	ENSPPYG00000017378	CPSF4	100	94.492	Pongo_abelii
ENSHGLG00100009215	-	100	95.763	ENSPCAG00000001892	CPSF4	87	95.763	Procavia_capensis
ENSHGLG00100009215	-	100	96.591	ENSPCOG00000012771	CPSF4	87	95.763	Propithecus_coquereli
ENSHGLG00100009215	-	94	96.804	ENSPVAG00000007531	CPSF4	81	96.804	Pteropus_vampyrus
ENSHGLG00100009215	-	100	80.508	ENSPNYG00000018559	cpsf4	87	80.508	Pundamilia_nyererei
ENSHGLG00100009215	-	100	82.700	ENSPNAG00000003736	cpsf4	87	82.700	Pygocentrus_nattereri
ENSHGLG00100009215	-	100	97.159	ENSRNOG00000000985	Cpsf4	83	97.159	Rattus_norvegicus
ENSHGLG00100009215	-	100	96.023	ENSRBIG00000033886	CPSF4	100	96.023	Rhinopithecus_bieti
ENSHGLG00100009215	-	100	96.023	ENSRROG00000040431	CPSF4	83	96.023	Rhinopithecus_roxellana
ENSHGLG00100009215	-	100	96.023	ENSSBOG00000020493	CPSF4	99	86.111	Saimiri_boliviensis_boliviensis
ENSHGLG00100009215	-	100	93.220	ENSSHAG00000011533	CPSF4	87	93.220	Sarcophilus_harrisii
ENSHGLG00100009215	-	100	81.818	ENSSFOG00015007883	cpsf4	87	82.645	Scleropages_formosus
ENSHGLG00100009215	-	100	75.000	ENSSMAG00000006374	cpsf4	86	73.729	Scophthalmus_maximus
ENSHGLG00100009215	-	100	80.508	ENSSDUG00000018887	cpsf4	87	80.508	Seriola_dumerili
ENSHGLG00100009215	-	100	80.508	ENSSLDG00000019078	cpsf4	87	80.508	Seriola_lalandi_dorsalis
ENSHGLG00100009215	-	100	95.763	ENSSARG00000012416	CPSF4	100	95.763	Sorex_araneus
ENSHGLG00100009215	-	100	90.678	ENSSPUG00000003549	CPSF4	87	90.678	Sphenodon_punctatus
ENSHGLG00100009215	-	95	57.778	ENSSPUG00000014803	-	81	58.222	Sphenodon_punctatus
ENSHGLG00100009215	-	100	75.847	ENSSPAG00000006174	cpsf4	85	72.881	Stegastes_partitus
ENSHGLG00100009215	-	100	86.017	ENSSSCG00000026896	CPSF4	86	86.017	Sus_scrofa
ENSHGLG00100009215	-	100	81.513	ENSTGUG00000007552	CPSF4	86	79.832	Taeniopygia_guttata
ENSHGLG00100009215	-	100	78.243	ENSTRUG00000024220	cpsf4	87	78.243	Takifugu_rubripes
ENSHGLG00100009215	-	100	77.119	ENSTNIG00000006265	cpsf4	87	78.814	Tetraodon_nigroviridis
ENSHGLG00100009215	-	100	86.017	ENSTBEG00000011406	CPSF4	100	86.017	Tupaia_belangeri
ENSHGLG00100009215	-	100	72.881	ENSTTRG00000003007	CPSF4	61	100.000	Tursiops_truncatus
ENSHGLG00100009215	-	91	79.907	ENSUAMG00000008051	CPSF4	72	81.776	Ursus_americanus
ENSHGLG00100009215	-	100	82.212	ENSUMAG00000009474	CPSF4	86	82.627	Ursus_maritimus
ENSHGLG00100009215	-	100	86.017	ENSVVUG00000008824	CPSF4	86	86.017	Vulpes_vulpes
ENSHGLG00100009215	-	99	59.574	ENSXETG00000004641	cpsf4l	86	57.787	Xenopus_tropicalis
ENSHGLG00100009215	-	100	85.366	ENSXETG00000009892	cpsf4	87	85.366	Xenopus_tropicalis
ENSHGLG00100009215	-	100	80.682	ENSXCOG00000016040	cpsf4	87	79.661	Xiphophorus_couchianus
ENSHGLG00100009215	-	100	80.085	ENSXMAG00000024670	cpsf4	87	80.085	Xiphophorus_maculatus