EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100009637 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 86841 bases
Position: chrJH168392.1:121979-208819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100013018	EST1	PF10374.9	1.4e-25	1	1
ENSHGLP00100013019	EST1	PF10374.9	1.6e-25	1	1
ENSHGLP00100013018	EST1_DNA_bind	PF10373.9	5.9e-56	1	1
ENSHGLP00100013019	EST1_DNA_bind	PF10373.9	1.5e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100013168	-	3312	-	ENSHGLP00100013019	1103 (aa)	-	-
ENSHGLT00100013167	-	3414	-	ENSHGLP00100013018	1137 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100009637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100009637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100009637	-	100	91.351	ENSHGLG00100004878	-	98	91.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100009637	-	100	97.274	ENSG00000116698	SMG7	100	97.274	Homo_sapiens
ENSHGLG00100009637	-	88	74.281	ENSAPOG00000009611	smg7	95	74.281	Acanthochromis_polyacanthus
ENSHGLG00100009637	-	99	96.457	ENSAMEG00000002357	SMG7	99	96.457	Ailuropoda_melanoleuca
ENSHGLG00100009637	-	97	63.993	ENSACIG00000015152	smg7	100	64.617	Amphilophus_citrinellus
ENSHGLG00100009637	-	99	66.296	ENSAOCG00000013538	smg7	99	66.752	Amphiprion_ocellaris
ENSHGLG00100009637	-	99	66.154	ENSAPEG00000007851	smg7	99	66.610	Amphiprion_percula
ENSHGLG00100009637	-	99	65.874	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSHGLG00100009637	-	100	88.276	ENSAPLG00000015811	SMG7	100	88.101	Anas_platyrhynchos
ENSHGLG00100009637	-	100	83.208	ENSACAG00000014989	SMG7	100	83.709	Anolis_carolinensis
ENSHGLG00100009637	-	100	96.922	ENSANAG00000028114	SMG7	100	96.922	Aotus_nancymaae
ENSHGLG00100009637	-	99	65.251	ENSACLG00000022079	smg7	99	66.324	Astatotilapia_calliptera
ENSHGLG00100009637	-	99	67.478	ENSAMXG00000020809	smg7	99	67.767	Astyanax_mexicanus
ENSHGLG00100009637	-	100	95.427	ENSBTAG00000008003	SMG7	100	95.427	Bos_taurus
ENSHGLG00100009637	-	100	96.834	ENSCJAG00000005135	SMG7	100	96.834	Callithrix_jacchus
ENSHGLG00100009637	-	100	94.920	ENSCAFG00000013276	SMG7	96	94.920	Canis_familiaris
ENSHGLG00100009637	-	99	96.283	ENSCAFG00020015475	SMG7	99	96.283	Canis_lupus_dingo
ENSHGLG00100009637	-	100	94.385	ENSCHIG00000018192	SMG7	98	94.385	Capra_hircus
ENSHGLG00100009637	-	100	96.658	ENSTSYG00000002667	SMG7	100	96.658	Carlito_syrichta
ENSHGLG00100009637	-	100	96.257	ENSCPOG00000008906	SMG7	99	96.253	Cavia_porcellus
ENSHGLG00100009637	-	100	97.186	ENSCCAG00000028596	SMG7	100	97.186	Cebus_capucinus
ENSHGLG00100009637	-	100	97.449	ENSCATG00000011063	SMG7	100	97.449	Cercocebus_atys
ENSHGLG00100009637	-	100	97.186	ENSCLAG00000010751	SMG7	100	97.186	Chinchilla_lanigera
ENSHGLG00100009637	-	100	95.544	ENSCSAG00000012654	SMG7	96	95.544	Chlorocebus_sabaeus
ENSHGLG00100009637	-	93	86.819	ENSCHOG00000010522	SMG7	93	87.202	Choloepus_hoffmanni
ENSHGLG00100009637	-	100	90.973	ENSCPBG00000015724	SMG7	100	90.798	Chrysemys_picta_bellii
ENSHGLG00100009637	-	99	97.340	ENSCANG00000015680	SMG7	99	97.340	Colobus_angolensis_palliatus
ENSHGLG00100009637	-	100	94.899	ENSCGRG00001013705	Smg7	100	94.899	Cricetulus_griseus_chok1gshd
ENSHGLG00100009637	-	100	94.029	ENSCGRG00000018401	Smg7	100	94.854	Cricetulus_griseus_crigri
ENSHGLG00100009637	-	94	69.000	ENSCVAG00000011842	smg7	99	68.500	Cyprinodon_variegatus
ENSHGLG00100009637	-	99	67.416	ENSDARG00000060767	smg7	99	67.298	Danio_rerio
ENSHGLG00100009637	-	100	94.296	ENSDORG00000007331	Smg7	98	94.296	Dipodomys_ordii
ENSHGLG00100009637	-	97	93.272	ENSETEG00000002654	SMG7	98	93.272	Echinops_telfairi
ENSHGLG00100009637	-	100	95.633	ENSEASG00005006524	SMG7	98	95.633	Equus_asinus_asinus
ENSHGLG00100009637	-	100	95.722	ENSECAG00000004313	SMG7	99	95.652	Equus_caballus
ENSHGLG00100009637	-	96	94.096	ENSEEUG00000002024	SMG7	92	94.096	Erinaceus_europaeus
ENSHGLG00100009637	-	93	73.692	ENSELUG00000010293	smg7	99	65.429	Esox_lucius
ENSHGLG00100009637	-	100	95.276	ENSFCAG00000010900	SMG7	98	95.276	Felis_catus
ENSHGLG00100009637	-	100	81.447	ENSFALG00000003047	SMG7	100	81.548	Ficedula_albicollis
ENSHGLG00100009637	-	100	96.791	ENSFDAG00000012121	SMG7	99	96.791	Fukomys_damarensis
ENSHGLG00100009637	-	99	64.610	ENSFHEG00000011073	smg7	99	65.240	Fundulus_heteroclitus
ENSHGLG00100009637	-	89	64.382	ENSGMOG00000004916	smg7	91	64.382	Gadus_morhua
ENSHGLG00100009637	-	100	88.636	ENSGALG00000004667	SMG7	100	88.462	Gallus_gallus
ENSHGLG00100009637	-	99	64.828	ENSGAFG00000019000	smg7	99	64.655	Gambusia_affinis
ENSHGLG00100009637	-	97	63.363	ENSGACG00000001634	smg7	99	63.237	Gasterosteus_aculeatus
ENSHGLG00100009637	-	100	97.186	ENSGGOG00000002342	SMG7	100	97.186	Gorilla_gorilla
ENSHGLG00100009637	-	99	64.685	ENSHBUG00000003726	smg7	96	72.081	Haplochromis_burtoni
ENSHGLG00100009637	-	100	99.912	ENSHGLG00000009353	SMG7	100	99.912	Heterocephalus_glaber_female
ENSHGLG00100009637	-	99	68.202	ENSIPUG00000016997	smg7	99	68.549	Ictalurus_punctatus
ENSHGLG00100009637	-	100	95.722	ENSSTOG00000000401	SMG7	98	95.722	Ictidomys_tridecemlineatus
ENSHGLG00100009637	-	100	93.316	ENSJJAG00000012351	Smg7	98	93.316	Jaculus_jaculus
ENSHGLG00100009637	-	97	62.248	ENSKMAG00000004900	smg7	100	62.337	Kryptolebias_marmoratus
ENSHGLG00100009637	-	99	65.919	ENSLBEG00000002983	smg7	99	66.350	Labrus_bergylta
ENSHGLG00100009637	-	52	62.833	ENSLBEG00000005220	-	75	62.833	Labrus_bergylta
ENSHGLG00100009637	-	99	74.848	ENSLACG00000000972	SMG7	99	74.826	Latimeria_chalumnae
ENSHGLG00100009637	-	100	65.599	ENSLOCG00000002010	smg7	99	66.501	Lepisosteus_oculatus
ENSHGLG00100009637	-	100	94.652	ENSLAFG00000008186	SMG7	98	94.652	Loxodonta_africana
ENSHGLG00100009637	-	100	95.633	ENSMFAG00000031653	SMG7	98	95.633	Macaca_fascicularis
ENSHGLG00100009637	-	100	95.722	ENSMMUG00000018458	SMG7	99	96.546	Macaca_mulatta
ENSHGLG00100009637	-	100	97.449	ENSMNEG00000034798	SMG7	100	97.449	Macaca_nemestrina
ENSHGLG00100009637	-	100	97.449	ENSMLEG00000037170	SMG7	100	97.449	Mandrillus_leucophaeus
ENSHGLG00100009637	-	88	65.537	ENSMAMG00000018733	smg7	85	65.764	Mastacembelus_armatus
ENSHGLG00100009637	-	99	65.812	ENSMZEG00005015247	smg7	99	66.238	Maylandia_zebra
ENSHGLG00100009637	-	97	88.410	ENSMGAG00000001561	SMG7	98	88.230	Meleagris_gallopavo
ENSHGLG00100009637	-	100	95.251	ENSMAUG00000019484	Smg7	100	95.251	Mesocricetus_auratus
ENSHGLG00100009637	-	100	97.274	ENSMICG00000007145	SMG7	100	97.274	Microcebus_murinus
ENSHGLG00100009637	-	100	95.163	ENSMOCG00000020748	Smg7	100	95.163	Microtus_ochrogaster
ENSHGLG00100009637	-	99	64.558	ENSMMOG00000001524	smg7	99	64.935	Mola_mola
ENSHGLG00100009637	-	92	92.410	ENSMODG00000007139	SMG7	99	92.410	Monodelphis_domestica
ENSHGLG00100009637	-	97	67.980	ENSMALG00000000061	smg7	92	67.980	Monopterus_albus
ENSHGLG00100009637	-	100	94.811	MGP_CAROLIEiJ_G0014704	Smg7	100	94.459	Mus_caroli
ENSHGLG00100009637	-	100	94.723	ENSMUSG00000042772	Smg7	100	94.723	Mus_musculus
ENSHGLG00100009637	-	100	94.635	MGP_PahariEiJ_G0027940	Smg7	100	94.635	Mus_pahari
ENSHGLG00100009637	-	100	94.811	MGP_SPRETEiJ_G0015511	Smg7	100	94.811	Mus_spretus
ENSHGLG00100009637	-	100	95.187	ENSMPUG00000011732	SMG7	97	95.187	Mustela_putorius_furo
ENSHGLG00100009637	-	100	94.385	ENSMLUG00000015417	SMG7	98	94.385	Myotis_lucifugus
ENSHGLG00100009637	-	100	95.778	ENSNGAG00000009836	Smg7	100	95.163	Nannospalax_galili
ENSHGLG00100009637	-	98	61.217	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSHGLG00100009637	-	100	97.449	ENSNLEG00000018018	SMG7	100	97.449	Nomascus_leucogenys
ENSHGLG00100009637	-	70	92.276	ENSMEUG00000004681	SMG7	73	92.276	Notamacropus_eugenii
ENSHGLG00100009637	-	97	82.028	ENSOPRG00000013942	SMG7	95	81.751	Ochotona_princeps
ENSHGLG00100009637	-	100	97.625	ENSODEG00000010390	SMG7	100	97.625	Octodon_degus
ENSHGLG00100009637	-	99	64.860	ENSONIG00000000277	smg7	99	65.927	Oreochromis_niloticus
ENSHGLG00100009637	-	100	88.642	ENSOANG00000000994	SMG7	99	88.909	Ornithorhynchus_anatinus
ENSHGLG00100009637	-	100	87.879	ENSOCUG00000005887	SMG7	91	88.057	Oryctolagus_cuniculus
ENSHGLG00100009637	-	99	63.676	ENSORLG00000007314	smg7	70	93.421	Oryzias_latipes
ENSHGLG00100009637	-	99	64.107	ENSORLG00020015779	smg7	70	93.421	Oryzias_latipes_hni
ENSHGLG00100009637	-	99	63.972	ENSORLG00015012289	smg7	99	63.715	Oryzias_latipes_hsok
ENSHGLG00100009637	-	100	61.060	ENSOMEG00000002328	smg7	99	62.046	Oryzias_melastigma
ENSHGLG00100009637	-	97	93.641	ENSOGAG00000003107	SMG7	92	93.548	Otolemur_garnettii
ENSHGLG00100009637	-	100	94.296	ENSOARG00000001352	SMG7	100	92.046	Ovis_aries
ENSHGLG00100009637	-	100	97.449	ENSPPAG00000031619	SMG7	100	97.449	Pan_paniscus
ENSHGLG00100009637	-	100	97.010	ENSPPRG00000011222	SMG7	100	97.010	Panthera_pardus
ENSHGLG00100009637	-	97	95.300	ENSPTIG00000007242	SMG7	100	92.664	Panthera_tigris_altaica
ENSHGLG00100009637	-	100	97.449	ENSPTRG00000001764	SMG7	100	97.449	Pan_troglodytes
ENSHGLG00100009637	-	100	97.449	ENSPANG00000004520	SMG7	100	97.449	Papio_anubis
ENSHGLG00100009637	-	99	64.386	ENSPKIG00000007242	smg7	98	67.500	Paramormyrops_kingsleyae
ENSHGLG00100009637	-	100	89.403	ENSPSIG00000012201	SMG7	100	89.643	Pelodiscus_sinensis
ENSHGLG00100009637	-	71	43.483	ENSPMGG00000021833	smg7	89	57.000	Periophthalmus_magnuspinnatus
ENSHGLG00100009637	-	100	93.226	ENSPEMG00000011315	Smg7	98	93.226	Peromyscus_maniculatus_bairdii
ENSHGLG00100009637	-	100	92.882	ENSPCIG00000003786	SMG7	100	92.707	Phascolarctos_cinereus
ENSHGLG00100009637	-	100	61.461	ENSPFOG00000019219	smg7	99	62.015	Poecilia_formosa
ENSHGLG00100009637	-	99	64.944	ENSPLAG00000001446	smg7	99	64.772	Poecilia_latipinna
ENSHGLG00100009637	-	96	64.235	ENSPMEG00000005218	smg7	99	64.057	Poecilia_mexicana
ENSHGLG00100009637	-	87	61.919	ENSPREG00000019039	smg7	91	61.957	Poecilia_reticulata
ENSHGLG00100009637	-	100	97.537	ENSPPYG00000000427	SMG7	100	97.537	Pongo_abelii
ENSHGLG00100009637	-	96	84.686	ENSPCAG00000008360	SMG7	94	84.686	Procavia_capensis
ENSHGLG00100009637	-	100	95.633	ENSPCOG00000011996	SMG7	100	93.580	Propithecus_coquereli
ENSHGLG00100009637	-	92	89.320	ENSPVAG00000000851	SMG7	88	89.320	Pteropus_vampyrus
ENSHGLG00100009637	-	99	65.808	ENSPNYG00000007643	smg7	99	66.094	Pundamilia_nyererei
ENSHGLG00100009637	-	99	67.848	ENSPNAG00000011374	smg7	99	67.675	Pygocentrus_nattereri
ENSHGLG00100009637	-	100	94.728	ENSRNOG00000027962	Smg7	100	94.728	Rattus_norvegicus
ENSHGLG00100009637	-	100	97.361	ENSRBIG00000036316	SMG7	100	97.361	Rhinopithecus_bieti
ENSHGLG00100009637	-	100	97.361	ENSRROG00000035719	SMG7	100	97.361	Rhinopithecus_roxellana
ENSHGLG00100009637	-	100	95.187	ENSSBOG00000023454	SMG7	98	95.187	Saimiri_boliviensis_boliviensis
ENSHGLG00100009637	-	100	92.537	ENSSHAG00000013147	SMG7	100	92.274	Sarcophilus_harrisii
ENSHGLG00100009637	-	99	69.023	ENSSFOG00015017252	smg7	99	75.661	Scleropages_formosus
ENSHGLG00100009637	-	99	65.833	ENSSMAG00000006067	smg7	99	65.805	Scophthalmus_maximus
ENSHGLG00100009637	-	96	68.829	ENSSDUG00000017543	smg7	99	65.934	Seriola_dumerili
ENSHGLG00100009637	-	99	89.399	ENSSPUG00000002064	SMG7	99	89.223	Sphenodon_punctatus
ENSHGLG00100009637	-	100	65.889	ENSSPAG00000008733	smg7	100	65.805	Stegastes_partitus
ENSHGLG00100009637	-	100	95.187	ENSSSCG00000015558	SMG7	98	95.187	Sus_scrofa
ENSHGLG00100009637	-	99	88.722	ENSTGUG00000003928	SMG7	100	88.634	Taeniopygia_guttata
ENSHGLG00100009637	-	100	62.309	ENSTNIG00000002802	smg7	98	62.222	Tetraodon_nigroviridis
ENSHGLG00100009637	-	77	94.492	ENSTBEG00000003220	SMG7	74	94.492	Tupaia_belangeri
ENSHGLG00100009637	-	97	94.747	ENSTTRG00000014778	SMG7	93	94.747	Tursiops_truncatus
ENSHGLG00100009637	-	96	92.968	ENSUAMG00000017473	SMG7	100	92.968	Ursus_americanus
ENSHGLG00100009637	-	98	95.268	ENSUMAG00000016389	SMG7	100	95.268	Ursus_maritimus
ENSHGLG00100009637	-	100	95.009	ENSVVUG00000008976	SMG7	98	95.009	Vulpes_vulpes
ENSHGLG00100009637	-	100	71.169	ENSXETG00000012528	smg7	100	70.945	Xenopus_tropicalis
ENSHGLG00100009637	-	99	64.807	ENSXMAG00000007123	smg7	99	64.979	Xiphophorus_maculatus