EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100009807 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 51785 bases
Position: chrJH168610.1:194372-246156
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100013245	Rif1_N	PF12231.8	1.2e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100013397	RIF1-201	7463	-	ENSHGLP00100013245	2322 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100009807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100009807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100009807	RIF1	99	75.767	ENSG00000080345	RIF1	97	87.470	Homo_sapiens
ENSHGLG00100009807	RIF1	99	74.766	ENSAMEG00000008461	RIF1	95	74.766	Ailuropoda_melanoleuca
ENSHGLG00100009807	RIF1	72	50.391	ENSACIG00000017765	rif1	72	50.316	Amphilophus_citrinellus
ENSHGLG00100009807	RIF1	64	49.246	ENSAOCG00000017231	rif1	51	49.216	Amphiprion_ocellaris
ENSHGLG00100009807	RIF1	61	54.424	ENSAPEG00000013228	rif1	52	54.254	Amphiprion_percula
ENSHGLG00100009807	RIF1	71	47.261	ENSATEG00000022887	rif1	62	47.767	Anabas_testudineus
ENSHGLG00100009807	RIF1	87	63.229	ENSAPLG00000007092	RIF1	80	53.120	Anas_platyrhynchos
ENSHGLG00100009807	RIF1	84	59.809	ENSACAG00000003714	RIF1	84	59.809	Anolis_carolinensis
ENSHGLG00100009807	RIF1	99	74.787	ENSANAG00000024840	RIF1	95	74.787	Aotus_nancymaae
ENSHGLG00100009807	RIF1	67	51.820	ENSAMXG00000010910	rif1	59	54.545	Astyanax_mexicanus
ENSHGLG00100009807	RIF1	93	72.698	ENSBTAG00000021020	RIF1	94	72.653	Bos_taurus
ENSHGLG00100009807	RIF1	99	74.308	ENSCJAG00000003138	RIF1	94	74.378	Callithrix_jacchus
ENSHGLG00100009807	RIF1	99	73.617	ENSCAFG00000005670	RIF1	92	73.682	Canis_familiaris
ENSHGLG00100009807	RIF1	99	73.111	ENSCAFG00020016401	RIF1	94	73.177	Canis_lupus_dingo
ENSHGLG00100009807	RIF1	99	73.339	ENSCHIG00000020327	RIF1	94	73.187	Capra_hircus
ENSHGLG00100009807	RIF1	99	71.028	ENSTSYG00000008861	RIF1	94	71.071	Carlito_syrichta
ENSHGLG00100009807	RIF1	78	81.395	ENSCAPG00000008957	RIF1	89	81.395	Cavia_aperea
ENSHGLG00100009807	RIF1	99	80.128	ENSCPOG00000037898	RIF1	94	80.128	Cavia_porcellus
ENSHGLG00100009807	RIF1	99	73.370	ENSCCAG00000024760	RIF1	94	73.413	Cebus_capucinus
ENSHGLG00100009807	RIF1	99	75.320	ENSCATG00000033353	RIF1	95	75.362	Cercocebus_atys
ENSHGLG00100009807	RIF1	96	83.341	ENSCLAG00000001517	RIF1	94	83.341	Chinchilla_lanigera
ENSHGLG00100009807	RIF1	99	75.234	ENSCSAG00000016089	RIF1	95	75.277	Chlorocebus_sabaeus
ENSHGLG00100009807	RIF1	97	75.217	ENSCHOG00000007187	RIF1	91	75.217	Choloepus_hoffmanni
ENSHGLG00100009807	RIF1	88	67.559	ENSCPBG00000025885	RIF1	92	59.567	Chrysemys_picta_bellii
ENSHGLG00100009807	RIF1	99	74.638	ENSCANG00000028962	RIF1	99	75.075	Colobus_angolensis_palliatus
ENSHGLG00100009807	RIF1	99	68.259	ENSCGRG00001024589	Rif1	94	68.273	Cricetulus_griseus_chok1gshd
ENSHGLG00100009807	RIF1	98	69.511	ENSCGRG00000010713	Rif1	94	69.524	Cricetulus_griseus_crigri
ENSHGLG00100009807	RIF1	64	50.943	ENSCSEG00000003945	rif1	64	50.943	Cynoglossus_semilaevis
ENSHGLG00100009807	RIF1	62	52.174	ENSCVAG00000022479	rif1	60	52.174	Cyprinodon_variegatus
ENSHGLG00100009807	RIF1	99	72.329	ENSDNOG00000011194	RIF1	92	72.329	Dasypus_novemcinctus
ENSHGLG00100009807	RIF1	94	70.628	ENSETEG00000012421	RIF1	86	70.628	Echinops_telfairi
ENSHGLG00100009807	RIF1	95	93.667	ENSEASG00005023434	RIF1	96	93.667	Equus_asinus_asinus
ENSHGLG00100009807	RIF1	96	89.426	ENSECAG00000012679	RIF1	94	89.426	Equus_caballus
ENSHGLG00100009807	RIF1	62	51.276	ENSELUG00000006826	rif1	50	51.237	Esox_lucius
ENSHGLG00100009807	RIF1	99	73.991	ENSFCAG00000029742	RIF1	95	73.695	Felis_catus
ENSHGLG00100009807	RIF1	77	60.377	ENSFALG00000013874	RIF1	86	60.377	Ficedula_albicollis
ENSHGLG00100009807	RIF1	99	89.836	ENSFDAG00000006538	RIF1	94	89.836	Fukomys_damarensis
ENSHGLG00100009807	RIF1	61	50.041	ENSFHEG00000013721	rif1	60	48.580	Fundulus_heteroclitus
ENSHGLG00100009807	RIF1	59	48.670	ENSGMOG00000003517	rif1	84	48.670	Gadus_morhua
ENSHGLG00100009807	RIF1	76	66.829	ENSGALG00000012484	RIF1	84	67.317	Gallus_gallus
ENSHGLG00100009807	RIF1	62	54.757	ENSGAFG00000017196	rif1	63	54.614	Gambusia_affinis
ENSHGLG00100009807	RIF1	61	49.674	ENSGACG00000008579	rif1	63	49.474	Gasterosteus_aculeatus
ENSHGLG00100009807	RIF1	88	71.144	ENSGAGG00000012595	RIF1	90	74.112	Gopherus_agassizii
ENSHGLG00100009807	RIF1	89	88.714	ENSGGOG00000040178	RIF1	91	88.714	Gorilla_gorilla
ENSHGLG00100009807	RIF1	85	45.346	ENSHBUG00000007125	rif1	74	50.500	Haplochromis_burtoni
ENSHGLG00100009807	RIF1	63	49.767	ENSHCOG00000015943	rif1	54	49.767	Hippocampus_comes
ENSHGLG00100009807	RIF1	62	52.791	ENSIPUG00000021703	rif1	59	52.640	Ictalurus_punctatus
ENSHGLG00100009807	RIF1	99	75.552	ENSSTOG00000020712	RIF1	95	75.499	Ictidomys_tridecemlineatus
ENSHGLG00100009807	RIF1	99	67.578	ENSJJAG00000023000	Rif1	94	67.848	Jaculus_jaculus
ENSHGLG00100009807	RIF1	62	49.960	ENSKMAG00000002852	rif1	60	49.840	Kryptolebias_marmoratus
ENSHGLG00100009807	RIF1	63	50.353	ENSLBEG00000023196	rif1	54	50.198	Labrus_bergylta
ENSHGLG00100009807	RIF1	85	65.500	ENSLACG00000005425	RIF1	84	65.500	Latimeria_chalumnae
ENSHGLG00100009807	RIF1	82	55.495	ENSLOCG00000002657	rif1	78	55.435	Lepisosteus_oculatus
ENSHGLG00100009807	RIF1	99	73.072	ENSLAFG00000009796	RIF1	95	73.072	Loxodonta_africana
ENSHGLG00100009807	RIF1	99	75.405	ENSMFAG00000032233	RIF1	95	75.448	Macaca_fascicularis
ENSHGLG00100009807	RIF1	99	75.362	ENSMMUG00000008611	RIF1	95	75.405	Macaca_mulatta
ENSHGLG00100009807	RIF1	99	75.277	ENSMNEG00000031616	RIF1	95	75.320	Macaca_nemestrina
ENSHGLG00100009807	RIF1	99	75.320	ENSMLEG00000042945	RIF1	95	75.362	Mandrillus_leucophaeus
ENSHGLG00100009807	RIF1	62	50.490	ENSMAMG00000001745	rif1	59	50.490	Mastacembelus_armatus
ENSHGLG00100009807	RIF1	65	51.268	ENSMZEG00005020920	rif1	66	51.084	Maylandia_zebra
ENSHGLG00100009807	RIF1	83	66.176	ENSMGAG00000012732	RIF1	85	66.667	Meleagris_gallopavo
ENSHGLG00100009807	RIF1	97	89.694	ENSMAUG00000013158	Rif1	94	89.694	Mesocricetus_auratus
ENSHGLG00100009807	RIF1	99	77.381	ENSMICG00000046127	RIF1	95	77.551	Microcebus_murinus
ENSHGLG00100009807	RIF1	99	68.094	ENSMOCG00000009381	Rif1	94	67.966	Microtus_ochrogaster
ENSHGLG00100009807	RIF1	61	54.945	ENSMMOG00000006519	rif1	58	54.945	Mola_mola
ENSHGLG00100009807	RIF1	99	57.318	ENSMODG00000003703	RIF1	94	57.422	Monodelphis_domestica
ENSHGLG00100009807	RIF1	64	48.040	ENSMALG00000016759	rif1	68	48.096	Monopterus_albus
ENSHGLG00100009807	RIF1	99	67.636	MGP_CAROLIEiJ_G0023555	Rif1	94	67.764	Mus_caroli
ENSHGLG00100009807	RIF1	99	68.072	ENSMUSG00000036202	Rif1	94	68.157	Mus_musculus
ENSHGLG00100009807	RIF1	99	66.852	MGP_PahariEiJ_G0025006	Rif1	94	66.724	Mus_pahari
ENSHGLG00100009807	RIF1	99	68.091	MGP_SPRETEiJ_G0024476	Rif1	94	68.390	Mus_spretus
ENSHGLG00100009807	RIF1	99	74.213	ENSMPUG00000000371	RIF1	95	74.213	Mustela_putorius_furo
ENSHGLG00100009807	RIF1	89	71.306	ENSMLUG00000003376	RIF1	94	71.306	Myotis_lucifugus
ENSHGLG00100009807	RIF1	99	71.569	ENSNGAG00000009268	Rif1	94	71.697	Nannospalax_galili
ENSHGLG00100009807	RIF1	70	51.571	ENSNBRG00000014257	rif1	76	49.656	Neolamprologus_brichardi
ENSHGLG00100009807	RIF1	99	73.664	ENSNLEG00000010955	RIF1	95	73.749	Nomascus_leucogenys
ENSHGLG00100009807	RIF1	74	77.130	ENSMEUG00000007601	-	77	77.130	Notamacropus_eugenii
ENSHGLG00100009807	RIF1	99	81.346	ENSODEG00000003950	RIF1	94	81.346	Octodon_degus
ENSHGLG00100009807	RIF1	67	50.038	ENSONIG00000013657	rif1	73	49.962	Oreochromis_niloticus
ENSHGLG00100009807	RIF1	75	77.305	ENSOANG00000006078	-	74	77.305	Ornithorhynchus_anatinus
ENSHGLG00100009807	RIF1	99	73.100	ENSOCUG00000017435	RIF1	95	73.228	Oryctolagus_cuniculus
ENSHGLG00100009807	RIF1	63	48.649	ENSORLG00020001302	rif1	63	48.794	Oryzias_latipes_hni
ENSHGLG00100009807	RIF1	61	50.276	ENSORLG00015000009	rif1	60	50.276	Oryzias_latipes_hsok
ENSHGLG00100009807	RIF1	60	51.111	ENSOMEG00000021513	rif1	60	51.111	Oryzias_melastigma
ENSHGLG00100009807	RIF1	99	74.181	ENSOGAG00000006141	RIF1	95	74.181	Otolemur_garnettii
ENSHGLG00100009807	RIF1	99	73.861	ENSOARG00000008930	RIF1	94	73.714	Ovis_aries
ENSHGLG00100009807	RIF1	99	75.564	ENSPPAG00000023754	RIF1	95	75.649	Pan_paniscus
ENSHGLG00100009807	RIF1	99	73.780	ENSPPRG00000003618	RIF1	95	73.704	Panthera_pardus
ENSHGLG00100009807	RIF1	99	73.865	ENSPTIG00000020652	RIF1	95	73.664	Panthera_tigris_altaica
ENSHGLG00100009807	RIF1	99	75.521	ENSPTRG00000012534	RIF1	95	75.607	Pan_troglodytes
ENSHGLG00100009807	RIF1	99	75.192	ENSPANG00000008525	RIF1	95	75.234	Papio_anubis
ENSHGLG00100009807	RIF1	61	50.549	ENSPMGG00000016141	rif1	69	50.549	Periophthalmus_magnuspinnatus
ENSHGLG00100009807	RIF1	98	69.983	ENSPEMG00000000446	Rif1	94	69.765	Peromyscus_maniculatus_bairdii
ENSHGLG00100009807	RIF1	99	57.288	ENSPCIG00000009185	RIF1	94	57.403	Phascolarctos_cinereus
ENSHGLG00100009807	RIF1	54	51.538	ENSPFOG00000000554	-	64	51.538	Poecilia_formosa
ENSHGLG00100009807	RIF1	61	51.412	ENSPFOG00000017804	rif1	65	51.347	Poecilia_formosa
ENSHGLG00100009807	RIF1	62	50.357	ENSPLAG00000017945	rif1	69	50.201	Poecilia_latipinna
ENSHGLG00100009807	RIF1	51	49.508	ENSPMEG00000006897	-	61	49.508	Poecilia_mexicana
ENSHGLG00100009807	RIF1	62	49.253	ENSPREG00000018052	rif1	59	53.986	Poecilia_reticulata
ENSHGLG00100009807	RIF1	99	75.511	ENSPPYG00000012846	RIF1	95	75.596	Pongo_abelii
ENSHGLG00100009807	RIF1	82	82.524	ENSPCAG00000009032	RIF1	77	82.524	Procavia_capensis
ENSHGLG00100009807	RIF1	99	77.031	ENSPCOG00000027888	RIF1	95	77.221	Propithecus_coquereli
ENSHGLG00100009807	RIF1	95	86.207	ENSPVAG00000014276	RIF1	93	86.207	Pteropus_vampyrus
ENSHGLG00100009807	RIF1	73	48.998	ENSPNYG00000012940	rif1	65	48.798	Pundamilia_nyererei
ENSHGLG00100009807	RIF1	99	66.965	ENSRNOG00000054901	Rif1	94	67.150	Rattus_norvegicus
ENSHGLG00100009807	RIF1	99	73.700	ENSRBIG00000003704	RIF1	94	74.180	Rhinopithecus_bieti
ENSHGLG00100009807	RIF1	99	74.766	ENSRROG00000028206	RIF1	95	75.202	Rhinopithecus_roxellana
ENSHGLG00100009807	RIF1	93	73.498	ENSSBOG00000029530	RIF1	91	73.498	Saimiri_boliviensis_boliviensis
ENSHGLG00100009807	RIF1	99	57.416	ENSSHAG00000018552	RIF1	94	57.331	Sarcophilus_harrisii
ENSHGLG00100009807	RIF1	63	55.249	ENSSFOG00015021539	rif1	68	51.708	Scleropages_formosus
ENSHGLG00100009807	RIF1	62	50.754	ENSSMAG00000011704	rif1	57	50.754	Scophthalmus_maximus
ENSHGLG00100009807	RIF1	61	51.759	ENSSDUG00000015632	rif1	64	51.759	Seriola_dumerili
ENSHGLG00100009807	RIF1	53	51.445	ENSSLDG00000019531	rif1	50	50.394	Seriola_lalandi_dorsalis
ENSHGLG00100009807	RIF1	61	82.500	ENSSARG00000007161	-	58	82.500	Sorex_araneus
ENSHGLG00100009807	RIF1	82	71.154	ENSSPUG00000003062	RIF1	85	71.154	Sphenodon_punctatus
ENSHGLG00100009807	RIF1	99	74.340	ENSSSCG00000016395	RIF1	95	74.383	Sus_scrofa
ENSHGLG00100009807	RIF1	61	50.603	ENSTRUG00000015808	rif1	62	50.000	Takifugu_rubripes
ENSHGLG00100009807	RIF1	62	51.196	ENSTNIG00000011538	rif1	62	51.196	Tetraodon_nigroviridis
ENSHGLG00100009807	RIF1	80	72.057	ENSTBEG00000016082	RIF1	76	72.057	Tupaia_belangeri
ENSHGLG00100009807	RIF1	99	74.883	ENSTTRG00000011190	RIF1	95	74.883	Tursiops_truncatus
ENSHGLG00100009807	RIF1	90	73.248	ENSUAMG00000026385	RIF1	94	73.248	Ursus_americanus
ENSHGLG00100009807	RIF1	99	74.904	ENSUMAG00000000337	RIF1	95	74.904	Ursus_maritimus
ENSHGLG00100009807	RIF1	99	73.049	ENSVPAG00000002162	RIF1	94	73.083	Vicugna_pacos
ENSHGLG00100009807	RIF1	99	73.615	ENSVVUG00000011293	RIF1	94	73.615	Vulpes_vulpes
ENSHGLG00100009807	RIF1	61	48.726	ENSXMAG00000000506	rif1	59	48.792	Xiphophorus_maculatus