EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100010027 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 15437 bases
Position: chrJH169316.1:2049631-2065067
Accession: 101707817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100013561	zf-U11-48K	PF05253.12	8.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100013716	-	2330	-	ENSHGLP00100013561	339 (aa)	XP_021116341	G5BAT5

Gene Model

Click here to download ENSHGLG00100010027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100010027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100010027	SNRNP48	100	91.445	ENSG00000168566	SNRNP48	99	91.716	Homo_sapiens
ENSHGLG00100010027	SNRNP48	81	46.996	ENSAPOG00000021430	snrnp48	83	46.713	Acanthochromis_polyacanthus
ENSHGLG00100010027	SNRNP48	99	86.455	ENSAMEG00000017349	SNRNP48	100	86.455	Ailuropoda_melanoleuca
ENSHGLG00100010027	SNRNP48	88	45.695	ENSACIG00000002032	snrnp48	82	46.127	Amphilophus_citrinellus
ENSHGLG00100010027	SNRNP48	81	46.996	ENSAOCG00000010562	snrnp48	96	42.075	Amphiprion_ocellaris
ENSHGLG00100010027	SNRNP48	81	47.331	ENSAPEG00000003231	snrnp48	96	42.319	Amphiprion_percula
ENSHGLG00100010027	SNRNP48	77	50.000	ENSATEG00000020210	snrnp48	81	49.643	Anabas_testudineus
ENSHGLG00100010027	SNRNP48	85	62.416	ENSACAG00000002811	SNRNP48	91	62.416	Anolis_carolinensis
ENSHGLG00100010027	SNRNP48	100	90.855	ENSANAG00000033538	SNRNP48	99	91.124	Aotus_nancymaae
ENSHGLG00100010027	SNRNP48	94	44.615	ENSAMXG00000015309	snrnp48	85	46.181	Astyanax_mexicanus
ENSHGLG00100010027	SNRNP48	100	85.294	ENSBTAG00000001123	SNRNP48	99	85.841	Bos_taurus
ENSHGLG00100010027	SNRNP48	100	90.855	ENSCJAG00000021330	SNRNP48	99	91.124	Callithrix_jacchus
ENSHGLG00100010027	SNRNP48	99	88.657	ENSCAFG00000009574	SNRNP48	83	88.657	Canis_familiaris
ENSHGLG00100010027	SNRNP48	99	88.690	ENSCAFG00020013203	SNRNP48	99	88.955	Canis_lupus_dingo
ENSHGLG00100010027	SNRNP48	99	87.316	ENSCHIG00000015216	SNRNP48	99	87.611	Capra_hircus
ENSHGLG00100010027	SNRNP48	99	90.533	ENSTSYG00000000698	SNRNP48	99	90.533	Carlito_syrichta
ENSHGLG00100010027	SNRNP48	91	89.286	ENSCAPG00000006768	SNRNP48	99	89.577	Cavia_aperea
ENSHGLG00100010027	SNRNP48	100	94.100	ENSCPOG00000007910	SNRNP48	99	94.379	Cavia_porcellus
ENSHGLG00100010027	SNRNP48	100	89.381	ENSCCAG00000035652	SNRNP48	99	89.645	Cebus_capucinus
ENSHGLG00100010027	SNRNP48	100	91.150	ENSCATG00000033947	SNRNP48	99	91.420	Cercocebus_atys
ENSHGLG00100010027	SNRNP48	100	94.690	ENSCLAG00000003765	SNRNP48	99	94.970	Chinchilla_lanigera
ENSHGLG00100010027	SNRNP48	100	91.445	ENSCSAG00000007409	SNRNP48	99	91.716	Chlorocebus_sabaeus
ENSHGLG00100010027	SNRNP48	85	63.245	ENSCPBG00000019146	SNRNP48	92	63.245	Chrysemys_picta_bellii
ENSHGLG00100010027	SNRNP48	94	30.982	ENSCING00000004121	-	70	33.198	Ciona_intestinalis
ENSHGLG00100010027	SNRNP48	100	91.445	ENSCANG00000030017	SNRNP48	99	91.716	Colobus_angolensis_palliatus
ENSHGLG00100010027	SNRNP48	100	86.431	ENSCGRG00001001076	-	99	85.799	Cricetulus_griseus_chok1gshd
ENSHGLG00100010027	SNRNP48	99	68.955	ENSCGRG00001008805	-	95	68.358	Cricetulus_griseus_chok1gshd
ENSHGLG00100010027	SNRNP48	100	86.431	ENSCGRG00000007781	Snrnp48	99	85.799	Cricetulus_griseus_crigri
ENSHGLG00100010027	SNRNP48	75	48.828	ENSCSEG00000000722	snrnp48	70	48.828	Cynoglossus_semilaevis
ENSHGLG00100010027	SNRNP48	88	46.580	ENSCVAG00000019829	snrnp48	73	47.569	Cyprinodon_variegatus
ENSHGLG00100010027	SNRNP48	81	45.423	ENSDARG00000039989	snrnp48	83	45.172	Danio_rerio
ENSHGLG00100010027	SNRNP48	100	87.059	ENSDNOG00000014978	SNRNP48	99	87.316	Dasypus_novemcinctus
ENSHGLG00100010027	SNRNP48	100	89.118	ENSDORG00000015140	Snrnp48	100	89.118	Dipodomys_ordii
ENSHGLG00100010027	SNRNP48	100	90.265	ENSEASG00005012021	SNRNP48	100	90.265	Equus_asinus_asinus
ENSHGLG00100010027	SNRNP48	100	90.560	ENSECAG00000026937	SNRNP48	99	90.828	Equus_caballus
ENSHGLG00100010027	SNRNP48	100	67.647	ENSEEUG00000015437	SNRNP48	99	67.353	Erinaceus_europaeus
ENSHGLG00100010027	SNRNP48	90	46.178	ENSELUG00000009766	snrnp48	80	46.918	Esox_lucius
ENSHGLG00100010027	SNRNP48	100	89.381	ENSFCAG00000018853	SNRNP48	99	89.645	Felis_catus
ENSHGLG00100010027	SNRNP48	86	64.026	ENSFALG00000007797	SNRNP48	93	65.411	Ficedula_albicollis
ENSHGLG00100010027	SNRNP48	100	94.985	ENSFDAG00000009231	SNRNP48	100	94.985	Fukomys_damarensis
ENSHGLG00100010027	SNRNP48	59	54.455	ENSFHEG00000014647	snrnp48	97	44.781	Fundulus_heteroclitus
ENSHGLG00100010027	SNRNP48	73	45.968	ENSGMOG00000018599	-	87	44.755	Gadus_morhua
ENSHGLG00100010027	SNRNP48	77	68.266	ENSGALG00000013005	SNRNP48	83	69.512	Gallus_gallus
ENSHGLG00100010027	SNRNP48	73	49.609	ENSGAFG00000021639	snrnp48	80	46.690	Gambusia_affinis
ENSHGLG00100010027	SNRNP48	71	49.174	ENSGACG00000017756	-	84	46.690	Gasterosteus_aculeatus
ENSHGLG00100010027	SNRNP48	83	62.752	ENSGAGG00000000865	SNRNP48	97	62.752	Gopherus_agassizii
ENSHGLG00100010027	SNRNP48	100	91.445	ENSGGOG00000013220	SNRNP48	99	91.716	Gorilla_gorilla
ENSHGLG00100010027	SNRNP48	76	47.510	ENSHBUG00000017066	snrnp48	83	45.578	Haplochromis_burtoni
ENSHGLG00100010027	SNRNP48	100	100.000	ENSHGLG00000015241	SNRNP48	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100010027	SNRNP48	72	47.154	ENSHCOG00000014066	snrnp48	81	44.755	Hippocampus_comes
ENSHGLG00100010027	SNRNP48	100	92.920	ENSSTOG00000014635	SNRNP48	99	95.960	Ictidomys_tridecemlineatus
ENSHGLG00100010027	SNRNP48	99	84.024	ENSJJAG00000011495	Snrnp48	99	84.024	Jaculus_jaculus
ENSHGLG00100010027	SNRNP48	92	42.492	ENSKMAG00000016514	snrnp48	80	45.196	Kryptolebias_marmoratus
ENSHGLG00100010027	SNRNP48	81	48.387	ENSLBEG00000026249	snrnp48	97	42.493	Labrus_bergylta
ENSHGLG00100010027	SNRNP48	95	53.939	ENSLACG00000003958	SNRNP48	98	52.339	Latimeria_chalumnae
ENSHGLG00100010027	SNRNP48	83	51.211	ENSLOCG00000004187	snrnp48	95	48.665	Lepisosteus_oculatus
ENSHGLG00100010027	SNRNP48	100	86.136	ENSLAFG00000011152	SNRNP48	99	86.391	Loxodonta_africana
ENSHGLG00100010027	SNRNP48	100	91.740	ENSMFAG00000045216	SNRNP48	99	92.012	Macaca_fascicularis
ENSHGLG00100010027	SNRNP48	100	91.740	ENSMMUG00000014785	SNRNP48	99	92.012	Macaca_mulatta
ENSHGLG00100010027	SNRNP48	100	91.445	ENSMNEG00000042269	SNRNP48	99	91.716	Macaca_nemestrina
ENSHGLG00100010027	SNRNP48	100	91.740	ENSMLEG00000034004	SNRNP48	99	92.012	Mandrillus_leucophaeus
ENSHGLG00100010027	SNRNP48	76	46.923	ENSMAMG00000018673	snrnp48	71	46.479	Mastacembelus_armatus
ENSHGLG00100010027	SNRNP48	83	65.306	ENSMGAG00000006037	SNRNP48	99	65.411	Meleagris_gallopavo
ENSHGLG00100010027	SNRNP48	100	87.021	ENSMAUG00000011944	Snrnp48	99	86.391	Mesocricetus_auratus
ENSHGLG00100010027	SNRNP48	100	88.496	ENSMICG00000012497	SNRNP48	99	88.757	Microcebus_murinus
ENSHGLG00100010027	SNRNP48	100	86.726	ENSMOCG00000015555	Snrnp48	99	86.095	Microtus_ochrogaster
ENSHGLG00100010027	SNRNP48	54	51.892	ENSMMOG00000003072	-	58	51.892	Mola_mola
ENSHGLG00100010027	SNRNP48	98	69.767	ENSMODG00000009996	SNRNP48	93	69.767	Monodelphis_domestica
ENSHGLG00100010027	SNRNP48	74	48.819	ENSMALG00000005725	snrnp48	82	46.479	Monopterus_albus
ENSHGLG00100010027	SNRNP48	99	86.982	MGP_CAROLIEiJ_G0018441	Snrnp48	99	86.095	Mus_caroli
ENSHGLG00100010027	SNRNP48	99	86.095	ENSMUSG00000021431	Snrnp48	99	85.207	Mus_musculus
ENSHGLG00100010027	SNRNP48	99	86.095	MGP_PahariEiJ_G0019509	Snrnp48	99	85.207	Mus_pahari
ENSHGLG00100010027	SNRNP48	99	85.503	MGP_SPRETEiJ_G0019321	Snrnp48	99	84.615	Mus_spretus
ENSHGLG00100010027	SNRNP48	99	85.799	ENSNGAG00000004849	Snrnp48	99	85.799	Nannospalax_galili
ENSHGLG00100010027	SNRNP48	98	41.520	ENSNBRG00000012127	snrnp48	97	40.000	Neolamprologus_brichardi
ENSHGLG00100010027	SNRNP48	100	91.740	ENSNLEG00000011667	SNRNP48	99	92.012	Nomascus_leucogenys
ENSHGLG00100010027	SNRNP48	95	79.257	ENSOPRG00000015471	SNRNP48	100	78.947	Ochotona_princeps
ENSHGLG00100010027	SNRNP48	96	43.807	ENSONIG00000001520	snrnp48	84	45.238	Oreochromis_niloticus
ENSHGLG00100010027	SNRNP48	57	61.058	ENSOANG00000019888	-	100	62.500	Ornithorhynchus_anatinus
ENSHGLG00100010027	SNRNP48	84	88.462	ENSOCUG00000005168	SNRNP48	100	87.829	Oryctolagus_cuniculus
ENSHGLG00100010027	SNRNP48	88	46.753	ENSORLG00000015654	snrnp48	82	47.586	Oryzias_latipes
ENSHGLG00100010027	SNRNP48	88	44.805	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSHGLG00100010027	SNRNP48	88	45.779	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSHGLG00100010027	SNRNP48	83	46.181	ENSOMEG00000022007	snrnp48	82	46.875	Oryzias_melastigma
ENSHGLG00100010027	SNRNP48	92	87.460	ENSOGAG00000005275	SNRNP48	96	87.697	Otolemur_garnettii
ENSHGLG00100010027	SNRNP48	84	87.368	ENSOARG00000017319	SNRNP48	99	87.368	Ovis_aries
ENSHGLG00100010027	SNRNP48	100	91.740	ENSPPAG00000032873	SNRNP48	99	92.012	Pan_paniscus
ENSHGLG00100010027	SNRNP48	100	89.676	ENSPPRG00000004283	SNRNP48	99	89.941	Panthera_pardus
ENSHGLG00100010027	SNRNP48	84	90.909	ENSPTIG00000013502	SNRNP48	99	91.228	Panthera_tigris_altaica
ENSHGLG00100010027	SNRNP48	100	91.740	ENSPTRG00000017703	SNRNP48	99	92.012	Pan_troglodytes
ENSHGLG00100010027	SNRNP48	100	91.740	ENSPANG00000000771	SNRNP48	99	92.012	Papio_anubis
ENSHGLG00100010027	SNRNP48	94	44.807	ENSPKIG00000013703	snrnp48	59	48.601	Paramormyrops_kingsleyae
ENSHGLG00100010027	SNRNP48	84	62.876	ENSPSIG00000002213	SNRNP48	94	62.207	Pelodiscus_sinensis
ENSHGLG00100010027	SNRNP48	72	48.178	ENSPMGG00000008120	snrnp48	86	48.178	Periophthalmus_magnuspinnatus
ENSHGLG00100010027	SNRNP48	100	86.726	ENSPEMG00000008872	Snrnp48	99	86.095	Peromyscus_maniculatus_bairdii
ENSHGLG00100010027	SNRNP48	95	43.902	ENSPFOG00000003578	snrnp48	93	43.491	Poecilia_formosa
ENSHGLG00100010027	SNRNP48	67	50.218	ENSPLAG00000002290	snrnp48	77	50.218	Poecilia_latipinna
ENSHGLG00100010027	SNRNP48	95	43.293	ENSPMEG00000018033	snrnp48	93	42.899	Poecilia_mexicana
ENSHGLG00100010027	SNRNP48	72	50.407	ENSPREG00000018541	snrnp48	80	47.872	Poecilia_reticulata
ENSHGLG00100010027	SNRNP48	100	90.265	ENSPPYG00000016209	SNRNP48	99	90.533	Pongo_abelii
ENSHGLG00100010027	SNRNP48	79	69.663	ENSPCAG00000011991	SNRNP48	99	69.663	Procavia_capensis
ENSHGLG00100010027	SNRNP48	100	88.791	ENSPVAG00000002854	SNRNP48	100	88.791	Pteropus_vampyrus
ENSHGLG00100010027	SNRNP48	76	47.893	ENSPNYG00000015399	snrnp48	92	45.918	Pundamilia_nyererei
ENSHGLG00100010027	SNRNP48	99	86.982	ENSRNOG00000013756	Snrnp48	99	86.095	Rattus_norvegicus
ENSHGLG00100010027	SNRNP48	91	90.968	ENSRBIG00000043856	SNRNP48	97	91.447	Rhinopithecus_bieti
ENSHGLG00100010027	SNRNP48	100	91.445	ENSRROG00000043229	SNRNP48	99	91.716	Rhinopithecus_roxellana
ENSHGLG00100010027	SNRNP48	100	90.855	ENSSBOG00000019486	SNRNP48	99	91.124	Saimiri_boliviensis_boliviensis
ENSHGLG00100010027	SNRNP48	98	70.640	ENSSHAG00000014483	SNRNP48	99	70.640	Sarcophilus_harrisii
ENSHGLG00100010027	SNRNP48	73	50.988	ENSSFOG00015006610	snrnp48	69	48.649	Scleropages_formosus
ENSHGLG00100010027	SNRNP48	87	46.128	ENSSDUG00000014953	snrnp48	95	42.433	Seriola_dumerili
ENSHGLG00100010027	SNRNP48	88	46.104	ENSSLDG00000005989	snrnp48	96	41.954	Seriola_lalandi_dorsalis
ENSHGLG00100010027	SNRNP48	98	59.130	ENSSPUG00000006257	SNRNP48	95	59.130	Sphenodon_punctatus
ENSHGLG00100010027	SNRNP48	78	48.175	ENSSPAG00000006454	snrnp48	80	47.500	Stegastes_partitus
ENSHGLG00100010027	SNRNP48	83	64.261	ENSTGUG00000007575	SNRNP48	93	64.261	Taeniopygia_guttata
ENSHGLG00100010027	SNRNP48	73	49.402	ENSTRUG00000007031	snrnp48	82	48.227	Takifugu_rubripes
ENSHGLG00100010027	SNRNP48	91	41.346	ENSTNIG00000012977	-	76	45.312	Tetraodon_nigroviridis
ENSHGLG00100010027	SNRNP48	100	72.861	ENSTBEG00000015620	SNRNP48	99	73.077	Tupaia_belangeri
ENSHGLG00100010027	SNRNP48	100	86.431	ENSTTRG00000016715	SNRNP48	99	86.686	Tursiops_truncatus
ENSHGLG00100010027	SNRNP48	100	89.086	ENSUAMG00000003690	SNRNP48	99	89.349	Ursus_americanus
ENSHGLG00100010027	SNRNP48	84	85.315	ENSVPAG00000003557	SNRNP48	99	85.614	Vicugna_pacos
ENSHGLG00100010027	SNRNP48	99	88.393	ENSVVUG00000004996	SNRNP48	99	88.657	Vulpes_vulpes
ENSHGLG00100010027	SNRNP48	86	53.020	ENSXETG00000020447	snrnp48	97	50.000	Xenopus_tropicalis
ENSHGLG00100010027	SNRNP48	67	49.565	ENSXCOG00000004478	snrnp48	69	49.565	Xiphophorus_couchianus
ENSHGLG00100010027	SNRNP48	82	48.387	ENSXMAG00000013595	snrnp48	81	43.865	Xiphophorus_maculatus