EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100010314 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 31144 bases
Position: chrJH171978.1:372358-403501
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100013939	CMS1	PF14617.6	2.1e-32	1	1
ENSHGLP00100013939	DEAD	PF00270.29	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100014094	CMSS1-201	750	-	ENSHGLP00100013939	249 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100010314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100010314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100010314	CMSS1	100	85.214	ENSG00000184220	CMSS1	99	92.593	Homo_sapiens
ENSHGLG00100010314	CMSS1	81	64.851	ENSAPOG00000010604	cmss1	81	64.500	Acanthochromis_polyacanthus
ENSHGLG00100010314	CMSS1	100	86.822	ENSAMEG00000004092	CMSS1	99	86.822	Ailuropoda_melanoleuca
ENSHGLG00100010314	CMSS1	81	54.455	ENSACIG00000021854	cmss1	74	54.000	Amphilophus_citrinellus
ENSHGLG00100010314	CMSS1	81	64.851	ENSAOCG00000013361	cmss1	69	64.500	Amphiprion_ocellaris
ENSHGLG00100010314	CMSS1	81	64.851	ENSAPEG00000005829	cmss1	69	64.500	Amphiprion_percula
ENSHGLG00100010314	CMSS1	90	62.281	ENSATEG00000008209	cmss1	79	62.174	Anabas_testudineus
ENSHGLG00100010314	CMSS1	91	69.604	ENSAPLG00000010542	CMSS1	99	69.604	Anas_platyrhynchos
ENSHGLG00100010314	CMSS1	99	62.879	ENSACAG00000011065	CMSS1	97	62.879	Anolis_carolinensis
ENSHGLG00100010314	CMSS1	100	83.721	ENSANAG00000023565	CMSS1	98	83.721	Aotus_nancymaae
ENSHGLG00100010314	CMSS1	81	60.891	ENSACLG00000027294	cmss1	69	60.500	Astatotilapia_calliptera
ENSHGLG00100010314	CMSS1	80	55.000	ENSAMXG00000002046	cmss1	68	55.000	Astyanax_mexicanus
ENSHGLG00100010314	CMSS1	97	85.542	ENSBTAG00000013663	CMSS1	93	84.825	Bos_taurus
ENSHGLG00100010314	CMSS1	100	82.946	ENSCJAG00000000610	CMSS1	98	82.946	Callithrix_jacchus
ENSHGLG00100010314	CMSS1	100	87.160	ENSCAFG00000009230	CMSS1	93	87.160	Canis_familiaris
ENSHGLG00100010314	CMSS1	87	87.097	ENSCAFG00020024156	-	68	87.097	Canis_lupus_dingo
ENSHGLG00100010314	CMSS1	100	87.549	ENSCAFG00020009464	-	94	87.549	Canis_lupus_dingo
ENSHGLG00100010314	CMSS1	100	84.825	ENSCHIG00000013003	CMSS1	93	84.825	Capra_hircus
ENSHGLG00100010314	CMSS1	100	83.268	ENSTSYG00000009266	CMSS1	98	83.268	Carlito_syrichta
ENSHGLG00100010314	CMSS1	90	75.983	ENSCAPG00000013584	CMSS1	100	71.368	Cavia_aperea
ENSHGLG00100010314	CMSS1	100	90.272	ENSCPOG00000014680	CMSS1	92	90.272	Cavia_porcellus
ENSHGLG00100010314	CMSS1	100	84.109	ENSCCAG00000034685	CMSS1	98	84.109	Cebus_capucinus
ENSHGLG00100010314	CMSS1	100	85.603	ENSCATG00000031980	CMSS1	98	85.603	Cercocebus_atys
ENSHGLG00100010314	CMSS1	91	94.714	ENSCLAG00000011241	CMSS1	97	94.714	Chinchilla_lanigera
ENSHGLG00100010314	CMSS1	95	87.295	ENSCSAG00000006024	CMSS1	99	87.295	Chlorocebus_sabaeus
ENSHGLG00100010314	CMSS1	100	65.370	ENSCHOG00000012098	CMSS1	93	65.370	Choloepus_hoffmanni
ENSHGLG00100010314	CMSS1	78	39.500	ENSCING00000014848	-	100	40.642	Ciona_intestinalis
ENSHGLG00100010314	CMSS1	50	38.889	ENSCSAVG00000002309	-	99	38.889	Ciona_savignyi
ENSHGLG00100010314	CMSS1	100	85.214	ENSCANG00000031337	CMSS1	98	85.214	Colobus_angolensis_palliatus
ENSHGLG00100010314	CMSS1	100	78.988	ENSCGRG00001014305	Cmss1	92	78.988	Cricetulus_griseus_chok1gshd
ENSHGLG00100010314	CMSS1	100	79.377	ENSCGRG00000006722	Cmss1	99	79.377	Cricetulus_griseus_crigri
ENSHGLG00100010314	CMSS1	89	59.735	ENSCSEG00000004958	cmss1	68	62.000	Cynoglossus_semilaevis
ENSHGLG00100010314	CMSS1	81	60.396	ENSCVAG00000005039	cmss1	69	60.500	Cyprinodon_variegatus
ENSHGLG00100010314	CMSS1	91	52.381	ENSDARG00000112579	cmss1	83	50.413	Danio_rerio
ENSHGLG00100010314	CMSS1	100	84.980	ENSDNOG00000040418	CMSS1	92	84.980	Dasypus_novemcinctus
ENSHGLG00100010314	CMSS1	99	84.766	ENSDORG00000010461	Cmss1	92	84.766	Dipodomys_ordii
ENSHGLG00100010314	CMSS1	53	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSHGLG00100010314	CMSS1	91	92.070	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSHGLG00100010314	CMSS1	100	85.992	ENSECAG00000015662	CMSS1	99	90.708	Equus_caballus
ENSHGLG00100010314	CMSS1	91	60.352	ENSEEUG00000007624	-	81	60.352	Erinaceus_europaeus
ENSHGLG00100010314	CMSS1	81	62.871	ENSELUG00000019459	cmss1	79	59.746	Esox_lucius
ENSHGLG00100010314	CMSS1	100	88.327	ENSFCAG00000044577	CMSS1	92	88.327	Felis_catus
ENSHGLG00100010314	CMSS1	91	67.257	ENSFALG00000005816	CMSS1	95	67.257	Ficedula_albicollis
ENSHGLG00100010314	CMSS1	91	95.595	ENSFDAG00000012577	CMSS1	99	95.595	Fukomys_damarensis
ENSHGLG00100010314	CMSS1	91	60.173	ENSFHEG00000012008	cmss1	95	61.039	Fundulus_heteroclitus
ENSHGLG00100010314	CMSS1	81	62.376	ENSGMOG00000016729	cmss1	72	62.000	Gadus_morhua
ENSHGLG00100010314	CMSS1	91	69.912	ENSGALG00000015267	CMSS1	87	69.912	Gallus_gallus
ENSHGLG00100010314	CMSS1	83	63.285	ENSGAFG00000021217	cmss1	76	62.500	Gambusia_affinis
ENSHGLG00100010314	CMSS1	81	56.931	ENSGACG00000002798	cmss1	72	56.500	Gasterosteus_aculeatus
ENSHGLG00100010314	CMSS1	91	71.681	ENSGAGG00000019861	CMSS1	88	71.681	Gopherus_agassizii
ENSHGLG00100010314	CMSS1	100	85.603	ENSGGOG00000014125	CMSS1	98	85.603	Gorilla_gorilla
ENSHGLG00100010314	CMSS1	81	60.891	ENSHBUG00000008431	cmss1	71	60.500	Haplochromis_burtoni
ENSHGLG00100010314	CMSS1	98	99.592	ENSHGLG00000019481	CMSS1	100	99.592	Heterocephalus_glaber_female
ENSHGLG00100010314	CMSS1	88	63.927	ENSHCOG00000003222	cmss1	74	63.927	Hippocampus_comes
ENSHGLG00100010314	CMSS1	89	57.014	ENSIPUG00000011591	cmss1	76	57.014	Ictalurus_punctatus
ENSHGLG00100010314	CMSS1	100	86.381	ENSSTOG00000019366	CMSS1	92	86.381	Ictidomys_tridecemlineatus
ENSHGLG00100010314	CMSS1	100	81.712	ENSJJAG00000014894	Cmss1	89	89.500	Jaculus_jaculus
ENSHGLG00100010314	CMSS1	81	55.446	ENSKMAG00000002390	cmss1	80	55.000	Kryptolebias_marmoratus
ENSHGLG00100010314	CMSS1	89	53.333	ENSLBEG00000006298	cmss1	82	58.209	Labrus_bergylta
ENSHGLG00100010314	CMSS1	91	66.228	ENSLACG00000009293	CMSS1	99	66.228	Latimeria_chalumnae
ENSHGLG00100010314	CMSS1	91	57.709	ENSLOCG00000009391	cmss1	80	57.709	Lepisosteus_oculatus
ENSHGLG00100010314	CMSS1	91	89.427	ENSLAFG00000017509	CMSS1	99	89.427	Loxodonta_africana
ENSHGLG00100010314	CMSS1	100	85.992	ENSMFAG00000045006	CMSS1	98	85.992	Macaca_fascicularis
ENSHGLG00100010314	CMSS1	100	85.603	ENSMMUG00000002939	CMSS1	96	90.783	Macaca_mulatta
ENSHGLG00100010314	CMSS1	100	85.603	ENSMNEG00000031315	CMSS1	98	85.603	Macaca_nemestrina
ENSHGLG00100010314	CMSS1	100	85.214	ENSMLEG00000033660	CMSS1	98	85.214	Mandrillus_leucophaeus
ENSHGLG00100010314	CMSS1	91	60.870	ENSMAMG00000017176	cmss1	79	60.870	Mastacembelus_armatus
ENSHGLG00100010314	CMSS1	81	60.891	ENSMZEG00005021886	cmss1	69	60.500	Maylandia_zebra
ENSHGLG00100010314	CMSS1	91	69.027	ENSMGAG00000014360	CMSS1	99	69.027	Meleagris_gallopavo
ENSHGLG00100010314	CMSS1	99	56.420	ENSMAUG00000020609	Cmss1	90	56.420	Mesocricetus_auratus
ENSHGLG00100010314	CMSS1	99	86.667	ENSMICG00000048977	CMSS1	98	86.667	Microcebus_murinus
ENSHGLG00100010314	CMSS1	99	80.632	ENSMOCG00000021937	Cmss1	92	80.632	Microtus_ochrogaster
ENSHGLG00100010314	CMSS1	81	62.376	ENSMMOG00000019794	cmss1	83	62.000	Mola_mola
ENSHGLG00100010314	CMSS1	99	71.984	ENSMODG00000002275	CMSS1	97	71.984	Monodelphis_domestica
ENSHGLG00100010314	CMSS1	81	64.851	ENSMALG00000004250	cmss1	69	64.500	Monopterus_albus
ENSHGLG00100010314	CMSS1	99	79.921	MGP_CAROLIEiJ_G0020824	Cmss1	92	79.921	Mus_caroli
ENSHGLG00100010314	CMSS1	99	81.102	ENSMUSG00000022748	Cmss1	92	81.102	Mus_musculus
ENSHGLG00100010314	CMSS1	99	79.528	MGP_PahariEiJ_G0016524	Cmss1	92	79.528	Mus_pahari
ENSHGLG00100010314	CMSS1	99	81.102	MGP_SPRETEiJ_G0021724	Cmss1	92	81.102	Mus_spretus
ENSHGLG00100010314	CMSS1	94	90.535	ENSMPUG00000011324	CMSS1	98	88.281	Mustela_putorius_furo
ENSHGLG00100010314	CMSS1	100	85.328	ENSMLUG00000001131	CMSS1	98	85.328	Myotis_lucifugus
ENSHGLG00100010314	CMSS1	100	82.879	ENSNGAG00000020316	Cmss1	92	82.879	Nannospalax_galili
ENSHGLG00100010314	CMSS1	81	60.396	ENSNBRG00000003095	cmss1	69	60.000	Neolamprologus_brichardi
ENSHGLG00100010314	CMSS1	100	86.770	ENSNLEG00000034172	CMSS1	98	86.770	Nomascus_leucogenys
ENSHGLG00100010314	CMSS1	91	66.079	ENSMEUG00000014505	CMSS1	99	66.079	Notamacropus_eugenii
ENSHGLG00100010314	CMSS1	100	85.214	ENSOPRG00000002986	CMSS1	92	85.214	Ochotona_princeps
ENSHGLG00100010314	CMSS1	100	88.716	ENSODEG00000005226	-	92	88.716	Octodon_degus
ENSHGLG00100010314	CMSS1	99	87.500	ENSODEG00000003558	-	91	87.500	Octodon_degus
ENSHGLG00100010314	CMSS1	100	75.502	ENSODEG00000009446	-	93	75.502	Octodon_degus
ENSHGLG00100010314	CMSS1	100	77.043	ENSODEG00000001853	-	92	77.043	Octodon_degus
ENSHGLG00100010314	CMSS1	81	60.891	ENSONIG00000006678	cmss1	77	60.500	Oreochromis_niloticus
ENSHGLG00100010314	CMSS1	99	70.817	ENSOANG00000007529	CMSS1	99	74.459	Ornithorhynchus_anatinus
ENSHGLG00100010314	CMSS1	100	84.436	ENSOCUG00000025366	CMSS1	93	84.436	Oryctolagus_cuniculus
ENSHGLG00100010314	CMSS1	96	58.750	ENSORLG00000020340	cmss1	82	59.583	Oryzias_latipes
ENSHGLG00100010314	CMSS1	87	57.870	ENSORLG00020012235	cmss1	85	58.000	Oryzias_latipes_hni
ENSHGLG00100010314	CMSS1	81	57.921	ENSORLG00015015551	cmss1	75	57.500	Oryzias_latipes_hsok
ENSHGLG00100010314	CMSS1	81	64.851	ENSOMEG00000012555	cmss1	69	64.500	Oryzias_melastigma
ENSHGLG00100010314	CMSS1	91	91.189	ENSOGAG00000002045	CMSS1	99	91.189	Otolemur_garnettii
ENSHGLG00100010314	CMSS1	100	84.884	ENSOARG00000017899	CMSS1	89	84.884	Ovis_aries
ENSHGLG00100010314	CMSS1	100	85.603	ENSPPAG00000038515	CMSS1	94	85.603	Pan_paniscus
ENSHGLG00100010314	CMSS1	100	88.327	ENSPPRG00000016767	CMSS1	92	88.327	Panthera_pardus
ENSHGLG00100010314	CMSS1	100	87.549	ENSPTIG00000018274	CMSS1	92	87.549	Panthera_tigris_altaica
ENSHGLG00100010314	CMSS1	100	84.825	ENSPTRG00000015157	CMSS1	99	86.475	Pan_troglodytes
ENSHGLG00100010314	CMSS1	100	86.747	ENSPANG00000019980	CMSS1	99	86.747	Papio_anubis
ENSHGLG00100010314	CMSS1	91	62.174	ENSPKIG00000012609	cmss1	85	62.338	Paramormyrops_kingsleyae
ENSHGLG00100010314	CMSS1	91	73.009	ENSPSIG00000003849	CMSS1	99	73.009	Pelodiscus_sinensis
ENSHGLG00100010314	CMSS1	81	62.562	ENSPMGG00000010286	cmss1	86	62.189	Periophthalmus_magnuspinnatus
ENSHGLG00100010314	CMSS1	99	80.078	ENSPEMG00000016384	Cmss1	91	80.078	Peromyscus_maniculatus_bairdii
ENSHGLG00100010314	CMSS1	82	52.451	ENSPMAG00000001146	cmss1	98	52.500	Petromyzon_marinus
ENSHGLG00100010314	CMSS1	96	72.874	ENSPCIG00000015656	CMSS1	93	73.171	Phascolarctos_cinereus
ENSHGLG00100010314	CMSS1	90	59.565	ENSPFOG00000016849	cmss1	70	62.000	Poecilia_formosa
ENSHGLG00100010314	CMSS1	90	59.130	ENSPLAG00000008323	cmss1	70	61.500	Poecilia_latipinna
ENSHGLG00100010314	CMSS1	90	59.565	ENSPMEG00000021020	cmss1	69	62.000	Poecilia_mexicana
ENSHGLG00100010314	CMSS1	91	59.483	ENSPREG00000007618	cmss1	68	61.500	Poecilia_reticulata
ENSHGLG00100010314	CMSS1	100	84.825	ENSPPYG00000013606	CMSS1	94	84.825	Pongo_abelii
ENSHGLG00100010314	CMSS1	99	87.059	ENSPCOG00000020035	CMSS1	98	87.059	Propithecus_coquereli
ENSHGLG00100010314	CMSS1	100	73.541	ENSPVAG00000017031	CMSS1	92	73.541	Pteropus_vampyrus
ENSHGLG00100010314	CMSS1	71	63.636	ENSPNYG00000013428	cmss1	64	63.218	Pundamilia_nyererei
ENSHGLG00100010314	CMSS1	91	53.680	ENSPNAG00000007912	cmss1	79	54.978	Pygocentrus_nattereri
ENSHGLG00100010314	CMSS1	99	79.921	ENSRNOG00000027888	Cmss1	99	79.921	Rattus_norvegicus
ENSHGLG00100010314	CMSS1	100	85.603	ENSRBIG00000037931	CMSS1	98	85.603	Rhinopithecus_bieti
ENSHGLG00100010314	CMSS1	100	85.603	ENSRROG00000042910	CMSS1	98	85.603	Rhinopithecus_roxellana
ENSHGLG00100010314	CMSS1	100	83.721	ENSSBOG00000030980	CMSS1	98	83.721	Saimiri_boliviensis_boliviensis
ENSHGLG00100010314	CMSS1	96	72.222	ENSSHAG00000009321	CMSS1	99	72.222	Sarcophilus_harrisii
ENSHGLG00100010314	CMSS1	91	60.870	ENSSFOG00015001509	cmss1	80	61.039	Scleropages_formosus
ENSHGLG00100010314	CMSS1	89	62.832	ENSSMAG00000001653	cmss1	69	63.500	Scophthalmus_maximus
ENSHGLG00100010314	CMSS1	91	61.572	ENSSDUG00000007719	cmss1	80	61.572	Seriola_dumerili
ENSHGLG00100010314	CMSS1	83	65.217	ENSSLDG00000012300	cmss1	75	60.000	Seriola_lalandi_dorsalis
ENSHGLG00100010314	CMSS1	100	70.039	ENSSARG00000003584	CMSS1	92	70.039	Sorex_araneus
ENSHGLG00100010314	CMSS1	91	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSHGLG00100010314	CMSS1	83	64.563	ENSSPAG00000019182	cmss1	62	64.000	Stegastes_partitus
ENSHGLG00100010314	CMSS1	100	87.549	ENSSSCG00000011970	CMSS1	92	87.549	Sus_scrofa
ENSHGLG00100010314	CMSS1	91	66.814	ENSTGUG00000013635	CMSS1	99	66.814	Taeniopygia_guttata
ENSHGLG00100010314	CMSS1	81	62.376	ENSTRUG00000015265	cmss1	71	62.000	Takifugu_rubripes
ENSHGLG00100010314	CMSS1	81	56.436	ENSTNIG00000002880	cmss1	72	56.000	Tetraodon_nigroviridis
ENSHGLG00100010314	CMSS1	91	69.469	ENSTBEG00000016722	CMSS1	81	69.469	Tupaia_belangeri
ENSHGLG00100010314	CMSS1	100	84.047	ENSTTRG00000001562	CMSS1	92	84.047	Tursiops_truncatus
ENSHGLG00100010314	CMSS1	100	88.327	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSHGLG00100010314	CMSS1	100	87.549	ENSUMAG00000001983	CMSS1	99	87.549	Ursus_maritimus
ENSHGLG00100010314	CMSS1	91	74.890	ENSVPAG00000000263	CMSS1	81	74.890	Vicugna_pacos
ENSHGLG00100010314	CMSS1	87	91.705	ENSVVUG00000007776	-	85	91.705	Vulpes_vulpes
ENSHGLG00100010314	CMSS1	96	88.618	ENSVVUG00000021647	-	100	88.618	Vulpes_vulpes
ENSHGLG00100010314	CMSS1	91	63.319	ENSXETG00000011858	cmss1	89	59.919	Xenopus_tropicalis
ENSHGLG00100010314	CMSS1	84	62.500	ENSXCOG00000018724	cmss1	68	62.000	Xiphophorus_couchianus
ENSHGLG00100010314	CMSS1	84	62.500	ENSXMAG00000011243	cmss1	75	62.000	Xiphophorus_maculatus