EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100010496 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 177203 bases
Position: chrJH173677.1:413379-590581
Accession: 101706423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100014201	ResIII	PF04851.15	2e-08	1	1
ENSHGLP00100014199	ResIII	PF04851.15	2e-08	1	1
ENSHGLP00100014200	ResIII	PF04851.15	2.1e-08	1	1
ENSHGLP00100014198	ResIII	PF04851.15	2.1e-08	1	1
ENSHGLP00100014200	BRK	PF07533.16	2.1e-17	1	1
ENSHGLP00100014198	BRK	PF07533.16	2.2e-17	1	1
ENSHGLP00100014201	BRK	PF07533.16	2.2e-17	1	1
ENSHGLP00100014199	BRK	PF07533.16	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100014362	SMARCA2-207	783	-	ENSHGLP00100014204	260 (aa)	-	-
ENSHGLT00100014360	SMARCA2-205	4347	-	ENSHGLP00100014202	276 (aa)	XP_012925140	UPI0006574900
ENSHGLT00100014361	SMARCA2-206	4102	-	ENSHGLP00100014203	277 (aa)	-	-
ENSHGLT00100014357	SMARCA2-202	4635	-	ENSHGLP00100014199	1544 (aa)	-	-
ENSHGLT00100014356	SMARCA2-201	4689	-	ENSHGLP00100014198	1562 (aa)	-	-
ENSHGLT00100014359	SMARCA2-204	4626	-	ENSHGLP00100014201	1541 (aa)	-	-
ENSHGLT00100014358	SMARCA2-203	4674	-	ENSHGLP00100014200	1557 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100010496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100010496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100010496	SMARCA2	92	81.118	ENSHGLG00100013774	SMARCA4	98	73.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100010496	SMARCA2	100	95.931	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSHGLG00100010496	SMARCA2	100	80.214	ENSAPOG00000002641	SMARCA2	97	80.619	Acanthochromis_polyacanthus
ENSHGLG00100010496	SMARCA2	82	99.296	ENSAMEG00000012325	SMARCA2	100	99.296	Ailuropoda_melanoleuca
ENSHGLG00100010496	SMARCA2	100	80.520	ENSACIG00000015607	SMARCA2	97	80.469	Amphilophus_citrinellus
ENSHGLG00100010496	SMARCA2	100	80.113	ENSAOCG00000009647	-	97	80.754	Amphiprion_ocellaris
ENSHGLG00100010496	SMARCA2	100	80.276	ENSAPEG00000007646	SMARCA2	96	81.509	Amphiprion_percula
ENSHGLG00100010496	SMARCA2	99	80.713	ENSATEG00000006916	SMARCA2	96	80.921	Anabas_testudineus
ENSHGLG00100010496	SMARCA2	89	89.530	ENSAPLG00000013873	SMARCA2	94	88.039	Anas_platyrhynchos
ENSHGLG00100010496	SMARCA2	100	90.333	ENSACAG00000002423	SMARCA2	100	89.757	Anolis_carolinensis
ENSHGLG00100010496	SMARCA2	100	96.178	ENSANAG00000026498	SMARCA2	100	96.178	Aotus_nancymaae
ENSHGLG00100010496	SMARCA2	100	81.807	ENSACLG00000004248	SMARCA2	97	81.591	Astatotilapia_calliptera
ENSHGLG00100010496	SMARCA2	100	81.990	ENSAMXG00000012404	smarca2	97	82.334	Astyanax_mexicanus
ENSHGLG00100010496	SMARCA2	100	96.915	ENSBTAG00000007494	SMARCA2	100	96.915	Bos_taurus
ENSHGLG00100010496	SMARCA2	100	95.859	ENSCJAG00000010710	SMARCA2	100	95.859	Callithrix_jacchus
ENSHGLG00100010496	SMARCA2	100	96.917	ENSCAFG00000002013	SMARCA2	100	96.917	Canis_familiaris
ENSHGLG00100010496	SMARCA2	79	94.823	ENSCAFG00020026802	SMARCA2	98	94.823	Canis_lupus_dingo
ENSHGLG00100010496	SMARCA2	100	96.915	ENSCHIG00000025863	SMARCA2	100	96.915	Capra_hircus
ENSHGLG00100010496	SMARCA2	100	95.358	ENSTSYG00000003858	SMARCA2	100	95.358	Carlito_syrichta
ENSHGLG00100010496	SMARCA2	99	92.766	ENSCAPG00000002890	SMARCA2	100	93.338	Cavia_aperea
ENSHGLG00100010496	SMARCA2	100	96.877	ENSCPOG00000005475	SMARCA2	100	96.877	Cavia_porcellus
ENSHGLG00100010496	SMARCA2	100	96.244	ENSCCAG00000030636	SMARCA2	100	96.244	Cebus_capucinus
ENSHGLG00100010496	SMARCA2	100	95.394	ENSCATG00000031470	SMARCA2	100	95.521	Cercocebus_atys
ENSHGLG00100010496	SMARCA2	100	96.696	ENSCLAG00000014484	SMARCA2	100	96.696	Chinchilla_lanigera
ENSHGLG00100010496	SMARCA2	93	95.839	ENSCSAG00000008650	SMARCA2	99	95.839	Chlorocebus_sabaeus
ENSHGLG00100010496	SMARCA2	87	90.535	ENSCHOG00000004316	SMARCA2	87	90.535	Choloepus_hoffmanni
ENSHGLG00100010496	SMARCA2	100	91.233	ENSCPBG00000025463	SMARCA2	100	91.725	Chrysemys_picta_bellii
ENSHGLG00100010496	SMARCA2	100	96.237	ENSCANG00000039597	SMARCA2	100	96.237	Colobus_angolensis_palliatus
ENSHGLG00100010496	SMARCA2	100	89.194	ENSCGRG00001002323	Smarca2	100	89.194	Cricetulus_griseus_chok1gshd
ENSHGLG00100010496	SMARCA2	99	77.706	ENSCSEG00000019311	SMARCA2	97	77.625	Cynoglossus_semilaevis
ENSHGLG00100010496	SMARCA2	84	79.850	ENSCVAG00000016571	SMARCA2	95	79.907	Cyprinodon_variegatus
ENSHGLG00100010496	SMARCA2	100	82.025	ENSDARG00000008904	smarca2	97	82.303	Danio_rerio
ENSHGLG00100010496	SMARCA2	100	95.250	ENSDNOG00000006402	SMARCA2	100	95.250	Dasypus_novemcinctus
ENSHGLG00100010496	SMARCA2	100	96.308	ENSDORG00000014832	Smarca2	100	96.308	Dipodomys_ordii
ENSHGLG00100010496	SMARCA2	80	61.129	FBgn0000212	brm	81	57.876	Drosophila_melanogaster
ENSHGLG00100010496	SMARCA2	86	63.154	ENSEBUG00000002449	-	95	64.645	Eptatretus_burgeri
ENSHGLG00100010496	SMARCA2	94	71.847	ENSEBUG00000011442	-	97	70.904	Eptatretus_burgeri
ENSHGLG00100010496	SMARCA2	100	97.046	ENSEASG00005010312	SMARCA2	100	97.046	Equus_asinus_asinus
ENSHGLG00100010496	SMARCA2	68	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSHGLG00100010496	SMARCA2	92	81.228	ENSELUG00000010318	smarca2	96	79.152	Esox_lucius
ENSHGLG00100010496	SMARCA2	100	95.890	ENSFCAG00000001568	SMARCA2	100	96.146	Felis_catus
ENSHGLG00100010496	SMARCA2	100	90.127	ENSFALG00000010416	SMARCA2	100	91.814	Ficedula_albicollis
ENSHGLG00100010496	SMARCA2	99	95.944	ENSFDAG00000010502	SMARCA2	99	95.944	Fukomys_damarensis
ENSHGLG00100010496	SMARCA2	100	80.943	ENSFHEG00000021250	SMARCA2	97	79.808	Fundulus_heteroclitus
ENSHGLG00100010496	SMARCA2	98	77.771	ENSGMOG00000014229	SMARCA2	97	79.027	Gadus_morhua
ENSHGLG00100010496	SMARCA2	100	91.128	ENSGALG00000010164	SMARCA2	100	91.255	Gallus_gallus
ENSHGLG00100010496	SMARCA2	95	76.181	ENSGAFG00000001164	SMARCA2	89	96.667	Gambusia_affinis
ENSHGLG00100010496	SMARCA2	99	79.427	ENSGACG00000014488	SMARCA2	100	78.635	Gasterosteus_aculeatus
ENSHGLG00100010496	SMARCA2	100	91.481	ENSGAGG00000024412	SMARCA2	100	91.789	Gopherus_agassizii
ENSHGLG00100010496	SMARCA2	99	88.239	ENSGGOG00000000513	SMARCA2	100	92.830	Gorilla_gorilla
ENSHGLG00100010496	SMARCA2	99	81.830	ENSHBUG00000006691	SMARCA2	96	81.560	Haplochromis_burtoni
ENSHGLG00100010496	SMARCA2	100	97.161	ENSHGLG00000005215	SMARCA2	100	97.161	Heterocephalus_glaber_female
ENSHGLG00100010496	SMARCA2	89	76.014	ENSHCOG00000015348	-	97	76.409	Hippocampus_comes
ENSHGLG00100010496	SMARCA2	100	80.911	ENSIPUG00000011060	smarca2	99	81.542	Ictalurus_punctatus
ENSHGLG00100010496	SMARCA2	100	95.997	ENSSTOG00000006812	SMARCA2	100	95.997	Ictidomys_tridecemlineatus
ENSHGLG00100010496	SMARCA2	100	96.181	ENSJJAG00000010867	Smarca2	100	96.181	Jaculus_jaculus
ENSHGLG00100010496	SMARCA2	100	79.677	ENSKMAG00000015844	-	98	79.286	Kryptolebias_marmoratus
ENSHGLG00100010496	SMARCA2	50	72.289	ENSLACG00000000270	SMARCA2	99	73.614	Latimeria_chalumnae
ENSHGLG00100010496	SMARCA2	100	83.770	ENSLOCG00000011499	smarca2	99	83.645	Lepisosteus_oculatus
ENSHGLG00100010496	SMARCA2	100	92.984	ENSLAFG00000014061	SMARCA2	100	92.546	Loxodonta_africana
ENSHGLG00100010496	SMARCA2	100	96.313	ENSMFAG00000003814	SMARCA2	100	96.313	Macaca_fascicularis
ENSHGLG00100010496	SMARCA2	100	96.112	ENSMMUG00000015279	SMARCA2	100	96.112	Macaca_mulatta
ENSHGLG00100010496	SMARCA2	100	95.035	ENSMNEG00000041069	SMARCA2	100	95.417	Macaca_nemestrina
ENSHGLG00100010496	SMARCA2	100	95.391	ENSMLEG00000027418	SMARCA2	100	95.329	Mandrillus_leucophaeus
ENSHGLG00100010496	SMARCA2	98	80.000	ENSMAMG00000003056	SMARCA2	97	81.705	Mastacembelus_armatus
ENSHGLG00100010496	SMARCA2	99	81.990	ENSMZEG00005020709	SMARCA2	96	81.722	Maylandia_zebra
ENSHGLG00100010496	SMARCA2	76	77.955	ENSMGAG00000005160	-	100	76.892	Meleagris_gallopavo
ENSHGLG00100010496	SMARCA2	100	96.481	ENSMICG00000005162	SMARCA2	100	96.481	Microcebus_murinus
ENSHGLG00100010496	SMARCA2	100	95.802	ENSMOCG00000001611	Smarca2	100	95.865	Microtus_ochrogaster
ENSHGLG00100010496	SMARCA2	99	78.751	ENSMMOG00000014196	SMARCA2	97	78.702	Mola_mola
ENSHGLG00100010496	SMARCA2	100	92.961	ENSMODG00000003578	SMARCA2	100	92.961	Monodelphis_domestica
ENSHGLG00100010496	SMARCA2	99	81.429	ENSMALG00000009611	SMARCA2	97	81.217	Monopterus_albus
ENSHGLG00100010496	SMARCA2	100	95.076	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.076	Mus_caroli
ENSHGLG00100010496	SMARCA2	100	95.073	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSHGLG00100010496	SMARCA2	100	95.440	MGP_PahariEiJ_G0014334	Smarca2	100	95.440	Mus_pahari
ENSHGLG00100010496	SMARCA2	100	94.886	MGP_SPRETEiJ_G0023759	Smarca2	99	100.000	Mus_spretus
ENSHGLG00100010496	SMARCA2	82	99.297	ENSMPUG00000005171	SMARCA2	94	99.297	Mustela_putorius_furo
ENSHGLG00100010496	SMARCA2	99	89.391	ENSMLUG00000002342	SMARCA2	99	89.216	Myotis_lucifugus
ENSHGLG00100010496	SMARCA2	99	95.503	ENSNGAG00000000108	Smarca2	99	95.440	Nannospalax_galili
ENSHGLG00100010496	SMARCA2	95	67.971	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSHGLG00100010496	SMARCA2	100	95.142	ENSNLEG00000008575	SMARCA2	100	94.835	Nomascus_leucogenys
ENSHGLG00100010496	SMARCA2	100	86.381	ENSMEUG00000009812	SMARCA2	100	86.573	Notamacropus_eugenii
ENSHGLG00100010496	SMARCA2	100	90.057	ENSOPRG00000013474	SMARCA2	100	90.310	Ochotona_princeps
ENSHGLG00100010496	SMARCA2	99	95.535	ENSODEG00000005452	SMARCA2	99	95.535	Octodon_degus
ENSHGLG00100010496	SMARCA2	99	80.454	ENSONIG00000014163	SMARCA2	97	80.167	Oreochromis_niloticus
ENSHGLG00100010496	SMARCA2	50	94.480	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSHGLG00100010496	SMARCA2	100	95.443	ENSOCUG00000006320	SMARCA2	100	95.443	Oryctolagus_cuniculus
ENSHGLG00100010496	SMARCA2	100	80.252	ENSORLG00000020820	SMARCA2	97	79.781	Oryzias_latipes
ENSHGLG00100010496	SMARCA2	100	79.987	ENSORLG00015006289	SMARCA2	97	79.768	Oryzias_latipes_hsok
ENSHGLG00100010496	SMARCA2	99	82.192	ENSOMEG00000009736	-	97	81.238	Oryzias_melastigma
ENSHGLG00100010496	SMARCA2	99	93.409	ENSOGAG00000017053	SMARCA2	100	92.462	Otolemur_garnettii
ENSHGLG00100010496	SMARCA2	100	95.571	ENSOARG00000013265	SMARCA2	100	95.571	Ovis_aries
ENSHGLG00100010496	SMARCA2	100	93.520	ENSPPAG00000038717	SMARCA2	100	94.948	Pan_paniscus
ENSHGLG00100010496	SMARCA2	100	95.954	ENSPPRG00000001879	SMARCA2	100	96.211	Panthera_pardus
ENSHGLG00100010496	SMARCA2	100	95.426	ENSPTRG00000051168	SMARCA2	100	95.299	Pan_troglodytes
ENSHGLG00100010496	SMARCA2	100	89.503	ENSPANG00000025121	SMARCA2	100	89.779	Papio_anubis
ENSHGLG00100010496	SMARCA2	100	84.013	ENSPKIG00000018469	-	97	83.927	Paramormyrops_kingsleyae
ENSHGLG00100010496	SMARCA2	100	90.449	ENSPSIG00000006284	SMARCA2	100	90.788	Pelodiscus_sinensis
ENSHGLG00100010496	SMARCA2	99	74.775	ENSPMGG00000013696	-	97	75.642	Periophthalmus_magnuspinnatus
ENSHGLG00100010496	SMARCA2	100	95.163	ENSPEMG00000019821	Smarca2	100	95.038	Peromyscus_maniculatus_bairdii
ENSHGLG00100010496	SMARCA2	94	72.505	ENSPMAG00000005337	-	94	72.314	Petromyzon_marinus
ENSHGLG00100010496	SMARCA2	100	94.761	ENSPCIG00000015658	SMARCA2	100	94.955	Phascolarctos_cinereus
ENSHGLG00100010496	SMARCA2	100	79.938	ENSPFOG00000001856	SMARCA2	98	78.776	Poecilia_formosa
ENSHGLG00100010496	SMARCA2	99	79.710	ENSPLAG00000017829	SMARCA2	96	79.068	Poecilia_latipinna
ENSHGLG00100010496	SMARCA2	99	79.760	ENSPMEG00000001815	-	97	78.776	Poecilia_mexicana
ENSHGLG00100010496	SMARCA2	100	79.317	ENSPREG00000013800	SMARCA2	98	78.790	Poecilia_reticulata
ENSHGLG00100010496	SMARCA2	100	95.411	ENSPPYG00000019258	SMARCA2	100	95.475	Pongo_abelii
ENSHGLG00100010496	SMARCA2	76	82.544	ENSPCAG00000016969	SMARCA2	78	83.548	Procavia_capensis
ENSHGLG00100010496	SMARCA2	100	94.062	ENSPCOG00000025709	SMARCA2	100	94.248	Propithecus_coquereli
ENSHGLG00100010496	SMARCA2	91	98.947	ENSPVAG00000000901	SMARCA2	95	98.947	Pteropus_vampyrus
ENSHGLG00100010496	SMARCA2	100	77.107	ENSPNYG00000004533	SMARCA2	97	76.878	Pundamilia_nyererei
ENSHGLG00100010496	SMARCA2	99	83.131	ENSPNAG00000014635	smarca2	99	82.995	Pygocentrus_nattereri
ENSHGLG00100010496	SMARCA2	100	95.116	ENSRNOG00000011931	Smarca2	100	95.116	Rattus_norvegicus
ENSHGLG00100010496	SMARCA2	100	95.734	ENSRBIG00000038618	SMARCA2	100	95.728	Rhinopithecus_bieti
ENSHGLG00100010496	SMARCA2	100	94.953	ENSRROG00000019271	SMARCA2	100	95.079	Rhinopithecus_roxellana
ENSHGLG00100010496	SMARCA2	100	94.942	ENSSBOG00000034827	SMARCA2	100	94.942	Saimiri_boliviensis_boliviensis
ENSHGLG00100010496	SMARCA2	100	92.327	ENSSHAG00000007884	SMARCA2	100	92.200	Sarcophilus_harrisii
ENSHGLG00100010496	SMARCA2	91	84.950	ENSSFOG00015014870	SMARCA2	94	87.321	Scleropages_formosus
ENSHGLG00100010496	SMARCA2	100	80.811	ENSSMAG00000013707	SMARCA2	97	80.637	Scophthalmus_maximus
ENSHGLG00100010496	SMARCA2	98	85.802	ENSSDUG00000008852	-	96	80.628	Seriola_dumerili
ENSHGLG00100010496	SMARCA2	99	79.974	ENSSLDG00000025449	SMARCA2	96	79.610	Seriola_lalandi_dorsalis
ENSHGLG00100010496	SMARCA2	95	97.701	ENSSARG00000007888	SMARCA2	95	97.368	Sorex_araneus
ENSHGLG00100010496	SMARCA2	98	85.243	ENSSPUG00000001629	SMARCA2	98	87.092	Sphenodon_punctatus
ENSHGLG00100010496	SMARCA2	100	80.326	ENSSPAG00000020091	-	97	79.884	Stegastes_partitus
ENSHGLG00100010496	SMARCA2	100	96.787	ENSSSCG00000005232	SMARCA2	100	96.787	Sus_scrofa
ENSHGLG00100010496	SMARCA2	97	89.877	ENSTGUG00000005460	SMARCA2	98	91.033	Taeniopygia_guttata
ENSHGLG00100010496	SMARCA2	99	79.140	ENSTRUG00000015619	SMARCA2	97	79.370	Takifugu_rubripes
ENSHGLG00100010496	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	71	100.000	Tupaia_belangeri
ENSHGLG00100010496	SMARCA2	95	95.643	ENSTTRG00000002033	SMARCA2	95	95.643	Tursiops_truncatus
ENSHGLG00100010496	SMARCA2	89	94.783	ENSUAMG00000024701	SMARCA2	99	94.714	Ursus_americanus
ENSHGLG00100010496	SMARCA2	91	87.803	ENSVPAG00000001204	SMARCA2	100	87.803	Vicugna_pacos
ENSHGLG00100010496	SMARCA2	78	95.830	ENSVVUG00000004598	SMARCA2	99	95.830	Vulpes_vulpes
ENSHGLG00100010496	SMARCA2	100	82.400	ENSXETG00000015299	smarca2	100	81.954	Xenopus_tropicalis
ENSHGLG00100010496	SMARCA2	89	78.884	ENSXCOG00000011073	SMARCA2	97	79.605	Xiphophorus_couchianus
ENSHGLG00100010496	SMARCA2	100	79.107	ENSXMAG00000015611	SMARCA2	99	79.360	Xiphophorus_maculatus